Gene annotation
Transcriptome id Sobic.004G179000.1
Synonym CHS, Sb04g022860, ATCHS, TT4
Functional annotation chalcone synthase, putative, expressed
UniProt A0A1Z5RN12
Pfam PF00195
Panther DB PTHR11877 PTHR11877:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os07g31770.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) Zm00025a024178 , Zm00025a033583 , Zm00025a033584 , Zm00025a024185 , Zm00025a048134
Brachypodium KQJ89844 , KQK13828 , KQK19828
Barley HORVU5Hr1G093950.3 , HORVU2Hr1G005220.3 , HORVU2Hr1G005220.2 , HORVU2Hr1G005220.5 , HORVU2Hr1G005220.4 , HORVU7Hr1G020920.4 , HORVU7Hr1G020920.5 , HORVU7Hr1G020920.6 , HORVU7Hr1G020920.7 , HORVU7Hr1G020920.1 , HORVU7Hr1G020920.2 , HORVU7Hr1G020920.3 , HORVU4Hr1G003250.2 , HORVU4Hr1G003250.1 , HORVU7Hr1G024480.2 , HORVU7Hr1G024480.1 , HORVU7Hr1G009190.1 , HORVU6Hr1G003020.3 , HORVU6Hr1G003020.2 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.2 , HORVU5Hr1G093950.4 , HORVU5Hr1G093950.1 , HORVU5Hr1G093950.2 , HORVU2Hr1G116390.1 , HORVU2Hr1G116390.2 , HORVU2Hr1G116390.3 , HORVU2Hr1G116390.4
Wheat TraesCS2B02G048400 , TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS7D02G089300 , TraesCS2B02G558400 , TraesCS2B02G558400 , TraesCS4D02G351300 , TraesCS5B02G487700 , TraesCS2A02G025600 , TraesCS2A02G035300 , TraesCS4A02G437900 , TraesCS4B02G357100 , TraesCS6D02G018500 , TraesCS2D02G030600 , TraesCS5A02G526900 , TraesCS7A02G093900 , TraesCS1D02G359600 , TraesCS6B02G327900 , TraesCS6B02G022300 , TraesCS6A02G015500 , TraesCS6B02G022500 , TraesCS4A02G292500 , TraesCS6A02G015300 , TraesCS5B02G383300 , TraesCS2A02G527700 , TraesCS2B02G041300 , TraesCS2A02G527700 , TraesCS2D02G530600 , TraesCS5A02G379500 , TraesCS5A02G379400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G501500 DUF584 domain containing protein, putative, expressed -
2 Sobic.005G077532 - -
3 Sobic.010G009532 - -
4 Sobic.004G230500 - -
5 Sobic.006G165900 cyclin, putative, expressed -
6 Sobic.001G176800 - -
7 Sobic.008G152100 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.010G097800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G157200 - -
10 Sobic.002G114600 - -
11 Sobic.007G045800 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.009G151500 cinnamoyl-CoA reductase-related, putative, expressed -
13 Sobic.001G180500 expressed protein -
14 Sobic.009G038800 SLD5 - Putative GINS complex subunit, expressed K10735: GINS4, GINS complex subunit 4
15 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
16 Sobic.010G132300 CDK5RAP3, putative, expressed -
17 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -
18 Sobic.001G212701 - -
19 Sobic.004G007850 - -
20 Sobic.001G344450 - K02998: RP-SAe, small subunit ribosomal protein SAe


Gene co-expression network
sample Sobic004G179000 Sobic004G179000 Sobic001G501500 Sobic001G501500 Sobic004G179000--Sobic001G501500 Sobic005G077532 Sobic005G077532 Sobic004G179000--Sobic005G077532 Sobic010G009532 Sobic010G009532 Sobic004G179000--Sobic010G009532 Sobic004G230500 Sobic004G230500 Sobic004G179000--Sobic004G230500 Sobic006G165900 Sobic006G165900 Sobic004G179000--Sobic006G165900 Sobic001G176800 Sobic001G176800 Sobic004G179000--Sobic001G176800 Sobic008G152100 Sobic008G152100 Sobic004G179000--Sobic008G152100 Sobic010G097800 Sobic010G097800 Sobic004G179000--Sobic010G097800 Sobic007G157200 Sobic007G157200 Sobic004G179000--Sobic007G157200 Sobic001G501500--Sobic004G230500 Sobic001G501500--Sobic005G077532 Sobic001G501500--Sobic006G165900 Sobic001G501500--Sobic010G009532 Sobic001G163000 Sobic001G163000 Sobic001G501500--Sobic001G163000 Sobic001G501500--Sobic008G152100 Sobic001G344450 