Gene annotation
Transcriptome id Sobic.010G257800.1
Synonym Sb10g029460, ROC7
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5Z9C4
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF280
NCBI CDD KOG0880; Peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT2G29960 : cyclophilin 5
RAP-DB (Rice) LOC_Os06g49470.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G271600 exo70 exocyst complex subunit family protein, putative, expressed -
2 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
3 Sobic.002G128700 expressed protein -
4 Sobic.004G187400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
5 Sobic.009G098400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
6 Sobic.008G102850 - -
7 Sobic.010G190500 - -
8 Sobic.009G253700 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
9 Sobic.005G214700 - -
10 Sobic.005G065300 methyltransferase, putative, expressed -
11 Sobic.001G539820 - -
12 Sobic.005G000200 lipase, putative, expressed -
13 Sobic.005G009700 expressed protein -
14 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase
15 Sobic.001G539880 - -
16 Sobic.002G304300 integral membrane protein DUF6 domain containing protein, expressed -
17 Sobic.007G103000 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
18 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -
20 Sobic.008G079200 OsCML28 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic010G257800 Sobic010G257800 Sobic010G271600 Sobic010G271600 Sobic010G257800--Sobic010G271600 Sobic006G173400 Sobic006G173400 Sobic010G257800--Sobic006G173400 Sobic002G128700 Sobic002G128700 Sobic010G257800--Sobic002G128700 Sobic004G187400 Sobic004G187400 Sobic010G257800--Sobic004G187400 Sobic009G098400 Sobic009G098400 Sobic010G257800--Sobic009G098400 Sobic008G102850 Sobic008G102850 Sobic010G257800--Sobic008G102850 Sobic010G190500 Sobic010G190500 Sobic010G257800--Sobic010G190500 Sobic009G253700 Sobic009G253700 Sobic010G257800--Sobic009G253700 Sobic005G214700 Sobic005G214700 Sobic010G257800--Sobic005G214700 Sobic010G271600--Sobic009G098400 Sobic010G271600--Sobic004G187400 Sobic010G271600--Sobic005G214700 Sobic010G271600--Sobic010G190500 Sobic010G271600--Sobic008G102850 Sobic010G271600--Sobic006G173400 Sobic005G065300 Sobic005G065300 Sobic010G271600--Sobic005G065300 Sobic007G103000 Sobic007G103000 Sobic010G271600--Sobic007G103000 Sobic002G304300 Sobic002G304300 Sobic010G271600--Sobic002G304300 Sobic003G114800 Sobic003G114800 Sobic006G173400--Sobic003G114800 Sobic004G091000 Sobic004G091000 Sobic006G173400--Sobic004G091000 Sobic005G000200 Sobic005G000200 Sobic006G173400--Sobic005G000200 Sobic006G173400--Sobic002G128700 Sobic006G173400--Sobic008G102850 Sobic008G079200 Sobic008G079200 Sobic006G173400--Sobic008G079200 Sobic003G147700 Sobic003G147700 Sobic006G173400--Sobic003G147700 Sobic006G173400--Sobic007G103000 Sobic006G173400--Sobic005G065300 Sobic001G539820 Sobic001G539820 Sobic002G128700--Sobic001G539820 Sobic005G009700 Sobic005G009700 Sobic002G128700--Sobic005G009700 Sobic002G128700--Sobic005G000200 Sobic002G225800 Sobic002G225800 Sobic002G128700--Sobic002G225800 Sobic002G128700--Sobic006G173400 Sobic007G148233 Sobic007G148233 Sobic002G128700--Sobic007G148233 Sobic001G139400 Sobic001G139400 Sobic002G128700--Sobic001G139400 Sobic001G364700 Sobic001G364700 Sobic002G128700--Sobic001G364700 Sobic001G539880 Sobic001G539880 Sobic002G128700--Sobic001G539880 Sobic004G187400--Sobic009G098400 Sobic004G187400--Sobic010G271600 Sobic004G187400--Sobic005G214700 Sobic006G022700 Sobic006G022700 Sobic004G187400--Sobic006G022700 Sobic004G187400--Sobic010G190500 Sobic004G187400--Sobic008G102850 Sobic004G187400--Sobic002G304300 Sobic003G405800 Sobic003G405800 Sobic004G187400--Sobic003G405800 Sobic004G187400--Sobic006G173400 Sobic009G098400--Sobic004G187400 Sobic009G098400--Sobic010G271600 Sobic009G098400--Sobic005G214700 Sobic009G098400--Sobic010G190500 Sobic009G098400--Sobic006G022700 Sobic009G098400--Sobic008G102850 Sobic009G098400--Sobic002G304300 Sobic003G009600 Sobic003G009600 Sobic009G098400--Sobic003G009600 Sobic006G215500 Sobic006G215500 Sobic009G098400--Sobic006G215500 Sobic008G102850--Sobic007G103000 Sobic007G134260 Sobic007G134260 Sobic008G102850--Sobic007G134260 Sobic008G102850--Sobic005G214700 Sobic005G122100 Sobic005G122100 Sobic008G102850--Sobic005G122100 Sobic008G102850--Sobic005G065300 Sobic008G102850--Sobic003G147700 Sobic008G102850--Sobic004G091000 Sobic008G102850--Sobic003G114800 Sobic003G232100 Sobic003G232100 Sobic008G102850--Sobic003G232100 Sobic010G190500--Sobic005G214700 Sobic007G222200 Sobic007G222200 Sobic010G190500--Sobic007G222200 Sobic010G190500--Sobic005G122100 Sobic009G090400 Sobic009G090400 Sobic010G190500--Sobic009G090400 Sobic010G190500--Sobic003G009600 Sobic010G190500--Sobic007G103000 Sobic010G190500--Sobic010G271600 Sobic002G417401 Sobic002G417401 Sobic010G190500--Sobic002G417401 Sobic010G190500--Sobic008G102850 Sobic006G234400 Sobic006G234400 Sobic009G253700--Sobic006G234400 Sobic001G400400 Sobic001G400400 Sobic009G253700--Sobic001G400400 Sobic002G395100 Sobic002G395100 Sobic009G253700--Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic009G253700--Sobic006G219700 Sobic003G197500 Sobic003G197500 Sobic009G253700--Sobic003G197500 Sobic010G034200 Sobic010G034200 Sobic009G253700--Sobic010G034200 Sobic008G043400 Sobic008G043400 Sobic009G253700--Sobic008G043400 Sobic009G253700--Sobic006G173400 Sobic009G259600 Sobic009G259600 Sobic009G253700--Sobic009G259600 Sobic005G214700--Sobic009G090400 Sobic002G157900 Sobic002G157900 Sobic005G214700--Sobic002G157900 Sobic005G214700--Sobic008G102850 Sobic005G214700--Sobic010G190500 Sobic005G214700--Sobic005G122100 Sobic005G214700--Sobic007G222200 Sobic005G214700--Sobic009G098400 Sobic005G214700--Sobic003G009600 Sobic001G024300 Sobic001G024300 Sobic005G214700--Sobic001G024300
Octagon: transcription factors


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