Gene annotation
Transcriptome id Sobic.004G099300.1,Sobic.004G099300.2
Synonym Sb04g008150, TMT2
Functional annotation transporter family protein, putative, expressed
UniProt A0A194YNQ0
Pfam PF07690 PF00083
Panther DB PTHR23500 PTHR23500:SF96
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G35300 : tonoplast monosaccharide transporter2
RAP-DB (Rice) LOC_Os02g13560.3,LOC_Os02g13560.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020115
Brachypodium KQJ94129 , KQJ94130
Barley -
Wheat TraesCS6B02G215800 , TraesCS6A02G188700 , TraesCS6D02G177400
Populus PNT38760 , PNT47106 , PNT47104 , PNT47105


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cDNA sequences
Sobic.004G099300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G281000 methyltransferase, putative, expressed -
2 Sobic.001G466900 expressed protein -
3 Sobic.010G186700 glycosyl hydrolases family 17, putative, expressed -
4 Sobic.001G119800 expressed protein -
5 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
6 Sobic.K041900 expressed protein -
7 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
8 Sobic.009G070950 - -
9 Sobic.009G125900 expressed protein -
10 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
11 Sobic.007G203000 RNA pseudouridine synthase, putative, expressed -
12 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
14 Sobic.003G389300 cyclin-related protein, putative, expressed -
15 Sobic.004G350000 Citrate transporter protein, putative, expressed -
16 Sobic.002G427300 protein phosphotase protein, putative, expressed -
17 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.006G112100 expressed protein -
19 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
20 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic004G099300 Sobic004G099300 Sobic006G281000 Sobic006G281000 Sobic004G099300--Sobic006G281000 Sobic001G466900 Sobic001G466900 Sobic004G099300--Sobic001G466900 Sobic010G186700 Sobic010G186700 Sobic004G099300--Sobic010G186700 Sobic001G119800 Sobic001G119800 Sobic004G099300--Sobic001G119800 Sobic008G135200 Sobic008G135200 Sobic004G099300--Sobic008G135200 SobicK041900 SobicK041900 Sobic004G099300--SobicK041900 Sobic010G059200 Sobic010G059200 Sobic004G099300--Sobic010G059200 Sobic009G070950 Sobic009G070950 Sobic004G099300--Sobic009G070950 Sobic009G125900 Sobic009G125900 Sobic004G099300--Sobic009G125900 Sobic003G314700 Sobic003G314700 Sobic006G281000--Sobic003G314700 Sobic002G427300 Sobic002G427300 Sobic006G281000--Sobic002G427300 Sobic003G389300 Sobic003G389300 Sobic006G281000--Sobic003G389300 Sobic003G275000 Sobic003G275000 Sobic006G281000--Sobic003G275000 Sobic002G327000 Sobic002G327000 Sobic006G281000--Sobic002G327000 Sobic009G105900 Sobic009G105900 Sobic006G281000--Sobic009G105900 Sobic006G208400 Sobic006G208400 Sobic006G281000--Sobic006G208400 Sobic006G281000--Sobic008G135200 Sobic006G281000--Sobic001G119800 Sobic004G055500 Sobic004G055500 Sobic001G466900--Sobic004G055500 Sobic006G091300 Sobic006G091300 Sobic001G466900--Sobic006G091300 Sobic004G301200 Sobic004G301200 Sobic001G466900--Sobic004G301200 Sobic001G402500 Sobic001G402500 Sobic001G466900--Sobic001G402500 Sobic004G327800 Sobic004G327800 Sobic001G466900--Sobic004G327800 Sobic007G208300 Sobic007G208300 Sobic001G466900--Sobic007G208300 Sobic004G144400 Sobic004G144400 Sobic001G466900--Sobic004G144400 Sobic001G291900 Sobic001G291900 Sobic001G466900--Sobic001G291900 Sobic010G080300 Sobic010G080300 Sobic001G466900--Sobic010G080300 Sobic003G298600 Sobic003G298600 Sobic010G186700--Sobic003G298600 Sobic003G339700 Sobic003G339700 Sobic010G186700--Sobic003G339700 Sobic001G361300 Sobic001G361300 