Gene annotation
Transcriptome id Sobic.003G445100.1,Sobic.003G445100.2
Synonym Sb03g047450, GR-RBP3
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1W0W1K9 , C5XJF1
Pfam PF00076
Panther DB PTHR24012
NCBI CDD -
KEGG Orthology K13195; cold-inducible RNA-binding protein
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G61030 : glycine-rich RNA-binding protein 3
RAP-DB (Rice) LOC_Os01g74340.1 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87876
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G445100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G383300 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
2 Sobic.004G175600 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.001G532700 WD repeat-containing protein 44, putative, expressed -
4 Sobic.007G171950 - -
5 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
6 Sobic.007G225800 NOL1/NOP2/sun family protein, putative, expressed K15335: NSUN2, tRNA (cytosine34-C5)-methyltransferase
7 Sobic.004G296500 serine esterase family protein, putative, expressed -
8 Sobic.006G059200 expressed protein K18464: RTSC, WASH complex subunit strumpellin
9 Sobic.007G201650 - -
10 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
12 Sobic.003G196900 esterase/lipase/thioesterase, putative, expressed K06889: uncharacterized protein
13 Sobic.008G131500 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
14 Sobic.007G095500 expressed protein -
15 Sobic.008G136200 spotted leaf 11, putative, expressed -
16 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
17 Sobic.002G346600 transporter family protein, putative, expressed -
18 Sobic.007G194300 sulfite oxidase, putative, expressed K00387: sulfite oxidase
19 Sobic.002G351900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
20 Sobic.008G092532 - -


Gene co-expression network
sample Sobic003G445100 Sobic003G445100 Sobic003G383300 Sobic003G383300 Sobic003G445100--Sobic003G383300 Sobic004G175600 Sobic004G175600 Sobic003G445100--Sobic004G175600 Sobic001G532700 Sobic001G532700 Sobic003G445100--Sobic001G532700 Sobic007G171950 Sobic007G171950 Sobic003G445100--Sobic007G171950 Sobic010G005600 Sobic010G005600 Sobic003G445100--Sobic010G005600 Sobic007G225800 Sobic007G225800 Sobic003G445100--Sobic007G225800 Sobic004G296500 Sobic004G296500 Sobic003G445100--Sobic004G296500 Sobic006G059200 Sobic006G059200 Sobic003G445100--Sobic006G059200 Sobic007G201650 Sobic007G201650 Sobic003G445100--Sobic007G201650 Sobic007G052900 Sobic007G052900 Sobic003G383300--Sobic007G052900 Sobic004G027800 Sobic004G027800 Sobic003G383300--Sobic004G027800 Sobic008G136200 Sobic008G136200 Sobic003G383300--Sobic008G136200 Sobic006G085300 Sobic006G085300 Sobic003G383300--Sobic006G085300 Sobic010G277500 Sobic010G277500 Sobic003G383300--Sobic010G277500 Sobic006G258500 Sobic006G258500 Sobic003G383300--Sobic006G258500 Sobic007G037900 Sobic007G037900 Sobic003G383300--Sobic007G037900 Sobic002G144933 Sobic002G144933 Sobic003G383300--Sobic002G144933 Sobic006G246900 Sobic006G246900 Sobic003G383300--Sobic006G246900 Sobic001G063800 Sobic001G063800 Sobic004G175600--Sobic001G063800 Sobic001G296400 Sobic001G296400 Sobic004G175600--Sobic001G296400 Sobic007G095500 Sobic007G095500 Sobic004G175600--Sobic007G095500 Sobic003G174800 Sobic003G174800 Sobic004G175600--Sobic003G174800 Sobic004G208600 Sobic004G208600 Sobic004G175600--Sobic004G208600 Sobic004G225600 Sobic004G225600 Sobic004G175600--Sobic004G225600 Sobic001G428000 Sobic001G428000 Sobic004G175600--Sobic001G428000 Sobic004G019500 Sobic004G019500 Sobic004G175600--Sobic004G019500 Sobic007G203200 Sobic007G203200 Sobic004G175600--Sobic007G203200 Sobic005G084100 Sobic005G084100 