Gene annotation
Transcriptome id Sobic.004G132900.1
Synonym
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt A0A194YPD5
Pfam PF00612
Panther DB PTHR32295 PTHR32295:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49260 : IQ-domain 21
RAP-DB (Rice) LOC_Os02g19640.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a019772
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G216600 expressed protein -
2 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
3 Sobic.004G170900 expressed protein -
4 Sobic.002G016400 monocopper oxidase, putative, expressed -
5 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.006G219100 expressed protein -
9 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
11 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.008G093600 expressed protein -
14 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
15 Sobic.007G063100 kinesin-like protein, identical, putative, expressed -
16 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.002G278200 thaumatin, putative, expressed -
18 Sobic.002G229700 expressed protein -
19 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -


Gene co-expression network
sample Sobic004G132900 Sobic004G132900 Sobic010G216600 Sobic010G216600 Sobic004G132900--Sobic010G216600 Sobic007G225400 Sobic007G225400 Sobic004G132900--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic004G132900--Sobic004G170900 Sobic002G016400 Sobic002G016400 Sobic004G132900--Sobic002G016400 Sobic005G047100 Sobic005G047100 Sobic004G132900--Sobic005G047100 Sobic003G116100 Sobic003G116100 Sobic004G132900--Sobic003G116100 Sobic006G149300 Sobic006G149300 Sobic004G132900--Sobic006G149300 Sobic006G219100 Sobic006G219100 Sobic004G132900--Sobic006G219100 Sobic003G418300 Sobic003G418300 Sobic004G132900--Sobic003G418300 Sobic003G338200 Sobic003G338200 Sobic010G216600--Sobic003G338200 Sobic010G216600--Sobic004G170900 Sobic010G216600--Sobic007G225400 Sobic010G111200 Sobic010G111200 Sobic010G216600--Sobic010G111200 Sobic002G419200 Sobic002G419200 Sobic010G216600--Sobic002G419200 Sobic003G277200 Sobic003G277200 Sobic010G216600--Sobic003G277200 Sobic010G216600--Sobic002G016400 Sobic010G216600--Sobic003G116100 Sobic001G382700 Sobic001G382700 Sobic010G216600--Sobic001G382700 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic007G225400--Sobic010G216600 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic004G170900--Sobic007G225400 Sobic004G170900--Sobic010G216600 Sobic004G170900--Sobic005G047100 Sobic006G054600 Sobic006G054600 Sobic004G170900--Sobic006G054600 Sobic009G242501 Sobic009G242501 Sobic004G170900--Sobic009G242501 Sobic002G224200 Sobic002G224200 Sobic004G170900--Sobic002G224200 Sobic002G280300 Sobic002G280300 Sobic004G170900--Sobic002G280300 Sobic004G156900 Sobic004G156900 Sobic004G170900--Sobic004G156900 Sobic009G021700 Sobic009G021700 Sobic004G170900--Sobic009G021700 Sobic002G016400--Sobic005G098400 Sobic002G016400--Sobic003G418300 Sobic007G050500 Sobic007G050500 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic001G345200 Sobic001G345200 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic002G016400--Sobic006G149300 Sobic002G016400--Sobic001G382700 Sobic008G170400 Sobic008G170400 Sobic002G016400--Sobic008G170400 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic005G047100--Sobic007G225400 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic003G116100--Sobic002G419200 Sobic007G094200 Sobic007G094200 Sobic003G116100--Sobic007G094200 Sobic003G116100--Sobic003G338200 Sobic003G116100--Sobic006G219100 Sobic006G044200 Sobic006G044200 Sobic003G116100--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic003G116100--Sobic001G488400 Sobic003G116100--Sobic003G277200 Sobic003G300400 Sobic003G300400 Sobic003G116100--Sobic003G300400 Sobic008G187400 Sobic008G187400 Sobic003G116100--Sobic008G187400 Sobic006G149300--Sobic002G016400 Sobic006G149300--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic006G149300--Sobic010G104400 Sobic005G231300 Sobic005G231300 Sobic006G149300--Sobic005G231300 Sobic006G149300--Sobic005G098400 Sobic006G149300--Sobic002G226500 Sobic002G278200 Sobic002G278200 Sobic006G149300--Sobic002G278200 Sobic007G120301 Sobic007G120301 Sobic006G149300--Sobic007G120301 Sobic007G018100 Sobic007G018100 Sobic006G149300--Sobic007G018100 Sobic006G219100--Sobic007G094200 Sobic004G215000 Sobic004G215000 Sobic006G219100--Sobic004G215000 Sobic001G179400 Sobic001G179400 Sobic006G219100--Sobic001G179400 Sobic004G227900 Sobic004G227900 Sobic006G219100--Sobic004G227900 Sobic008G154700 Sobic008G154700 Sobic006G219100--Sobic008G154700 Sobic006G219100--Sobic003G116100 Sobic010G027700 Sobic010G027700 Sobic006G219100--Sobic010G027700 Sobic002G068400 Sobic002G068400 Sobic006G219100--Sobic002G068400 Sobic004G342000 Sobic004G342000 Sobic006G219100--Sobic004G342000 Sobic003G418300--Sobic002G016400 Sobic003G418300--Sobic005G098400 Sobic003G418300--Sobic001G345200 Sobic003G418300--Sobic003G338200 Sobic003G418300--Sobic008G170400 Sobic003G418300--Sobic007G094200 Sobic005G231400 Sobic005G231400 Sobic003G418300--Sobic005G231400 Sobic003G418300--Sobic010G216600 Sobic003G418300--Sobic008G187400
Octagon: transcription factors


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