Gene annotation
Transcriptome id Sobic.004G219600.1,Sobic.004G219600.2,Sobic.004G219600.3
Synonym Sb04g026450, LSH4
Functional annotation DUF640 domain containing protein, putative, expressed
UniProt C5XXT0
Pfam PF04852
Panther DB PTHR31165 PTHR31165:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07090 : Protein of unknown function (DUF640)
RAP-DB (Rice) LOC_Os02g41460.1 : DUF640 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a021109 , Zm00025a019050 , Zm00025a006596 , Zm00025a022541 , Zm00025a039740 , Zm00025a017626 , Zm00025a037663 , Zm00025a032852 , Zm00025a056514 , Zm00025a043957 , Zm00025a044984 , Zm00025a027009 , Zm00025a037773 , Zm00025a010702
Brachypodium KQK10399 , KQK00399 , KQK17088 , KQK17087 , KQK10400 , KQJ83599 , KQJ93496 , KQK01266 , KQJ97098 , KQK00400 , KQK06795
Barley HORVU3Hr1G088000.1 , HORVU1Hr1G070480.1 , HORVU3Hr1G088000.3 , HORVU3Hr1G088000.2 , HORVU3Hr1G088000.5 , HORVU3Hr1G088000.4 , HORVU3Hr1G088000.7 , HORVU3Hr1G088000.6 , HORVU3Hr1G088000.8 , HORVU1Hr1G070480.2 , HORVU1Hr1G041240.2 , HORVU1Hr1G041240.1 , HORVU1Hr1G041240.6 , HORVU1Hr1G041240.7 , HORVU1Hr1G041240.4 , HORVU1Hr1G041240.5 , HORVU7Hr1G106960.7 , HORVU7Hr1G106960.6 , HORVU7Hr1G106960.5 , HORVU7Hr1G106960.4 , HORVU7Hr1G106960.3 , HORVU7Hr1G106960.2 , HORVU1Hr1G060250.1 , HORVU2Hr1G089190.1 , HORVU2Hr1G089190.3 , HORVU2Hr1G089190.2 , HORVU2Hr1G089190.5 , HORVU2Hr1G089190.4 , HORVU2Hr1G089190.7 , HORVU2Hr1G089190.6 , HORVU2Hr1G089190.9 , HORVU2Hr1G089190.8 , HORVU6Hr1G058340.2 , HORVU6Hr1G058340.3 , HORVU6Hr1G088790.1 , HORVU6Hr1G088790.2 , HORVU6Hr1G088790.3 , HORVU6Hr1G088790.4 , HORVU6Hr1G088790.5 , HORVU6Hr1G088790.6 , HORVU2Hr1G060890.5 , HORVU2Hr1G060890.4 , HORVU2Hr1G060890.7 , HORVU2Hr1G060890.6 , HORVU2Hr1G060890.3 , HORVU2Hr1G060890.2 , HORVU2Hr1G060890.8
Wheat TraesCS1B02G235800 , TraesCS1A02G154900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G167000 expressed protein -
2 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
3 Sobic.002G188700 armadillo/beta-catenin repeat family protein, putative, expressed -
4 Sobic.003G082000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
6 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
7 Sobic.007G101800 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed -
8 Sobic.009G099000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.004G162200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
10 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
11 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
12 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
13 Sobic.003G012800 AP2 domain containing protein, expressed -
14 Sobic.006G026400 - -
15 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
16 Sobic.001G219400 DUF640 domain containing protein, putative, expressed -
17 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
19 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G219600 Sobic004G219600 Sobic009G167000 Sobic009G167000 Sobic004G219600--Sobic009G167000 Sobic004G300300 Sobic004G300300 Sobic004G219600--Sobic004G300300 Sobic002G188700 Sobic002G188700 Sobic004G219600--Sobic002G188700 Sobic003G082000 Sobic003G082000 Sobic004G219600--Sobic003G082000 Sobic001G075800 Sobic001G075800 Sobic004G219600--Sobic001G075800 Sobic004G268700 Sobic004G268700 Sobic004G219600--Sobic004G268700 Sobic007G101800 Sobic007G101800 Sobic004G219600--Sobic007G101800 Sobic009G099000 Sobic009G099000 Sobic004G219600--Sobic009G099000 Sobic004G162200 Sobic004G162200 Sobic004G219600--Sobic004G162200 Sobic002G021300 Sobic002G021300 Sobic009G167000--Sobic002G021300 Sobic004G244300 Sobic004G244300 Sobic009G167000--Sobic004G244300 Sobic006G194600 Sobic006G194600 Sobic009G167000--Sobic006G194600 Sobic004G244100 Sobic004G244100 Sobic009G167000--Sobic004G244100 Sobic004G281200 Sobic004G281200 