Sobic001G532700--Sobic005G084100 Sobic001G532700--Sobic006G059200 Sobic001G532700--Sobic008G136200 Sobic001G253200 Sobic001G253200 Sobic001G532700--Sobic001G253200 Sobic001G036800 Sobic001G036800 Sobic001G532700--Sobic001G036800 Sobic001G360900 Sobic001G360900 Sobic001G532700--Sobic001G360900 Sobic009G112400 Sobic009G112400 Sobic001G532700--Sobic009G112400 Sobic003G052600 Sobic003G052600 Sobic001G532700--Sobic003G052600 Sobic007G054400 Sobic007G054400 Sobic001G532700--Sobic007G054400 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G171950--Sobic007G095500 Sobic002G122600 Sobic002G122600 Sobic007G171950--Sobic002G122600 Sobic007G171950--Sobic001G296400 Sobic010G108900 Sobic010G108900 Sobic007G171950--Sobic010G108900 Sobic009G207100 Sobic009G207100 Sobic007G171950--Sobic009G207100 Sobic001G263000 Sobic001G263000 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500 Sobic010G005600--Sobic007G052900 Sobic010G176550 Sobic010G176550 Sobic010G005600--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic010G005600--Sobic002G031400 Sobic001G159400 Sobic001G159400 Sobic010G005600--Sobic001G159400 Sobic004G174400 Sobic004G174400 Sobic010G005600--Sobic004G174400 Sobic009G215800 Sobic009G215800 Sobic010G005600--Sobic009G215800 Sobic002G351900 Sobic002G351900 Sobic010G005600--Sobic002G351900 Sobic001G384900 Sobic001G384900 Sobic010G005600--Sobic001G384900 Sobic010G056200 Sobic010G056200 Sobic010G005600--Sobic010G056200 Sobic008G092532 Sobic008G092532 Sobic007G225800--Sobic008G092532 Sobic003G390400 Sobic003G390400 Sobic007G225800--Sobic003G390400 Sobic002G346600 Sobic002G346600 Sobic007G225800--Sobic002G346600 Sobic006G063001 Sobic006G063001 Sobic007G225800--Sobic006G063001 Sobic005G063700 Sobic005G063700 Sobic007G225800--Sobic005G063700 Sobic002G228700 Sobic002G228700 Sobic007G225800--Sobic002G228700 Sobic002G402600 Sobic002G402600 Sobic007G225800--Sobic002G402600 Sobic009G191100 Sobic009G191100 Sobic007G225800--Sobic009G191100 Sobic003G163100 Sobic003G163100 Sobic007G225800--Sobic003G163100 Sobic009G001800 Sobic009G001800 Sobic004G296500--Sobic009G001800 Sobic004G296500--Sobic003G383300 Sobic002G294500 Sobic002G294500 Sobic004G296500--Sobic002G294500 Sobic006G200600 Sobic006G200600 Sobic004G296500--Sobic006G200600 Sobic004G296500--Sobic003G445100 Sobic004G296500--Sobic006G258500 Sobic004G080200 Sobic004G080200 Sobic004G296500--Sobic004G080200 Sobic004G296500--Sobic007G095500 Sobic001G484700 Sobic001G484700 Sobic004G296500--Sobic001G484700 Sobic009G050900 Sobic009G050900 Sobic006G059200--Sobic009G050900 Sobic008G047700 Sobic008G047700 Sobic006G059200--Sobic008G047700 Sobic009G100050 Sobic009G100050 Sobic006G059200--Sobic009G100050 Sobic006G059200--Sobic008G092532 Sobic003G070100 Sobic003G070100 Sobic006G059200--Sobic003G070100 Sobic008G083000 Sobic008G083000 Sobic006G059200--Sobic008G083000 Sobic005G191900 Sobic005G191900 Sobic006G059200--Sobic005G191900 Sobic009G260500 Sobic009G260500 Sobic006G059200--Sobic009G260500 Sobic001G407200 Sobic001G407200 Sobic006G059200--Sobic001G407200 Sobic004G143400 Sobic004G143400 Sobic007G201650--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic007G201650--Sobic009G083300 Sobic001G269300 Sobic001G269300 Sobic007G201650--Sobic001G269300 Sobic007G201650--Sobic003G445100 Sobic006G180432 Sobic006G180432 Sobic007G201650--Sobic006G180432 Sobic007G201650--Sobic001G428000 Sobic005G084000 Sobic005G084000 Sobic007G201650--Sobic005G084000 Sobic008G008500 Sobic008G008500 Sobic007G201650--Sobic008G008500 Sobic008G088000 Sobic008G088000 Sobic007G201650--Sobic008G088000
Octagon: transcription factors


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