Gene annotation
Transcriptome id Sobic.010G186700.2,Sobic.010G186700.3,Sobic.010G186700.1
Synonym Sb10g023710
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt A0A194YL73 , C5Z5P7
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G26600 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os06g40490.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a051328
Brachypodium KQK17742 , KQK17741
Barley HORVU0Hr1G021950.1 , HORVU0Hr1G021950.3 , HORVU0Hr1G021950.2 , HORVU0Hr1G021950.5 , HORVU0Hr1G021950.4 , HORVU0Hr1G021950.6
Wheat TraesCS7A02G378100 , TraesCS7D02G374900 , TraesCS7B02G279900 , TraesCS7B02G279900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
2 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.001G361300 CDPK - calcium/calmodulin dependent serine/threonine protein kinase 1(PubMedID : 31721651)@CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.001G178300 DNA-binding protein, putative, expressed -
5 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
6 Sobic.006G066800 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
7 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
9 Sobic.001G466900 expressed protein -
10 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
11 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
12 Sobic.002G302900 calmodulin-binding heat-shock protein, putative, expressed -
13 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
14 Sobic.006G068350 - -
15 Sobic.006G091600 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
17 Sobic.004G243600 AAA-type ATPase family protein, putative, expressed -
18 Sobic.002G322000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.007G030800 expressed protein -
20 Sobic.004G099300 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic010G186700 Sobic010G186700 Sobic003G298600 Sobic003G298600 Sobic010G186700--Sobic003G298600 Sobic003G339700 Sobic003G339700 Sobic010G186700--Sobic003G339700 Sobic001G361300 Sobic001G361300 Sobic010G186700--Sobic001G361300 Sobic001G178300 Sobic001G178300 Sobic010G186700--Sobic001G178300 Sobic004G131800 Sobic004G131800 Sobic010G186700--Sobic004G131800 Sobic006G066800 Sobic006G066800 Sobic010G186700--Sobic006G066800 Sobic001G057700 Sobic001G057700 Sobic010G186700--Sobic001G057700 Sobic007G146400 Sobic007G146400 Sobic010G186700--Sobic007G146400 Sobic001G466900 Sobic001G466900 Sobic010G186700--Sobic001G466900 Sobic005G087900 Sobic005G087900 Sobic003G298600--Sobic005G087900 Sobic003G298600--Sobic003G339700 Sobic003G298600--Sobic007G146400 Sobic002G211800 Sobic002G211800 Sobic003G298600--Sobic002G211800 Sobic003G362600 Sobic003G362600 Sobic003G298600--Sobic003G362600 Sobic009G066900 Sobic009G066900 Sobic003G298600--Sobic009G066900 Sobic003G298600--Sobic010G186700 Sobic001G251200 Sobic001G251200 Sobic003G298600--Sobic001G251200 Sobic002G110300 Sobic002G110300 Sobic003G298600--Sobic002G110300 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G381700 Sobic003G381700 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic003G339700--Sobic006G066800 Sobic007G165900 Sobic007G165900 Sobic001G361300--Sobic007G165900 Sobic004G316700 Sobic004G316700 Sobic001G361300--Sobic004G316700 Sobic006G261400 Sobic006G261400 Sobic001G361300--Sobic006G261400 Sobic006G250300 Sobic006G250300 Sobic001G361300--Sobic006G250300 Sobic001G456300 Sobic001G456300 Sobic001G361300--Sobic001G456300 Sobic010G009800 Sobic010G009800 Sobic001G361300--Sobic010G009800 Sobic004G286500 Sobic004G286500 Sobic001G361300--Sobic004G286500 Sobic003G104000 Sobic003G104000 Sobic001G361300--Sobic003G104000 Sobic001G051700 Sobic001G051700 Sobic001G361300--Sobic001G051700 Sobic002G256700 Sobic002G256700 Sobic001G178300--Sobic002G256700 Sobic008G002300 Sobic008G002300 Sobic001G178300--Sobic008G002300 Sobic001G178300--Sobic006G250300 Sobic001G178300--Sobic004G131800 Sobic001G493700 Sobic001G493700 Sobic001G178300--Sobic001G493700 Sobic006G088200 Sobic006G088200 Sobic001G178300--Sobic006G088200 Sobic001G275300 Sobic001G275300 Sobic001G178300--Sobic001G275300 Sobic006G056700 Sobic006G056700 Sobic001G178300--Sobic006G056700 Sobic001G537500 Sobic001G537500 Sobic001G178300--Sobic001G537500 Sobic003G176000 Sobic003G176000 Sobic004G131800--Sobic003G176000 Sobic004G131800--Sobic002G211800 Sobic002G170200 Sobic002G170200 Sobic004G131800--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic004G131800--Sobic006G127600 Sobic010G032900 Sobic010G032900 Sobic004G131800--Sobic010G032900 Sobic002G344000 Sobic002G344000 Sobic004G131800--Sobic002G344000 Sobic004G131800--Sobic006G056700 Sobic004G131800--Sobic001G178300 Sobic002G294800 Sobic002G294800 Sobic004G131800--Sobic002G294800 Sobic002G322000 Sobic002G322000 Sobic006G066800--Sobic002G322000 Sobic010G047700 Sobic010G047700 Sobic006G066800--Sobic010G047700 Sobic004G206100 Sobic004G206100 Sobic006G066800--Sobic004G206100 Sobic004G269800 Sobic004G269800 Sobic006G066800--Sobic004G269800 Sobic001G015200 Sobic001G015200 Sobic006G066800--Sobic001G015200 Sobic008G088821 Sobic008G088821 Sobic006G066800--Sobic008G088821 Sobic006G140500 Sobic006G140500 Sobic006G066800--Sobic006G140500 Sobic004G305900 Sobic004G305900 Sobic006G066800--Sobic004G305900 Sobic002G159100 Sobic002G159100 Sobic006G066800--Sobic002G159100 Sobic001G057700--Sobic007G146400 Sobic001G057700--Sobic003G381700 Sobic003G051000 Sobic003G051000 Sobic001G057700--Sobic003G051000 Sobic003G264800 Sobic003G264800 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic001G057700--Sobic008G187100 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic005G132000 Sobic005G132000 Sobic001G057700--Sobic005G132000 Sobic007G146400--Sobic001G057700 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic007G146400--Sobic003G339700 Sobic007G146400--Sobic002G417300 Sobic004G055500 Sobic004G055500 Sobic001G466900--Sobic004G055500 Sobic006G091300 Sobic006G091300 Sobic001G466900--Sobic006G091300 Sobic004G301200 Sobic004G301200 Sobic001G466900--Sobic004G301200 Sobic001G402500 Sobic001G402500 Sobic001G466900--Sobic001G402500 Sobic004G327800 Sobic004G327800 Sobic001G466900--Sobic004G327800 Sobic007G208300 Sobic007G208300 Sobic001G466900--Sobic007G208300 Sobic004G144400 Sobic004G144400 Sobic001G466900--Sobic004G144400 Sobic001G291900 Sobic001G291900 Sobic001G466900--Sobic001G291900 Sobic010G080300 Sobic010G080300 Sobic001G466900--Sobic010G080300
Octagon: transcription factors


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