Gene annotation
Transcriptome id Sobic.002G346600.3
Synonym Sb02g036920
Functional annotation transporter family protein, putative, expressed
UniProt A0A1W0W707
Pfam PF07690
Panther DB PTHR24064 PTHR24064:SF256
NCBI CDD KOG0253; Synaptic vesicle transporter SV2 (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G13050 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os07g38400.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014953
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G346600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G063300 - -
2 Sobic.007G225800 NOL1/NOP2/sun family protein, putative, expressed K15335: NSUN2, tRNA (cytosine34-C5)-methyltransferase
3 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor
4 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
5 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
6 Sobic.005G212500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
8 Sobic.007G142050 - -
9 Sobic.001G046600 cycloartenol-C-24-methyltransferase 1, putative, expressed -
10 Sobic.003G136800 SNF7 domain containing protein, putative, expressed K15053: charged multivesicular body protein 7
11 Sobic.008G136200 spotted leaf 11, putative, expressed -
12 Sobic.007G094801 - -
13 Sobic.003G204000 expressed protein -
14 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
15 Sobic.003G201750 - -
16 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
17 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
18 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
19 Sobic.006G246900 expressed protein -
20 Sobic.003G006833 - -


Gene co-expression network
sample Sobic002G346600 Sobic002G346600 Sobic006G063300 Sobic006G063300 Sobic002G346600--Sobic006G063300 Sobic007G225800 Sobic007G225800 Sobic002G346600--Sobic007G225800 Sobic003G315332 Sobic003G315332 Sobic002G346600--Sobic003G315332 Sobic002G186000 Sobic002G186000 Sobic002G346600--Sobic002G186000 Sobic002G076400 Sobic002G076400 Sobic002G346600--Sobic002G076400 Sobic005G212500 Sobic005G212500 Sobic002G346600--Sobic005G212500 Sobic004G016500 Sobic004G016500 Sobic002G346600--Sobic004G016500 Sobic007G142050 Sobic007G142050 Sobic002G346600--Sobic007G142050 Sobic001G046600 Sobic001G046600 Sobic002G346600--Sobic001G046600 Sobic004G112500 Sobic004G112500 Sobic006G063300--Sobic004G112500 Sobic006G063300--Sobic007G142050 Sobic001G024200 Sobic001G024200 Sobic006G063300--Sobic001G024200 Sobic007G089600 Sobic007G089600 Sobic006G063300--Sobic007G089600 Sobic001G272000 Sobic001G272000 Sobic006G063300--Sobic001G272000 Sobic008G068800 Sobic008G068800 Sobic006G063300--Sobic008G068800 Sobic006G063300--Sobic002G346600 Sobic003G204000 Sobic003G204000 Sobic006G063300--Sobic003G204000 Sobic009G059600 Sobic009G059600 Sobic006G063300--Sobic009G059600 Sobic008G092532 Sobic008G092532 Sobic007G225800--Sobic008G092532 Sobic003G390400 Sobic003G390400 Sobic007G225800--Sobic003G390400 Sobic007G225800--Sobic002G346600 Sobic006G063001 Sobic006G063001 Sobic007G225800--Sobic006G063001 Sobic005G063700 Sobic005G063700 Sobic007G225800--Sobic005G063700 Sobic002G228700 Sobic002G228700 Sobic007G225800--Sobic002G228700 Sobic002G402600 Sobic002G402600 Sobic007G225800--Sobic002G402600 Sobic009G191100 Sobic009G191100 Sobic007G225800--Sobic009G191100 Sobic003G163100 Sobic003G163100 Sobic007G225800--Sobic003G163100 Sobic004G169501 Sobic004G169501 