Gene annotation
Transcriptome id Sobic.004G314200.1
Synonym Sb04g034610, LAC14
Functional annotation laccase precursor protein, putative, expressed
UniProt A0A194YSN6
Pfam PF00394 PF07732 PF07731
Panther DB PTHR11709 PTHR11709:SF118
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G09360 : laccase 14
RAP-DB (Rice) LOC_Os02g51440.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a033185
Brachypodium -
Barley HORVU7Hr1G083090.4 , HORVU7Hr1G083090.3 , HORVU7Hr1G083090.2 , HORVU7Hr1G083090.1 , HORVU7Hr1G036100.5 , HORVU7Hr1G036100.4 , HORVU7Hr1G036100.7 , HORVU7Hr1G036100.6 , HORVU7Hr1G036100.1 , HORVU7Hr1G036100.3 , HORVU7Hr1G036100.2
Wheat TraesCS7B02G248800 , TraesCS7D02G176300 , TraesCS7B02G079900 , TraesCS7B02G080100 , TraesCS7B02G080100 , TraesCS7A02G337400 , TraesCS6D02G284200 , TraesCS7D02G176500 , TraesCS7D02G176400 , TraesCS7D02G345000 , TraesCS6A02G304900 , TraesCS7A02G175000 , TraesCS7B02G079800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124300 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
2 Sobic.004G305766 - -
3 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
4 Sobic.010G103600 expressed protein -
5 Sobic.003G364100 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.005G156600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
7 Sobic.010G259233 - -
8 Sobic.005G177500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
10 Sobic.009G196400 expressed protein -
11 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
12 Sobic.007G170000 - -
13 Sobic.001G025101 - -
14 Sobic.005G069700 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.001G331301 - -
16 Sobic.003G079466 - -
17 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
18 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
19 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic004G314200 Sobic004G314200 Sobic010G124300 Sobic010G124300 Sobic004G314200--Sobic010G124300 Sobic004G305766 Sobic004G305766 Sobic004G314200--Sobic004G305766 Sobic006G068300 Sobic006G068300 Sobic004G314200--Sobic006G068300 Sobic010G103600 Sobic010G103600 Sobic004G314200--Sobic010G103600 Sobic003G364100 Sobic003G364100 Sobic004G314200--Sobic003G364100 Sobic005G156600 Sobic005G156600 Sobic004G314200--Sobic005G156600 Sobic010G259233 Sobic010G259233 Sobic004G314200--Sobic010G259233 Sobic005G177500 Sobic005G177500 Sobic004G314200--Sobic005G177500 Sobic002G128300 Sobic002G128300 Sobic004G314200--Sobic002G128300 Sobic001G276550 Sobic001G276550 Sobic010G124300--Sobic001G276550 Sobic003G277850 Sobic003G277850 Sobic010G124300--Sobic003G277850 Sobic004G239200 Sobic004G239200 Sobic010G124300--Sobic004G239200 Sobic003G034200 Sobic003G034200 Sobic010G124300--Sobic003G034200 Sobic010G124300--Sobic005G156600 Sobic010G006000 Sobic010G006000 Sobic010G124300--Sobic010G006000 Sobic010G124300--Sobic004G314200 Sobic003G123800 Sobic003G123800 Sobic010G124300--Sobic003G123800 Sobic009G057000 Sobic009G057000 Sobic010G124300--Sobic009G057000 Sobic003G426750 Sobic003G426750 Sobic004G305766--Sobic003G426750 Sobic001G196950 Sobic001G196950 Sobic004G305766--Sobic001G196950 Sobic001G154800 Sobic001G154800 Sobic004G305766--Sobic001G154800 Sobic008G153801 Sobic008G153801 Sobic004G305766--Sobic008G153801 Sobic009G062150 Sobic009G062150 Sobic004G305766--Sobic009G062150 Sobic006G204850 Sobic006G204850 Sobic004G305766--Sobic006G204850 Sobic002G400050 Sobic002G400050 Sobic004G305766--Sobic002G400050 Sobic003G154600 Sobic003G154600 Sobic004G305766--Sobic003G154600 