Gene annotation
Transcriptome id Sobic.002G302900.1
Synonym Sb02g033330
Functional annotation calmodulin-binding heat-shock protein, putative, expressed
UniProt C5X8K3
Pfam PF03893 PF01764
Panther DB PTHR21493 PTHR21493:SF112
NCBI CDD KOG2088; Predicted lipase/calmodulin-binding heat-shock protein
KEGG Orthology -
Gene Ontology GO:0016042; lipid catabolic process GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G49050 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g14490.2 : calmodulin-binding heat-shock protein, putative, expressed
MaizeGDB (Corn) Zm00025a048039
Brachypodium KQK16244
Barley HORVU6Hr1G021540.1 , HORVU6Hr1G021540.2 , HORVU6Hr1G021540.3 , HORVU6Hr1G021540.4 , HORVU6Hr1G021540.5 , HORVU6Hr1G021540.7 , HORVU6Hr1G021540.8 , HORVU6Hr1G021540.9 , HORVU6Hr1G021540.18 , HORVU6Hr1G021540.19 , HORVU6Hr1G021540.12 , HORVU6Hr1G021540.13 , HORVU6Hr1G021540.10 , HORVU6Hr1G021540.11 , HORVU6Hr1G021540.16 , HORVU6Hr1G021540.17 , HORVU6Hr1G021540.14 , HORVU6Hr1G021540.15
Wheat TraesCS6D02G108200 , TraesCS6D02G108200 , TraesCS6D02G108200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
2 Sobic.002G052700 cyclophilin, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
3 Sobic.002G039800 EDM2, putative, expressed -
4 Sobic.001G051700 expressed protein -
5 Sobic.001G384000 expressed protein -
6 Sobic.002G048700 BT1 family protein, putative, expressed -
7 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
8 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
9 Sobic.010G186700 glycosyl hydrolases family 17, putative, expressed -
10 Sobic.010G009800 OsFBX182 - F-box domain containing protein, expressed -
11 Sobic.002G362800 formin-like protein 20, putative, expressed K02184: formin 2
12 Sobic.001G456300 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
13 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
14 Sobic.009G126300 RING E3 ligase protein, putative, expressed K16279: E3 ubiquitin-protein ligase KEG
15 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
16 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
17 Sobic.001G361300 CDPK - calcium/calmodulin dependent serine/threonine protein kinase 1(PubMedID : 31721651)@CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.001G178300 DNA-binding protein, putative, expressed -
19 Sobic.001G393900 FAD binding domain containing protein, expressed -
20 Sobic.010G262100 expressed protein -


Gene co-expression network
sample Sobic002G302900 Sobic002G302900 Sobic006G267600 Sobic006G267600 Sobic002G302900--Sobic006G267600 Sobic002G052700 Sobic002G052700 Sobic002G302900--Sobic002G052700 Sobic002G039800 Sobic002G039800 Sobic002G302900--Sobic002G039800 Sobic001G051700 Sobic001G051700 Sobic002G302900--Sobic001G051700 Sobic001G384000 Sobic001G384000 Sobic002G302900--Sobic001G384000 Sobic002G048700 Sobic002G048700 Sobic002G302900--Sobic002G048700 Sobic007G168300 Sobic007G168300 Sobic002G302900--Sobic007G168300 Sobic003G042400 Sobic003G042400 Sobic002G302900--Sobic003G042400 Sobic010G186700 Sobic010G186700 Sobic002G302900--Sobic010G186700 Sobic006G261400 Sobic006G261400 Sobic006G267600--Sobic006G261400 Sobic006G267600--Sobic001G051700 Sobic001G393900 Sobic001G393900 Sobic006G267600--Sobic001G393900 Sobic002G154000 Sobic002G154000 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic003G416700 Sobic003G416700 Sobic006G267600--Sobic003G416700 Sobic001G251100 Sobic001G251100 Sobic002G052700--Sobic001G251100 