Gene annotation
Transcriptome id Sobic.004G346100.1
Synonym Sb04g037310
Functional annotation expressed protein
UniProt A0A194YT58
Pfam PF10294
Panther DB PTHR14614 PTHR14614:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08125 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g57330.1 : expressed protein
MaizeGDB (Corn) Zm00025a022613 , Zm00025a032792
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
2 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
3 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
4 Sobic.003G417900 cullin-1, putative, expressed -
5 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
6 Sobic.004G036300 marker Xucw84, putative, expressed -
7 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
8 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
9 Sobic.004G307500 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
10 Sobic.001G524400 G-patch domain containing protein, expressed K11135: Pin2-interacting protein X1
11 Sobic.007G187600 pentatricopeptide, putative, expressed -
12 Sobic.003G074400 expressed protein -
13 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
14 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
15 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
16 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
17 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
18 Sobic.010G203300 paxneb-related protein, putative, expressed K11375: elongator complex protein 4
19 Sobic.004G041200 expressed protein -
20 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G346100 Sobic004G346100 Sobic001G168900 Sobic001G168900 Sobic004G346100--Sobic001G168900 Sobic009G058500 Sobic009G058500 Sobic004G346100--Sobic009G058500 Sobic009G036200 Sobic009G036200 Sobic004G346100--Sobic009G036200 Sobic003G417900 Sobic003G417900 Sobic004G346100--Sobic003G417900 Sobic002G077900 Sobic002G077900 Sobic004G346100--Sobic002G077900 Sobic004G036300 Sobic004G036300 Sobic004G346100--Sobic004G036300 Sobic009G143800 Sobic009G143800 Sobic004G346100--Sobic009G143800 Sobic009G258400 Sobic009G258400 Sobic004G346100--Sobic009G258400 Sobic004G307500 Sobic004G307500 Sobic004G346100--Sobic004G307500 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic001G168900--Sobic004G307500 Sobic001G168900--Sobic002G077900 Sobic001G291800 Sobic001G291800 Sobic001G168900--Sobic001G291800 Sobic001G168900--Sobic009G258400 Sobic001G042200 Sobic001G042200 Sobic001G168900--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic001G168900--Sobic006G049100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000 Sobic001G360200 Sobic001G360200 Sobic009G058500--Sobic001G360200 Sobic007G184500 Sobic007G184500 Sobic009G058500--Sobic007G184500 Sobic010G018700 Sobic010G018700 Sobic009G058500--Sobic010G018700 Sobic009G058500--Sobic002G077900 Sobic003G439800 Sobic003G439800 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic006G278700 Sobic006G278700 Sobic009G058500--Sobic006G278700 Sobic006G044600 Sobic006G044600 Sobic009G058500--Sobic006G044600 Sobic009G058500--Sobic004G346100 Sobic007G111100 Sobic007G111100 Sobic009G036200--Sobic007G111100 Sobic001G395100 Sobic001G395100 Sobic009G036200--Sobic001G395100 Sobic009G036200--Sobic009G258400 Sobic003G212900 Sobic003G212900 Sobic009G036200--Sobic003G212900 Sobic002G262700 Sobic002G262700 Sobic009G036200--Sobic002G262700 Sobic006G121300 Sobic006G121300 Sobic009G036200--Sobic006G121300 Sobic009G036200--Sobic004G346100 Sobic009G036200--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic009G036200--Sobic004G309900 Sobic002G197100 Sobic002G197100 Sobic003G417900--Sobic002G197100 Sobic001G390500 Sobic001G390500 Sobic003G417900--Sobic001G390500 Sobic001G408700 Sobic001G408700 Sobic003G417900--Sobic001G408700 Sobic003G354100 Sobic003G354100 Sobic003G417900--Sobic003G354100 Sobic004G013600 Sobic004G013600 Sobic003G417900--Sobic004G013600 Sobic001G425000 Sobic001G425000 Sobic003G417900--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic003G417900--Sobic006G092800 Sobic003G189900 Sobic003G189900 Sobic003G417900--Sobic003G189900 Sobic008G073000 Sobic008G073000 Sobic003G417900--Sobic008G073000 Sobic002G077900--Sobic001G168900 Sobic001G226000 Sobic001G226000 Sobic002G077900--Sobic001G226000 Sobic001G370300 Sobic001G370300 Sobic002G077900--Sobic001G370300 Sobic003G420700 Sobic003G420700 Sobic002G077900--Sobic003G420700 Sobic002G077900--Sobic004G307500 Sobic002G077900--Sobic009G058500 Sobic002G077900--Sobic009G258400 Sobic002G077900--Sobic006G044600 Sobic010G193800 Sobic010G193800 Sobic002G077900--Sobic010G193800 Sobic007G041300 Sobic007G041300 Sobic004G036300--Sobic007G041300 Sobic002G159200 Sobic002G159200 Sobic004G036300--Sobic002G159200 Sobic004G036300--Sobic004G346100 Sobic004G036300--Sobic009G036200 Sobic003G442000 Sobic003G442000 Sobic004G036300--Sobic003G442000 Sobic009G137700 Sobic009G137700 Sobic004G036300--Sobic009G137700 Sobic004G088200 Sobic004G088200 Sobic004G036300--Sobic004G088200 Sobic003G114500 Sobic003G114500 Sobic004G036300--Sobic003G114500 Sobic007G046200 Sobic007G046200 Sobic004G036300--Sobic007G046200 Sobic004G353000 Sobic004G353000 Sobic009G143800--Sobic004G353000 Sobic001G259000 Sobic001G259000 Sobic009G143800--Sobic001G259000 Sobic004G332400 Sobic004G332400 Sobic009G143800--Sobic004G332400 Sobic008G014500 Sobic008G014500 Sobic009G143800--Sobic008G014500 Sobic010G118000 Sobic010G118000 Sobic009G143800--Sobic010G118000 Sobic006G200700 Sobic006G200700 Sobic009G143800--Sobic006G200700 Sobic008G147200 Sobic008G147200 Sobic009G143800--Sobic008G147200 Sobic008G131000 Sobic008G131000 Sobic009G143800--Sobic008G131000 Sobic009G143800--Sobic001G291800 Sobic009G258400--Sobic001G168900 Sobic006G120800 Sobic006G120800 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic001G114500 Sobic001G114500 Sobic009G258400--Sobic001G114500 Sobic009G258400--Sobic009G036200 Sobic009G258400--Sobic002G077900 Sobic009G258400--Sobic001G291800 Sobic009G258400--Sobic003G132000 Sobic001G507400 Sobic001G507400 Sobic009G258400--Sobic001G507400 Sobic004G307500--Sobic001G168900 Sobic001G524400 Sobic001G524400 Sobic004G307500--Sobic001G524400 Sobic004G307500--Sobic002G077900 Sobic002G005000 Sobic002G005000 Sobic004G307500--Sobic002G005000 Sobic004G307500--Sobic009G258400 Sobic004G307500--Sobic001G291800 Sobic007G143500 Sobic007G143500 Sobic004G307500--Sobic007G143500 Sobic001G007800 Sobic001G007800 Sobic004G307500--Sobic001G007800 Sobic001G527300 Sobic001G527300 Sobic004G307500--Sobic001G527300
Octagon: transcription factors


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