Sobic004G098650 Sobic004G098650 Sobic004G305766--Sobic004G098650 Sobic001G025101 Sobic001G025101 Sobic006G068300--Sobic001G025101 Sobic010G176101 Sobic010G176101 Sobic006G068300--Sobic010G176101 Sobic009G196400 Sobic009G196400 Sobic006G068300--Sobic009G196400 Sobic001G025300 Sobic001G025300 Sobic006G068300--Sobic001G025300 Sobic002G416600 Sobic002G416600 Sobic006G068300--Sobic002G416600 Sobic004G071650 Sobic004G071650 Sobic006G068300--Sobic004G071650 Sobic001G462700 Sobic001G462700 Sobic006G068300--Sobic001G462700 Sobic006G068300--Sobic005G177500 Sobic003G117600 Sobic003G117600 Sobic006G068300--Sobic003G117600 Sobic010G072200 Sobic010G072200 Sobic010G103600--Sobic010G072200 Sobic007G085600 Sobic007G085600 Sobic010G103600--Sobic007G085600 Sobic001G476500 Sobic001G476500 Sobic010G103600--Sobic001G476500 Sobic002G287100 Sobic002G287100 Sobic010G103600--Sobic002G287100 Sobic009G032800 Sobic009G032800 Sobic010G103600--Sobic009G032800 Sobic005G179200 Sobic005G179200 Sobic010G103600--Sobic005G179200 Sobic008G186100 Sobic008G186100 Sobic010G103600--Sobic008G186100 Sobic006G092500 Sobic006G092500 Sobic010G103600--Sobic006G092500 Sobic001G320400 Sobic001G320400 Sobic010G103600--Sobic001G320400 Sobic003G236450 Sobic003G236450 Sobic003G364100--Sobic003G236450 Sobic003G364100--Sobic002G128300 Sobic006G153100 Sobic006G153100 Sobic003G364100--Sobic006G153100 Sobic003G364100--Sobic005G179200 Sobic007G141500 Sobic007G141500 Sobic003G364100--Sobic007G141500 Sobic010G079600 Sobic010G079600 Sobic003G364100--Sobic010G079600 Sobic001G325000 Sobic001G325000 Sobic003G364100--Sobic001G325000 Sobic007G170000 Sobic007G170000 Sobic003G364100--Sobic007G170000 Sobic001G243600 Sobic001G243600 Sobic003G364100--Sobic001G243600 Sobic002G182400 Sobic002G182400 Sobic005G156600--Sobic002G182400 Sobic010G035700 Sobic010G035700 Sobic005G156600--Sobic010G035700 Sobic002G163100 Sobic002G163100 Sobic005G156600--Sobic002G163100 Sobic005G169100 Sobic005G169100 Sobic005G156600--Sobic005G169100 Sobic002G018500 Sobic002G018500 Sobic005G156600--Sobic002G018500 Sobic001G335600 Sobic001G335600 Sobic005G156600--Sobic001G335600 Sobic010G102300 Sobic010G102300 Sobic005G156600--Sobic010G102300 Sobic004G180301 Sobic004G180301 Sobic005G156600--Sobic004G180301 Sobic004G128400 Sobic004G128400 Sobic005G156600--Sobic004G128400 Sobic002G109800 Sobic002G109800 Sobic010G259233--Sobic002G109800 Sobic010G259233--Sobic004G314200 Sobic007G106050 Sobic007G106050 Sobic010G259233--Sobic007G106050 Sobic009G079925 Sobic009G079925 Sobic010G259233--Sobic009G079925 Sobic005G177500--Sobic006G068300 Sobic005G177500--Sobic009G196400 Sobic005G177500--Sobic010G176101 Sobic005G177500--Sobic001G025101 Sobic005G177500--Sobic001G462700 Sobic001G243400 Sobic001G243400 Sobic005G177500--Sobic001G243400 Sobic006G162100 Sobic006G162100 Sobic005G177500--Sobic006G162100 Sobic005G177500--Sobic001G025300 Sobic004G022900 Sobic004G022900 Sobic005G177500--Sobic004G022900 Sobic002G128300--Sobic006G153100 Sobic002G128300--Sobic005G179200 Sobic001G444400 Sobic001G444400 Sobic002G128300--Sobic001G444400 Sobic002G128300--Sobic001G243600 Sobic009G120000 Sobic009G120000 Sobic002G128300--Sobic009G120000 Sobic004G111800 Sobic004G111800 Sobic002G128300--Sobic004G111800 Sobic002G128300--Sobic003G236450 Sobic001G063000 Sobic001G063000 Sobic002G128300--Sobic001G063000 Sobic002G128300--Sobic007G141500
Octagon: transcription factors


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