Sobic004G357400 Sobic004G357400 Sobic002G052700--Sobic004G357400 Sobic002G052700--Sobic003G042400 Sobic004G321700 Sobic004G321700 Sobic002G052700--Sobic004G321700 Sobic002G052700--Sobic001G393900 Sobic001G003500 Sobic001G003500 Sobic002G052700--Sobic001G003500 Sobic001G052400 Sobic001G052400 Sobic002G052700--Sobic001G052400 Sobic003G379200 Sobic003G379200 Sobic002G052700--Sobic003G379200 Sobic008G147200 Sobic008G147200 Sobic002G052700--Sobic008G147200 Sobic010G262100 Sobic010G262100 Sobic002G039800--Sobic010G262100 Sobic008G063600 Sobic008G063600 Sobic002G039800--Sobic008G063600 Sobic002G039800--Sobic002G052700 Sobic003G435500 Sobic003G435500 Sobic002G039800--Sobic003G435500 Sobic003G123100 Sobic003G123100 Sobic002G039800--Sobic003G123100 Sobic010G188000 Sobic010G188000 Sobic002G039800--Sobic010G188000 Sobic004G038100 Sobic004G038100 Sobic002G039800--Sobic004G038100 Sobic010G138900 Sobic010G138900 Sobic002G039800--Sobic010G138900 Sobic001G397800 Sobic001G397800 Sobic002G039800--Sobic001G397800 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic001G051700--Sobic006G267600 Sobic001G051700--Sobic002G154000 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic005G200900 Sobic005G200900 Sobic001G384000--Sobic005G200900 Sobic001G196500 Sobic001G196500 Sobic001G384000--Sobic001G196500 Sobic006G138000 Sobic006G138000 Sobic001G384000--Sobic006G138000 Sobic001G384000--Sobic007G168300 Sobic001G384000--Sobic006G261400 Sobic002G362800 Sobic002G362800 Sobic001G384000--Sobic002G362800 Sobic001G457900 Sobic001G457900 Sobic001G384000--Sobic001G457900 Sobic007G051700 Sobic007G051700 Sobic001G384000--Sobic007G051700 Sobic001G111600 Sobic001G111600 Sobic001G384000--Sobic001G111600 Sobic002G048700--Sobic006G261400 Sobic002G048700--Sobic006G267600 Sobic002G048700--Sobic001G051700 Sobic002G048700--Sobic003G416700 Sobic004G040200 Sobic004G040200 Sobic002G048700--Sobic004G040200 Sobic002G425500 Sobic002G425500 Sobic002G048700--Sobic002G425500 Sobic002G048700--Sobic001G111600 Sobic007G183900 Sobic007G183900 Sobic002G048700--Sobic007G183900 Sobic008G002500 Sobic008G002500 Sobic002G048700--Sobic008G002500 Sobic007G168300--Sobic003G042400 Sobic005G200800 Sobic005G200800 Sobic007G168300--Sobic005G200800 Sobic010G001100 Sobic010G001100 Sobic007G168300--Sobic010G001100 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic007G168300--Sobic005G200900 Sobic003G042400--Sobic007G168300 Sobic003G042400--Sobic001G376900 Sobic001G346900 Sobic001G346900 Sobic003G042400--Sobic001G346900 Sobic003G042400--Sobic009G158100 Sobic001G145400 Sobic001G145400 Sobic003G042400--Sobic001G145400 Sobic003G042400--Sobic001G052400 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic007G126500 Sobic007G126500 Sobic003G042400--Sobic007G126500 Sobic003G298600 Sobic003G298600 Sobic010G186700--Sobic003G298600 Sobic003G339700 Sobic003G339700 Sobic010G186700--Sobic003G339700 Sobic001G361300 Sobic001G361300 Sobic010G186700--Sobic001G361300 Sobic001G178300 Sobic001G178300 Sobic010G186700--Sobic001G178300 Sobic004G131800 Sobic004G131800 Sobic010G186700--Sobic004G131800 Sobic006G066800 Sobic006G066800 Sobic010G186700--Sobic006G066800 Sobic001G057700 Sobic001G057700 Sobic010G186700--Sobic001G057700 Sobic007G146400 Sobic007G146400 Sobic010G186700--Sobic007G146400 Sobic001G466900 Sobic001G466900 Sobic010G186700--Sobic001G466900
Octagon: transcription factors


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