Gene annotation
Transcriptome id Sobic.004G171300.1
Synonym Sb04g022245, SbERF45, ethylene response factor 45, HRE1
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A194YQ52
Pfam PF00847
Panther DB PTHR31190
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G72360 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32620.1 : ethylene-responsive transcription factor ERF114, putative, expressed
MaizeGDB (Corn) Zm00025a026695 , Zm00025a020464 , Zm00025a049133 , Zm00025a036079
Brachypodium PNT61078 , KQK10781
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G134401 - -
2 Sobic.002G145600 expressed protein -
3 Sobic.001G377400 expressed protein -
4 Sobic.009G134700 - -
5 Sobic.009G134450 - -
6 Sobic.004G248000 expressed protein -
7 Sobic.007G177901 - -
8 Sobic.010G222300 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.010G207175 - -
10 Sobic.001G163500 - -
11 Sobic.002G062400 - -
12 Sobic.010G241400 expressed protein -
13 Sobic.006G009200 expressed protein -
14 Sobic.010G252800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G339000 terpene synthase, N-terminal domain containing protein, expressed -
16 Sobic.003G282400 OsMADS32 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.003G129700 - -
18 Sobic.003G380100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@pentatricopeptide, putative, expressed -
19 Sobic.007G179100 - -
20 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5


Gene co-expression network
sample Sobic004G171300 Sobic004G171300 Sobic008G134401 Sobic008G134401 Sobic004G171300--Sobic008G134401 Sobic002G145600 Sobic002G145600 Sobic004G171300--Sobic002G145600 Sobic001G377400 Sobic001G377400 Sobic004G171300--Sobic001G377400 Sobic009G134700 Sobic009G134700 Sobic004G171300--Sobic009G134700 Sobic009G134450 Sobic009G134450 Sobic004G171300--Sobic009G134450 Sobic004G248000 Sobic004G248000 Sobic004G171300--Sobic004G248000 Sobic007G177901 Sobic007G177901 Sobic004G171300--Sobic007G177901 Sobic010G222300 Sobic010G222300 Sobic004G171300--Sobic010G222300 Sobic010G207175 Sobic010G207175 Sobic004G171300--Sobic010G207175 Sobic001G334800 Sobic001G334800 Sobic008G134401--Sobic001G334800 Sobic008G134401--Sobic004G171300 Sobic001G042100 Sobic001G042100 Sobic008G134401--Sobic001G042100 Sobic005G165300 Sobic005G165300 Sobic008G134401--Sobic005G165300 Sobic005G216833 Sobic005G216833 Sobic008G134401--Sobic005G216833 Sobic008G134401--Sobic009G134700 Sobic002G018800 Sobic002G018800 Sobic008G134401--Sobic002G018800 Sobic006G159500 Sobic006G159500 Sobic008G134401--Sobic006G159500 Sobic008G134401--Sobic001G377400 Sobic004G313750 Sobic004G313750 Sobic002G145600--Sobic004G313750 Sobic010G132100 Sobic010G132100 Sobic002G145600--Sobic010G132100 Sobic010G124133 Sobic010G124133 Sobic002G145600--Sobic010G124133 Sobic002G145600--Sobic001G377400 Sobic004G259800 Sobic004G259800 Sobic002G145600--Sobic004G259800 Sobic003G034350 Sobic003G034350 Sobic002G145600--Sobic003G034350 Sobic002G145600--Sobic004G248000 Sobic010G252800 Sobic010G252800 Sobic002G145600--Sobic010G252800 Sobic002G145600--Sobic007G177901 Sobic001G377400--Sobic004G248000 Sobic002G319900 Sobic002G319900 Sobic001G377400--Sobic002G319900 Sobic003G267150 Sobic003G267150 Sobic001G377400--Sobic003G267150 Sobic004G313000 Sobic004G313000 Sobic001G377400--Sobic004G313000 Sobic002G160500 Sobic002G160500 Sobic001G377400--Sobic002G160500 Sobic005G041150 Sobic005G041150 Sobic009G134700--Sobic005G041150 Sobic009G134700--Sobic006G159500 Sobic009G115800 Sobic009G115800 Sobic009G134700--Sobic009G115800 Sobic003G261766 Sobic003G261766 Sobic009G134700--Sobic003G261766 Sobic006G083050 Sobic006G083050 Sobic009G134700--Sobic006G083050 Sobic009G134700--Sobic005G216833 Sobic007G179100 Sobic007G179100 Sobic009G134700--Sobic007G179100 Sobic009G134700--Sobic002G319900 Sobic009G134700--Sobic004G313000 Sobic007G223900 Sobic007G223900 Sobic009G134450--Sobic007G223900 Sobic009G134450--Sobic004G171300 Sobic010G256500 Sobic010G256500 Sobic009G134450--Sobic010G256500 Sobic003G347200 Sobic003G347200 Sobic009G134450--Sobic003G347200 Sobic007G227500 Sobic007G227500 Sobic009G134450--Sobic007G227500 Sobic003G353800 Sobic003G353800 Sobic009G134450--Sobic003G353800 Sobic009G244000 Sobic009G244000 Sobic009G134450--Sobic009G244000 Sobic003G136500 Sobic003G136500 Sobic009G134450--Sobic003G136500 Sobic005G122500 Sobic005G122500 Sobic009G134450--Sobic005G122500 Sobic004G248000--Sobic002G160500 Sobic004G248000--Sobic004G313000 Sobic004G248000--Sobic003G267150 Sobic004G262550 Sobic004G262550 Sobic004G248000--Sobic004G262550 Sobic004G248000--Sobic002G319900 Sobic007G177901--Sobic008G134401 Sobic007G177901--Sobic004G248000 Sobic007G177901--Sobic002G145600 Sobic007G177901--Sobic004G259800 Sobic007G177901--Sobic004G313750 Sobic007G177901--Sobic006G159500 Sobic001G237250 Sobic001G237250 Sobic007G177901--Sobic001G237250 Sobic005G044101 Sobic005G044101 Sobic007G177901--Sobic005G044101 Sobic007G177901--Sobic009G134700 Sobic010G222300--Sobic001G377400 Sobic010G222300--Sobic010G207175 Sobic010G222300--Sobic002G319900 Sobic001G152150 Sobic001G152150 Sobic010G222300--Sobic001G152150 Sobic009G217450 Sobic009G217450 Sobic010G222300--Sobic009G217450 Sobic007G014500 Sobic007G014500 Sobic010G222300--Sobic007G014500 Sobic010G222300--Sobic004G248000 Sobic010G222300--Sobic009G134700 Sobic006G210266 Sobic006G210266 Sobic010G222300--Sobic006G210266 Sobic010G207175--Sobic007G179100 Sobic006G243300 Sobic006G243300 Sobic010G207175--Sobic006G243300 Sobic001G163500 Sobic001G163500 Sobic010G207175--Sobic001G163500 Sobic010G166850 Sobic010G166850 Sobic010G207175--Sobic010G166850 Sobic010G207175--Sobic006G210266 Sobic010G156300 Sobic010G156300 Sobic010G207175--Sobic010G156300 Sobic009G258800 Sobic009G258800 Sobic010G207175--Sobic009G258800 Sobic009G158150 Sobic009G158150 Sobic010G207175--Sobic009G158150 Sobic008G041500 Sobic008G041500 Sobic010G207175--Sobic008G041500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.