Gene annotation
Transcriptome id Sobic.004G306800.1,Sobic.004G306800.2
Synonym Sb04g033950
Functional annotation armadillo/beta-catenin repeat family protein, putative, expressed
UniProt A0A194YSI9 , A0A194YSE0
Pfam -
Panther DB PTHR22895
NCBI CDD KOG4199; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33945 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os02g52370.1 : armadillo/beta-catenin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022201
Brachypodium KQK01782
Barley HORVU6Hr1G077280.1 , HORVU6Hr1G077280.2 , HORVU6Hr1G077280.3 , HORVU6Hr1G077280.4 , HORVU6Hr1G077280.5 , HORVU6Hr1G077280.6
Wheat TraesCS6B02G343700 , TraesCS6D02G293000 , TraesCS6D02G293000 , TraesCS6A02G313600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G005000 receptor protein kinase, putative, expressed -
2 Sobic.009G076800 GIL1, putative, expressed -
3 Sobic.004G312700 expressed protein -
4 Sobic.010G194500 expansin precursor, putative, expressed -
5 Sobic.006G123000 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
8 Sobic.004G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
9 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
11 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
12 Sobic.006G257100 dirigent-like protein pDIR17, putative, expressed -
13 Sobic.003G226100 expressed protein -
14 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
15 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
16 Sobic.010G014300 expressed protein -
17 Sobic.004G153700 expressed protein -
18 Sobic.002G005200 dirigent, putative, expressed -
19 Sobic.009G187000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -


Gene co-expression network
sample Sobic004G306800 Sobic004G306800 Sobic001G005000 Sobic001G005000 Sobic004G306800--Sobic001G005000 Sobic009G076800 Sobic009G076800 Sobic004G306800--Sobic009G076800 Sobic004G312700 Sobic004G312700 Sobic004G306800--Sobic004G312700 Sobic010G194500 Sobic010G194500 Sobic004G306800--Sobic010G194500 Sobic006G123000 Sobic006G123000 Sobic004G306800--Sobic006G123000 Sobic004G249700 Sobic004G249700 Sobic004G306800--Sobic004G249700 Sobic007G133600 Sobic007G133600 Sobic004G306800--Sobic007G133600 Sobic004G246300 Sobic004G246300 Sobic004G306800--Sobic004G246300 Sobic006G166700 Sobic006G166700 Sobic004G306800--Sobic006G166700 Sobic001G005000--Sobic010G194500 Sobic001G005000--Sobic009G076800 Sobic001G005000--Sobic006G166700 Sobic001G239400 Sobic001G239400 Sobic001G005000--Sobic001G239400 Sobic006G018900 Sobic006G018900 Sobic001G005000--Sobic006G018900 Sobic001G005000--Sobic004G249700 Sobic010G014300 Sobic010G014300 Sobic001G005000--Sobic010G014300 Sobic001G005000--Sobic007G133600 Sobic001G462100 Sobic001G462100 Sobic001G005000--Sobic001G462100 Sobic009G076800--Sobic001G005000 Sobic009G076800--Sobic010G194500 Sobic002G005200 Sobic002G005200 Sobic009G076800--Sobic002G005200 Sobic009G076800--Sobic006G018900 Sobic006G257100 Sobic006G257100 Sobic009G076800--Sobic006G257100 Sobic009G076800--Sobic006G166700 Sobic009G076800--Sobic004G249700 Sobic009G076800--Sobic001G239400 Sobic009G076800--Sobic010G014300 Sobic004G198200 Sobic004G198200 Sobic004G312700--Sobic004G198200 Sobic004G300600 Sobic004G300600 Sobic004G312700--Sobic004G300600 Sobic004G168800 Sobic004G168800 Sobic004G312700--Sobic004G168800 Sobic009G081400 Sobic009G081400 Sobic004G312700--Sobic009G081400 Sobic007G130000 Sobic007G130000 Sobic004G312700--Sobic007G130000 Sobic001G427400 Sobic001G427400 Sobic004G312700--Sobic001G427400 Sobic001G070200 Sobic001G070200 Sobic004G312700--Sobic001G070200 Sobic009G190400 Sobic009G190400 Sobic004G312700--Sobic009G190400 Sobic003G414400 Sobic003G414400 Sobic004G312700--Sobic003G414400 Sobic010G194500--Sobic001G005000 Sobic004G153700 Sobic004G153700 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic003G226100 Sobic003G226100 Sobic010G194500--Sobic003G226100 Sobic009G204800 Sobic009G204800 Sobic010G194500--Sobic009G204800 Sobic010G194500--Sobic009G076800 Sobic010G008000 Sobic010G008000 Sobic010G194500--Sobic010G008000 Sobic007G206700 Sobic007G206700 Sobic010G194500--Sobic007G206700 Sobic010G194500--Sobic004G249700 Sobic009G187000 Sobic009G187000 Sobic006G123000--Sobic009G187000 Sobic006G278600 Sobic006G278600 Sobic006G123000--Sobic006G278600 Sobic006G123000--Sobic007G206700 Sobic005G098200 Sobic005G098200 Sobic006G123000--Sobic005G098200 Sobic002G001300 Sobic002G001300 Sobic006G123000--Sobic002G001300 Sobic001G494150 Sobic001G494150 Sobic006G123000--Sobic001G494150 Sobic003G083700 Sobic003G083700 Sobic006G123000--Sobic003G083700 Sobic007G076800 Sobic007G076800 Sobic006G123000--Sobic007G076800 Sobic008G136900 Sobic008G136900 Sobic006G123000--Sobic008G136900 Sobic004G249700--Sobic001G239400 Sobic004G249700--Sobic001G005000 Sobic004G249700--Sobic010G194500 Sobic009G008300 Sobic009G008300 Sobic004G249700--Sobic009G008300 Sobic004G249700--Sobic007G133600 Sobic004G249700--Sobic009G076800 Sobic004G249700--Sobic006G166700 Sobic004G107900 Sobic004G107900 Sobic004G249700--Sobic004G107900 Sobic004G249700--Sobic006G018900 Sobic007G133600--Sobic009G008300 Sobic002G245900 Sobic002G245900 Sobic007G133600--Sobic002G245900 Sobic007G133600--Sobic001G239400 Sobic007G133600--Sobic001G005000 Sobic007G133600--Sobic004G249700 Sobic007G133600--Sobic006G166700 Sobic004G288400 Sobic004G288400 Sobic007G133600--Sobic004G288400 Sobic003G057600 Sobic003G057600 Sobic007G133600--Sobic003G057600 Sobic010G087200 Sobic010G087200 Sobic007G133600--Sobic010G087200 Sobic002G379700 Sobic002G379700 Sobic004G246300--Sobic002G379700 Sobic002G277700 Sobic002G277700 Sobic004G246300--Sobic002G277700 Sobic004G246300--Sobic009G204800 Sobic004G246300--Sobic007G133600 Sobic004G246300--Sobic010G194500 Sobic004G246300--Sobic001G005000 Sobic007G015400 Sobic007G015400 Sobic004G246300--Sobic007G015400 Sobic002G032900 Sobic002G032900 Sobic004G246300--Sobic002G032900 Sobic004G246300--Sobic001G239400 Sobic006G166700--Sobic010G014300 Sobic006G166700--Sobic001G005000 Sobic006G166700--Sobic010G087200 Sobic006G166700--Sobic002G001300 Sobic006G166700--Sobic004G288400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic006G166700--Sobic010G194500 Sobic006G166700--Sobic009G076800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.