Gene annotation
Transcriptome id Sobic.005G002000.2,Sobic.005G002000.3,Sobic.005G002000.1
Synonym Sb05g000340
Functional annotation phospholipase C, putative, expressed
UniProt A0A1Z5RG00 , A0A1Z5RH39 , A0A1Z5RGW6
Pfam PF00168 PF00388 PF00387 PF00387 PF00388 PF00168 PF00387 PF00388
Panther DB PTHR10336 PTHR10336:SF92
NCBI CDD -
KEGG Orthology K05857; phosphatidylinositol phospholipase C, delta
Gene Ontology GO:0005515; protein binding GO:0007165signal transduction GO:0006629lipid metabolic process GO:0004435phosphatidylinositol phospholipase C activity GO:0007165signal transduction GO:0006629lipid metabolic process GO:0004435phosphatidylinositol phospholipase C activity


Orthologs (automatic annotation)
TAIR AT2G40116 : Phosphoinositide-specific phospholipase C family protein
RAP-DB (Rice) LOC_Os12g37560.2,LOC_Os12g37560.1 : phospholipase C, putative, expressed
MaizeGDB (Corn) Zm00025a018608 , Zm00025a018603
Brachypodium -
Barley HORVU0Hr1G012510.5 , HORVU0Hr1G012510.4 , HORVU0Hr1G012510.3 , HORVU0Hr1G012510.2 , HORVU0Hr1G012510.1
Wheat TraesCS5A02G155300 , TraesCS5A02G155300 , TraesCS5A02G155300 , TraesCS5D02G160300 , TraesCS5D02G160300 , TraesCS5B02G153600 , TraesCS5B02G153600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
2 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
3 Sobic.004G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
5 Sobic.001G403300 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
6 Sobic.004G207200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
8 Sobic.003G380000 expressed protein -
9 Sobic.003G135700 - -
10 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
12 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
14 Sobic.004G069850 - -
15 Sobic.001G398700 expressed protein -
16 Sobic.002G424800 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
18 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
20 Sobic.001G428200 expressed protein -


Gene co-expression network
sample Sobic005G002000 Sobic005G002000 Sobic004G209900 Sobic004G209900 Sobic005G002000--Sobic004G209900 Sobic005G095900 Sobic005G095900 Sobic005G002000--Sobic005G095900 Sobic004G083100 Sobic004G083100 Sobic005G002000--Sobic004G083100 Sobic005G228000 Sobic005G228000 Sobic005G002000--Sobic005G228000 Sobic001G403300 Sobic001G403300 Sobic005G002000--Sobic001G403300 Sobic004G207200 Sobic004G207200 Sobic005G002000--Sobic004G207200 Sobic002G345300 Sobic002G345300 Sobic005G002000--Sobic002G345300 Sobic003G380000 Sobic003G380000 Sobic005G002000--Sobic003G380000 Sobic003G135700 Sobic003G135700 Sobic005G002000--Sobic003G135700 Sobic008G189300 Sobic008G189300 Sobic004G209900--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic004G209900--Sobic010G135000 Sobic010G037300 Sobic010G037300 Sobic004G209900--Sobic010G037300 Sobic006G180200 Sobic006G180200 Sobic004G209900--Sobic006G180200 Sobic004G209900--Sobic005G228000 Sobic003G130800 Sobic003G130800 Sobic004G209900--Sobic003G130800 Sobic002G212200 Sobic002G212200 Sobic004G209900--Sobic002G212200 Sobic004G209900--Sobic005G095900 Sobic001G220400 Sobic001G220400 Sobic004G209900--Sobic001G220400 Sobic005G095900--Sobic001G220400 Sobic005G095900--Sobic004G209900 Sobic005G095900--Sobic005G228000 Sobic004G069850 Sobic004G069850 Sobic005G095900--Sobic004G069850 Sobic001G343900 Sobic001G343900 Sobic005G095900--Sobic001G343900 Sobic004G308400 Sobic004G308400 Sobic005G095900--Sobic004G308400 Sobic010G121300 Sobic010G121300 Sobic005G095900--Sobic010G121300 Sobic002G122700 Sobic002G122700 Sobic005G095900--Sobic002G122700 Sobic003G077900 Sobic003G077900 Sobic005G095900--Sobic003G077900 Sobic005G076600 Sobic005G076600 Sobic004G083100--Sobic005G076600 Sobic002G407700 Sobic002G407700 Sobic004G083100--Sobic002G407700 Sobic004G083100--Sobic005G002000 Sobic009G232266 Sobic009G232266 Sobic004G083100--Sobic009G232266 Sobic007G131800 Sobic007G131800 Sobic004G083100--Sobic007G131800 Sobic004G179600 Sobic004G179600 Sobic004G083100--Sobic004G179600 Sobic003G277500 Sobic003G277500 Sobic004G083100--Sobic003G277500 Sobic006G157200 Sobic006G157200 Sobic004G083100--Sobic006G157200 Sobic004G035200 Sobic004G035200 Sobic004G083100--Sobic004G035200 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic001G432700 Sobic001G432700 Sobic001G403300--Sobic001G432700 Sobic004G195000 Sobic004G195000 Sobic001G403300--Sobic004G195000 Sobic010G195500 Sobic010G195500 Sobic001G403300--Sobic010G195500 Sobic006G068800 Sobic006G068800 Sobic001G403300--Sobic006G068800 Sobic001G403300--Sobic004G207200 Sobic005G080200 Sobic005G080200 Sobic001G403300--Sobic005G080200 Sobic001G403300--Sobic003G135700 Sobic009G065300 Sobic009G065300 Sobic001G403300--Sobic009G065300 Sobic003G384700 Sobic003G384700 Sobic001G403300--Sobic003G384700 Sobic004G207200--Sobic002G345300 Sobic004G207200--Sobic001G403300 Sobic003G211200 Sobic003G211200 Sobic004G207200--Sobic003G211200 Sobic003G371750 Sobic003G371750 Sobic004G207200--Sobic003G371750 Sobic002G335300 Sobic002G335300 Sobic004G207200--Sobic002G335300 Sobic006G127900 Sobic006G127900 Sobic004G207200--Sobic006G127900 Sobic005G093000 Sobic005G093000 Sobic004G207200--Sobic005G093000 Sobic007G087200 Sobic007G087200 Sobic004G207200--Sobic007G087200 Sobic006G249300 Sobic006G249300 Sobic004G207200--Sobic006G249300 Sobic002G046100 Sobic002G046100 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic010G232100 Sobic010G232100 Sobic003G380000--Sobic010G232100 Sobic003G380000--Sobic005G228000 Sobic003G380000--Sobic002G345300 Sobic003G380000--Sobic010G178200 Sobic003G380000--Sobic003G285800 Sobic003G380000--Sobic010G135000 Sobic009G046600 Sobic009G046600 Sobic003G380000--Sobic009G046600 Sobic003G380000--Sobic004G157000 Sobic003G380000--Sobic002G046100 Sobic010G268400 Sobic010G268400 Sobic003G135700--Sobic010G268400 Sobic003G192100 Sobic003G192100 Sobic003G135700--Sobic003G192100 Sobic007G025500 Sobic007G025500 Sobic003G135700--Sobic007G025500 Sobic010G136000 Sobic010G136000 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic001G107400 Sobic001G107400 Sobic003G135700--Sobic001G107400 Sobic002G373001 Sobic002G373001 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400
Octagon: transcription factors


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