Sobic001G344450 Sobic001G501500--Sobic001G344450 Sobic009G039300 Sobic009G039300 Sobic001G501500--Sobic009G039300 Sobic001G501500--Sobic004G179000 Sobic005G077532--Sobic008G152100 Sobic005G077532--Sobic001G501500 Sobic005G077532--Sobic004G230500 Sobic006G181150 Sobic006G181150 Sobic005G077532--Sobic006G181150 Sobic005G077532--Sobic010G009532 Sobic001G180500 Sobic001G180500 Sobic005G077532--Sobic001G180500 Sobic001G541166 Sobic001G541166 Sobic005G077532--Sobic001G541166 Sobic007G045800 Sobic007G045800 Sobic005G077532--Sobic007G045800 Sobic003G385800 Sobic003G385800 Sobic005G077532--Sobic003G385800 Sobic010G009532--Sobic008G152100 Sobic004G047001 Sobic004G047001 Sobic010G009532--Sobic004G047001 Sobic001G214400 Sobic001G214400 Sobic010G009532--Sobic001G214400 Sobic010G009532--Sobic001G501500 Sobic007G090406 Sobic007G090406 Sobic010G009532--Sobic007G090406 Sobic010G009532--Sobic010G097800 Sobic010G009532--Sobic005G077532 Sobic008G192800 Sobic008G192800 Sobic010G009532--Sobic008G192800 Sobic010G009532--Sobic001G176800 Sobic004G230500--Sobic001G501500 Sobic004G230500--Sobic005G077532 Sobic004G230500--Sobic008G152100 Sobic004G230500--Sobic001G180500 Sobic004G230500--Sobic010G009532 Sobic004G230500--Sobic006G165900 Sobic004G230500--Sobic003G385800 Sobic001G353700 Sobic001G353700 Sobic004G230500--Sobic001G353700 Sobic004G230500--Sobic004G179000 Sobic006G165900--Sobic001G163000 Sobic006G165900--Sobic001G501500 Sobic006G165900--Sobic001G353700 Sobic005G169900 Sobic005G169900 Sobic006G165900--Sobic005G169900 Sobic006G165900--Sobic004G230500 Sobic008G152400 Sobic008G152400 Sobic006G165900--Sobic008G152400 Sobic009G046500 Sobic009G046500 Sobic006G165900--Sobic009G046500 Sobic006G165900--Sobic004G179000 Sobic006G165900--Sobic001G344450 Sobic004G184500 Sobic004G184500 Sobic001G176800--Sobic004G184500 Sobic003G202900 Sobic003G202900 Sobic001G176800--Sobic003G202900 Sobic001G176800--Sobic008G192800 Sobic005G094500 Sobic005G094500 Sobic001G176800--Sobic005G094500 Sobic007G017300 Sobic007G017300 Sobic001G176800--Sobic007G017300 Sobic009G045100 Sobic009G045100 Sobic001G176800--Sobic009G045100 Sobic001G176800--Sobic007G090406 Sobic001G468200 Sobic001G468200 Sobic001G176800--Sobic001G468200 Sobic005G001600 Sobic005G001600 Sobic001G176800--Sobic005G001600 Sobic008G152100--Sobic005G077532 Sobic008G152100--Sobic003G385800 Sobic008G152100--Sobic001G541166 Sobic008G152100--Sobic010G009532 Sobic008G152100--Sobic006G181150 Sobic005G091400 Sobic005G091400 Sobic008G152100--Sobic005G091400 Sobic008G152100--Sobic004G230500 Sobic008G152100--Sobic007G045800 Sobic002G165401 Sobic002G165401 Sobic008G152100--Sobic002G165401 Sobic010G097800--Sobic007G157200 Sobic001G212701 Sobic001G212701 Sobic010G097800--Sobic001G212701 Sobic001G027400 Sobic001G027400 Sobic010G097800--Sobic001G027400 Sobic003G279600 Sobic003G279600 Sobic010G097800--Sobic003G279600 Sobic002G161200 Sobic002G161200 Sobic010G097800--Sobic002G161200 Sobic002G138200 Sobic002G138200 Sobic010G097800--Sobic002G138200 Sobic010G097800--Sobic010G009532 Sobic010G097800--Sobic007G090406 Sobic010G097800--Sobic001G176800 Sobic007G157200--Sobic010G097800 Sobic007G157200--Sobic001G212701 Sobic007G157200--Sobic003G279600 Sobic007G157200--Sobic004G184500 Sobic002G114600 Sobic002G114600 Sobic007G157200--Sobic002G114600 Sobic010G132300 Sobic010G132300 Sobic007G157200--Sobic010G132300 Sobic007G157200--Sobic001G176800 Sobic009G184500 Sobic009G184500 Sobic007G157200--Sobic009G184500 Sobic002G018133 Sobic002G018133 Sobic007G157200--Sobic002G018133
Octagon: transcription factors


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