Gene annotation
Transcriptome id Sobic.004G171100.1
Synonym Sb04g022230
Functional annotation expressed protein
UniProt C5XU46
Pfam PF14360
Panther DB PTHR21290 PTHR21290:SF32
NCBI CDD KOG3058; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G43580 : Sphingomyelin synthetase family protein
RAP-DB (Rice) LOC_Os04g34620.1 : expressed protein
MaizeGDB (Corn) Zm00025a020606
Brachypodium KQJ99810 , KQJ99809 , PNT68798 , PNT68796 , PNT68797
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G032000 - -
2 Sobic.010G257800 peptidyl-prolyl cis-trans isomerase, putative, expressed -
3 Sobic.010G271600 exo70 exocyst complex subunit family protein, putative, expressed -
4 Sobic.009G098400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
5 Sobic.004G187400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
6 Sobic.010G190500 - -
7 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
8 Sobic.005G214700 - -
9 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
10 Sobic.008G102850 - -
11 Sobic.002G125100 - -
12 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
13 Sobic.002G128700 expressed protein -
14 Sobic.004G295050 - -
15 Sobic.002G384500 expressed protein -
16 Sobic.001G135950 - -
17 Sobic.007G007700 OsFBL38 - F-box domain and LRR containing protein, expressed -
18 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.002G061300 OsFBX239 - F-box domain containing protein, expressed -
20 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G171100 Sobic004G171100 Sobic006G032000 Sobic006G032000 Sobic004G171100--Sobic006G032000 Sobic010G257800 Sobic010G257800 Sobic004G171100--Sobic010G257800 Sobic010G271600 Sobic010G271600 Sobic004G171100--Sobic010G271600 Sobic009G098400 Sobic009G098400 Sobic004G171100--Sobic009G098400 Sobic004G187400 Sobic004G187400 Sobic004G171100--Sobic004G187400 Sobic010G190500 Sobic010G190500 Sobic004G171100--Sobic010G190500 Sobic002G279900 Sobic002G279900 Sobic004G171100--Sobic002G279900 Sobic005G214700 Sobic005G214700 Sobic004G171100--Sobic005G214700 Sobic006G173400 Sobic006G173400 Sobic004G171100--Sobic006G173400 Sobic006G032000--Sobic009G098400 Sobic006G032000--Sobic005G214700 Sobic006G032000--Sobic004G187400 Sobic006G032000--Sobic010G271600 Sobic006G032000--Sobic010G190500 Sobic008G102850 Sobic008G102850 Sobic006G032000--Sobic008G102850 Sobic002G417401 Sobic002G417401 Sobic006G032000--Sobic002G417401 Sobic006G022700 Sobic006G022700 Sobic006G032000--Sobic006G022700 Sobic009G090400 Sobic009G090400 Sobic006G032000--Sobic009G090400 Sobic010G257800--Sobic010G271600 Sobic010G257800--Sobic006G173400 Sobic002G128700 Sobic002G128700 Sobic010G257800--Sobic002G128700 Sobic010G257800--Sobic004G187400 Sobic010G257800--Sobic009G098400 Sobic010G257800--Sobic008G102850 Sobic010G257800--Sobic010G190500 Sobic009G253700 Sobic009G253700 Sobic010G257800--Sobic009G253700 Sobic010G257800--Sobic005G214700 Sobic010G271600--Sobic009G098400 Sobic010G271600--Sobic004G187400 Sobic010G271600--Sobic005G214700 Sobic010G271600--Sobic010G190500 Sobic010G271600--Sobic008G102850 Sobic010G271600--Sobic006G173400 Sobic005G065300 Sobic005G065300 Sobic010G271600--Sobic005G065300 Sobic007G103000 Sobic007G103000 Sobic010G271600--Sobic007G103000 Sobic002G304300 Sobic002G304300 Sobic010G271600--Sobic002G304300 Sobic009G098400--Sobic004G187400 Sobic009G098400--Sobic010G271600 Sobic009G098400--Sobic005G214700 Sobic009G098400--Sobic010G190500 Sobic009G098400--Sobic006G022700 Sobic009G098400--Sobic008G102850 Sobic009G098400--Sobic002G304300 Sobic003G009600 Sobic003G009600 Sobic009G098400--Sobic003G009600 Sobic006G215500 Sobic006G215500 Sobic009G098400--Sobic006G215500 Sobic004G187400--Sobic009G098400 Sobic004G187400--Sobic010G271600 Sobic004G187400--Sobic005G214700 Sobic004G187400--Sobic006G022700 Sobic004G187400--Sobic010G190500 Sobic004G187400--Sobic008G102850 Sobic004G187400--Sobic002G304300 Sobic003G405800 Sobic003G405800 Sobic004G187400--Sobic003G405800 Sobic004G187400--Sobic006G173400 Sobic010G190500--Sobic005G214700 Sobic007G222200 Sobic007G222200 Sobic010G190500--Sobic007G222200 Sobic005G122100 Sobic005G122100 Sobic010G190500--Sobic005G122100 Sobic010G190500--Sobic009G090400 Sobic010G190500--Sobic003G009600 Sobic010G190500--Sobic007G103000 Sobic010G190500--Sobic010G271600 Sobic010G190500--Sobic002G417401 Sobic010G190500--Sobic008G102850 Sobic001G135950 Sobic001G135950 Sobic002G279900--Sobic001G135950 Sobic002G125100 Sobic002G125100 Sobic002G279900--Sobic002G125100 Sobic004G071900 Sobic004G071900 Sobic002G279900--Sobic004G071900 Sobic002G279900--Sobic006G215500 Sobic010G001200 Sobic010G001200 Sobic002G279900--Sobic010G001200 Sobic004G099200 Sobic004G099200 Sobic002G279900--Sobic004G099200 Sobic001G525600 Sobic001G525600 Sobic002G279900--Sobic001G525600 Sobic003G313200 Sobic003G313200 Sobic002G279900--Sobic003G313200 Sobic002G279900--Sobic006G022700 Sobic005G214700--Sobic009G090400 Sobic002G157900 Sobic002G157900 Sobic005G214700--Sobic002G157900 Sobic005G214700--Sobic008G102850 Sobic005G214700--Sobic010G190500 Sobic005G214700--Sobic005G122100 Sobic005G214700--Sobic007G222200 Sobic005G214700--Sobic009G098400 Sobic005G214700--Sobic003G009600 Sobic001G024300 Sobic001G024300 Sobic005G214700--Sobic001G024300 Sobic003G114800 Sobic003G114800 Sobic006G173400--Sobic003G114800 Sobic004G091000 Sobic004G091000 Sobic006G173400--Sobic004G091000 Sobic005G000200 Sobic005G000200 Sobic006G173400--Sobic005G000200 Sobic006G173400--Sobic002G128700 Sobic006G173400--Sobic008G102850 Sobic008G079200 Sobic008G079200 Sobic006G173400--Sobic008G079200 Sobic003G147700 Sobic003G147700 Sobic006G173400--Sobic003G147700 Sobic006G173400--Sobic007G103000 Sobic006G173400--Sobic005G065300
Octagon: transcription factors


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