Sobic003G315332--Sobic004G169501 Sobic003G315332--Sobic007G142050 Sobic003G315332--Sobic002G076400 Sobic003G315332--Sobic008G068800 Sobic006G129700 Sobic006G129700 Sobic003G315332--Sobic006G129700 Sobic001G543900 Sobic001G543900 Sobic003G315332--Sobic001G543900 Sobic010G263800 Sobic010G263800 Sobic003G315332--Sobic010G263800 Sobic003G315332--Sobic003G204000 Sobic003G315332--Sobic007G089600 Sobic003G197800 Sobic003G197800 Sobic002G186000--Sobic003G197800 Sobic002G157000 Sobic002G157000 Sobic002G186000--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G186000--Sobic002G248400 Sobic001G094000 Sobic001G094000 Sobic002G186000--Sobic001G094000 Sobic003G200200 Sobic003G200200 Sobic002G186000--Sobic003G200200 Sobic007G011400 Sobic007G011400 Sobic002G186000--Sobic007G011400 Sobic002G058300 Sobic002G058300 Sobic002G186000--Sobic002G058300 Sobic001G162300 Sobic001G162300 Sobic002G186000--Sobic001G162300 Sobic003G220200 Sobic003G220200 Sobic002G186000--Sobic003G220200 Sobic007G191100 Sobic007G191100 Sobic002G076400--Sobic007G191100 Sobic002G076400--Sobic003G315332 Sobic002G076400--Sobic007G011400 Sobic002G076400--Sobic007G142050 Sobic008G117200 Sobic008G117200 Sobic002G076400--Sobic008G117200 Sobic002G076400--Sobic010G263800 Sobic002G177400 Sobic002G177400 Sobic002G076400--Sobic002G177400 Sobic002G076400--Sobic008G068800 Sobic004G061900 Sobic004G061900 Sobic002G076400--Sobic004G061900 Sobic009G004700 Sobic009G004700 Sobic005G212500--Sobic009G004700 Sobic008G136200 Sobic008G136200 Sobic005G212500--Sobic008G136200 Sobic008G068400 Sobic008G068400 Sobic005G212500--Sobic008G068400 Sobic009G045700 Sobic009G045700 Sobic005G212500--Sobic009G045700 Sobic006G009400 Sobic006G009400 Sobic005G212500--Sobic006G009400 Sobic007G099500 Sobic007G099500 Sobic005G212500--Sobic007G099500 Sobic007G073400 Sobic007G073400 Sobic005G212500--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic005G212500--Sobic003G424100 Sobic002G051450 Sobic002G051450 Sobic005G212500--Sobic002G051450 Sobic004G016500--Sobic001G046600 Sobic002G150766 Sobic002G150766 Sobic004G016500--Sobic002G150766 Sobic002G330400 Sobic002G330400 Sobic004G016500--Sobic002G330400 Sobic008G167300 Sobic008G167300 Sobic004G016500--Sobic008G167300 Sobic004G212800 Sobic004G212800 Sobic004G016500--Sobic004G212800 Sobic003G057800 Sobic003G057800 Sobic004G016500--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic004G016500--Sobic001G479500 Sobic004G164600 Sobic004G164600 Sobic004G016500--Sobic004G164600 Sobic004G016500--Sobic003G424100 Sobic007G142050--Sobic007G089600 Sobic007G142050--Sobic008G068800 Sobic007G142050--Sobic003G315332 Sobic007G142050--Sobic004G169501 Sobic002G124200 Sobic002G124200 Sobic007G142050--Sobic002G124200 Sobic007G142050--Sobic007G073400 Sobic005G001900 Sobic005G001900 Sobic007G142050--Sobic005G001900 Sobic004G076732 Sobic004G076732 Sobic007G142050--Sobic004G076732 Sobic007G142050--Sobic009G059600 Sobic001G046600--Sobic004G016500 Sobic001G046600--Sobic004G212800 Sobic001G046600--Sobic004G164600 Sobic001G046600--Sobic007G073400 Sobic001G046600--Sobic003G424100 Sobic001G046600--Sobic004G112500 Sobic001G046600--Sobic008G167300 Sobic008G157950 Sobic008G157950 Sobic001G046600--Sobic008G157950 Sobic008G176732 Sobic008G176732 Sobic001G046600--Sobic008G176732
Octagon: transcription factors


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