Gene annotation
Transcriptome id Sobic.004G194700.1
Synonym Sb04g024200
Functional annotation expressed protein
UniProt C5XWB8
Pfam -
Panther DB PTHR36800
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25570 : -
RAP-DB (Rice) LOC_Os05g08820.1 : expressed protein
MaizeGDB (Corn) Zm00025a043113
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.006G007650 - -
3 Sobic.005G182701 - -
4 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
5 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
8 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
9 Sobic.001G410450 - -
10 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
11 Sobic.002G087500 - -
12 Sobic.006G152500 - -
13 Sobic.005G129000 - -
14 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
15 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.001G044800 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
17 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
18 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
19 Sobic.008G039300 cytochrome P450, putative, expressed -
20 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G194700 Sobic004G194700 Sobic007G076000 Sobic007G076000 Sobic004G194700--Sobic007G076000 Sobic006G007650 Sobic006G007650 Sobic004G194700--Sobic006G007650 Sobic005G182701 Sobic005G182701 Sobic004G194700--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic004G194700--Sobic007G055600 Sobic009G115400 Sobic009G115400 Sobic004G194700--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic004G194700--Sobic009G115300 Sobic002G202700 Sobic002G202700 Sobic004G194700--Sobic002G202700 Sobic001G056400 Sobic001G056400 Sobic004G194700--Sobic001G056400 Sobic001G410450 Sobic001G410450 Sobic004G194700--Sobic001G410450 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic006G005500 Sobic006G005500 Sobic007G076000--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic007G076000--Sobic001G125700 Sobic002G040400 Sobic002G040400 Sobic007G076000--Sobic002G040400 Sobic008G028600 Sobic008G028600 Sobic007G076000--Sobic008G028600 Sobic009G014600 Sobic009G014600 Sobic007G076000--Sobic009G014600 Sobic005G219000 Sobic005G219000 Sobic007G076000--Sobic005G219000 Sobic007G076000--Sobic006G007650 Sobic006G007650--Sobic008G028600 Sobic006G007650--Sobic006G005500 Sobic006G007650--Sobic007G076000 Sobic006G007650--Sobic002G040400 Sobic006G007650--Sobic001G125700 Sobic006G007650--Sobic005G219000 Sobic006G007650--Sobic007G055600 Sobic002G087500 Sobic002G087500 Sobic006G007650--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic006G007650--Sobic002G298400 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic005G182701--Sobic006G005500 Sobic005G182701--Sobic001G125700 Sobic005G182701--Sobic009G014600 Sobic005G182701--Sobic009G115400 Sobic005G182701--Sobic009G115300 Sobic001G012000 Sobic001G012000 Sobic005G182701--Sobic001G012000 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic007G055600--Sobic009G014600 Sobic007G055600--Sobic001G056400 Sobic007G055600--Sobic002G040400 Sobic007G055600--Sobic008G028600 Sobic007G055600--Sobic009G115400 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic006G005400 Sobic006G005400 Sobic009G115400--Sobic006G005400 Sobic001G201800 Sobic001G201800 Sobic009G115400--Sobic001G201800 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic009G115300--Sobic005G182701 Sobic009G115300--Sobic007G055600 Sobic009G115300--Sobic007G076000 Sobic009G115300--Sobic001G012000 Sobic009G115300--Sobic009G115400 Sobic009G115300--Sobic006G007650 Sobic009G115300--Sobic001G056400 Sobic009G115300--Sobic006G005500 Sobic009G115300--Sobic001G125700 Sobic002G108400 Sobic002G108400 Sobic002G202700--Sobic002G108400 Sobic002G202700--Sobic009G115400 Sobic002G202700--Sobic001G201800 Sobic002G202700--Sobic009G115300 Sobic010G225500 Sobic010G225500 Sobic002G202700--Sobic010G225500 Sobic002G202700--Sobic001G012000 Sobic002G202700--Sobic006G005400 Sobic002G202700--Sobic006G007650 Sobic002G202700--Sobic006G005500 Sobic001G056400--Sobic005G182701 Sobic001G056400--Sobic001G012000 Sobic001G056400--Sobic007G055600 SobicK044407 SobicK044407 Sobic001G056400--SobicK044407 Sobic003G378301 Sobic003G378301 Sobic001G056400--Sobic003G378301 Sobic001G056400--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056400--Sobic002G423600 Sobic001G056500 Sobic001G056500 Sobic001G056400--Sobic001G056500 Sobic006G045000 Sobic006G045000 Sobic001G056400--Sobic006G045000 Sobic001G410450--Sobic001G056400 Sobic001G410450--Sobic001G012000 Sobic001G410450--Sobic005G182701 Sobic001G410450--SobicK044407 Sobic001G410450--Sobic002G423600 Sobic001G410450--Sobic007G055600 Sobic004G217700 Sobic004G217700 Sobic001G410450--Sobic004G217700 Sobic001G410450--Sobic006G045000 Sobic001G410450--Sobic007G076000
Octagon: transcription factors


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