Sobic009G167000--Sobic004G281200 Sobic002G217100 Sobic002G217100 Sobic009G167000--Sobic002G217100 Sobic009G076500 Sobic009G076500 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic008G059000 Sobic008G059000 Sobic009G167000--Sobic008G059000 Sobic004G300300--Sobic002G021300 Sobic003G424500 Sobic003G424500 Sobic004G300300--Sobic003G424500 Sobic004G300300--Sobic009G167000 Sobic002G135800 Sobic002G135800 Sobic004G300300--Sobic002G135800 Sobic004G300300--Sobic002G188700 Sobic004G300300--Sobic007G101800 Sobic003G087100 Sobic003G087100 Sobic004G300300--Sobic003G087100 Sobic004G300300--Sobic008G059000 Sobic004G300300--Sobic009G076500 Sobic002G188700--Sobic004G268700 Sobic002G188700--Sobic009G167000 Sobic002G188700--Sobic002G021300 Sobic002G188700--Sobic004G300300 Sobic002G188700--Sobic003G082000 Sobic002G188700--Sobic008G058900 Sobic002G188700--Sobic009G076500 Sobic006G208100 Sobic006G208100 Sobic002G188700--Sobic006G208100 Sobic010G201200 Sobic010G201200 Sobic002G188700--Sobic010G201200 Sobic010G200700 Sobic010G200700 Sobic003G082000--Sobic010G200700 Sobic003G082000--Sobic009G167000 Sobic003G082000--Sobic002G188700 Sobic004G297200 Sobic004G297200 Sobic003G082000--Sobic004G297200 Sobic002G219200 Sobic002G219200 Sobic003G082000--Sobic002G219200 Sobic009G057400 Sobic009G057400 Sobic003G082000--Sobic009G057400 Sobic004G042600 Sobic004G042600 Sobic003G082000--Sobic004G042600 Sobic003G363200 Sobic003G363200 Sobic003G082000--Sobic003G363200 Sobic003G082000--Sobic004G300300 Sobic002G037400 Sobic002G037400 Sobic001G075800--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic001G075800--Sobic006G203000 Sobic001G075800--Sobic004G244100 Sobic001G075101 Sobic001G075101 Sobic001G075800--Sobic001G075101 Sobic001G075800--Sobic009G167000 Sobic001G075800--Sobic004G244300 Sobic001G050800 Sobic001G050800 Sobic001G075800--Sobic001G050800 Sobic006G026400 Sobic006G026400 Sobic001G075800--Sobic006G026400 Sobic001G075800--Sobic004G281200 Sobic004G268700--Sobic002G188700 Sobic004G268700--Sobic009G167000 Sobic001G482700 Sobic001G482700 Sobic004G268700--Sobic001G482700 Sobic004G268700--Sobic002G021300 Sobic008G036000 Sobic008G036000 Sobic004G268700--Sobic008G036000 Sobic004G268700--Sobic004G300300 Sobic009G030600 Sobic009G030600 Sobic004G268700--Sobic009G030600 Sobic004G268700--Sobic003G424500 Sobic004G268700--Sobic010G200700 Sobic009G170100 Sobic009G170100 Sobic007G101800--Sobic009G170100 Sobic007G101800--Sobic004G300300 Sobic010G265600 Sobic010G265600 Sobic007G101800--Sobic010G265600 Sobic010G105800 Sobic010G105800 Sobic007G101800--Sobic010G105800 Sobic001G473900 Sobic001G473900 Sobic007G101800--Sobic001G473900 Sobic009G071800 Sobic009G071800 Sobic007G101800--Sobic009G071800 Sobic006G032200 Sobic006G032200 Sobic007G101800--Sobic006G032200 Sobic002G203000 Sobic002G203000 Sobic007G101800--Sobic002G203000 Sobic004G084100 Sobic004G084100 Sobic007G101800--Sobic004G084100 Sobic003G278700 Sobic003G278700 Sobic009G099000--Sobic003G278700 Sobic001G157400 Sobic001G157400 Sobic009G099000--Sobic001G157400 Sobic009G099000--Sobic006G026400 Sobic009G099000--Sobic001G050800 Sobic001G460300 Sobic001G460300 Sobic009G099000--Sobic001G460300 Sobic008G040900 Sobic008G040900 Sobic009G099000--Sobic008G040900 Sobic009G099000--Sobic006G194600 Sobic005G231700 Sobic005G231700 Sobic009G099000--Sobic005G231700 Sobic004G172100 Sobic004G172100 Sobic009G099000--Sobic004G172100 Sobic004G162200--Sobic001G075800 Sobic006G263100 Sobic006G263100 Sobic004G162200--Sobic006G263100 Sobic009G169400 Sobic009G169400 Sobic004G162200--Sobic009G169400 Sobic004G162200--Sobic004G300300 Sobic004G162200--Sobic009G167000 Sobic004G162200--Sobic009G030600 Sobic004G162200--Sobic004G268700 Sobic004G162200--Sobic001G050800 Sobic004G162200--Sobic002G188700
Octagon: transcription factors


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