Sobic010G186700--Sobic001G361300 Sobic001G178300 Sobic001G178300 Sobic010G186700--Sobic001G178300 Sobic004G131800 Sobic004G131800 Sobic010G186700--Sobic004G131800 Sobic006G066800 Sobic006G066800 Sobic010G186700--Sobic006G066800 Sobic001G057700 Sobic001G057700 Sobic010G186700--Sobic001G057700 Sobic007G146400 Sobic007G146400 Sobic010G186700--Sobic007G146400 Sobic010G186700--Sobic001G466900 Sobic008G015200 Sobic008G015200 Sobic001G119800--Sobic008G015200 Sobic001G119800--Sobic002G427300 Sobic001G119800--Sobic003G389300 Sobic006G112100 Sobic006G112100 Sobic001G119800--Sobic006G112100 Sobic003G435500 Sobic003G435500 Sobic001G119800--Sobic003G435500 Sobic001G119800--Sobic003G314700 Sobic001G119800--Sobic006G281000 Sobic001G385400 Sobic001G385400 Sobic001G119800--Sobic001G385400 Sobic006G156300 Sobic006G156300 Sobic001G119800--Sobic006G156300 Sobic002G020700 Sobic002G020700 Sobic008G135200--Sobic002G020700 Sobic009G045900 Sobic009G045900 Sobic008G135200--Sobic009G045900 Sobic006G073200 Sobic006G073200 Sobic008G135200--Sobic006G073200 Sobic008G157200 Sobic008G157200 Sobic008G135200--Sobic008G157200 Sobic002G350600 Sobic002G350600 Sobic008G135200--Sobic002G350600 Sobic001G251100 Sobic001G251100 Sobic008G135200--Sobic001G251100 Sobic003G029600 Sobic003G029600 Sobic008G135200--Sobic003G029600 Sobic008G033500 Sobic008G033500 Sobic008G135200--Sobic008G033500 Sobic007G054800 Sobic007G054800 Sobic008G135200--Sobic007G054800 Sobic009G063400 Sobic009G063400 SobicK041900--Sobic009G063400 Sobic001G437500 Sobic001G437500 SobicK041900--Sobic001G437500 SobicK041900--Sobic009G125900 Sobic010G090500 Sobic010G090500 SobicK041900--Sobic010G090500 Sobic001G183600 Sobic001G183600 SobicK041900--Sobic001G183600 Sobic001G159800 Sobic001G159800 SobicK041900--Sobic001G159800 Sobic004G243800 Sobic004G243800 SobicK041900--Sobic004G243800 Sobic001G037400 Sobic001G037400 SobicK041900--Sobic001G037400 Sobic003G017500 Sobic003G017500 SobicK041900--Sobic003G017500 Sobic009G124000 Sobic009G124000 Sobic010G059200--Sobic009G124000 Sobic003G165800 Sobic003G165800 Sobic010G059200--Sobic003G165800 Sobic004G124100 Sobic004G124100 Sobic010G059200--Sobic004G124100 Sobic003G420900 Sobic003G420900 Sobic010G059200--Sobic003G420900 Sobic010G123300 Sobic010G123300 Sobic010G059200--Sobic010G123300 Sobic002G301200 Sobic002G301200 Sobic010G059200--Sobic002G301200 Sobic004G296800 Sobic004G296800 Sobic010G059200--Sobic004G296800 Sobic001G376700 Sobic001G376700 Sobic010G059200--Sobic001G376700 Sobic001G408800 Sobic001G408800 Sobic010G059200--Sobic001G408800 Sobic003G085000 Sobic003G085000 Sobic009G070950--Sobic003G085000 Sobic009G070950--Sobic004G301200 Sobic007G029100 Sobic007G029100 Sobic009G070950--Sobic007G029100 Sobic009G070950--Sobic004G055500 Sobic002G116800 Sobic002G116800 Sobic009G070950--Sobic002G116800 Sobic001G067300 Sobic001G067300 Sobic009G070950--Sobic001G067300 Sobic004G350000 Sobic004G350000 Sobic009G070950--Sobic004G350000 Sobic009G070950--Sobic010G080300 Sobic003G332100 Sobic003G332100 Sobic009G070950--Sobic003G332100 Sobic009G125900--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic009G125900--Sobic009G026101 Sobic002G075500 Sobic002G075500 Sobic009G125900--Sobic002G075500 Sobic002G118700 Sobic002G118700 Sobic009G125900--Sobic002G118700 Sobic009G125900--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic009G125900--Sobic004G265600 Sobic010G096100 Sobic010G096100 Sobic009G125900--Sobic010G096100 Sobic004G051300 Sobic004G051300 Sobic009G125900--Sobic004G051300 Sobic003G254700 Sobic003G254700 Sobic009G125900--Sobic003G254700
Octagon: transcription factors


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