Gene annotation
Transcriptome id Sobic.004G083100.1
Synonym Sb04g006850
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glycosyl hydrolases family 17, putative, expressed
UniProt A0A194YND1
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G15800 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g10660.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a034632 , Zm00025a019568
Brachypodium KQK20290
Barley HORVU5Hr1G083710.9 , HORVU4Hr1G065340.16 , HORVU4Hr1G065340.17 , HORVU4Hr1G065340.14 , HORVU4Hr1G065340.15 , HORVU4Hr1G065340.12 , HORVU4Hr1G065340.13 , HORVU4Hr1G065340.10 , HORVU4Hr1G065340.11 , HORVU6Hr1G032490.4 , HORVU6Hr1G032490.5 , HORVU6Hr1G032490.2 , HORVU6Hr1G032490.3 , HORVU6Hr1G032490.1 , HORVU5Hr1G083710.8 , HORVU5Hr1G083710.2 , HORVU5Hr1G083710.3 , HORVU5Hr1G083710.1 , HORVU5Hr1G083710.6 , HORVU5Hr1G083710.7 , HORVU5Hr1G083710.4 , HORVU5Hr1G083710.5 , HORVU4Hr1G065340.8 , HORVU4Hr1G065340.9 , HORVU4Hr1G065340.4 , HORVU4Hr1G065340.5 , HORVU4Hr1G065340.6 , HORVU4Hr1G065340.7 , HORVU4Hr1G065340.1 , HORVU4Hr1G065340.2 , HORVU4Hr1G065340.3
Wheat TraesCS4A02G077800 , TraesCS6D02G148900 , TraesCS6B02G188000 , TraesCS4D02G235000 , TraesCS5D02G335500 , TraesCS6A02G164100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G076600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
3 Sobic.005G002000 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
4 Sobic.009G232266 - -
5 Sobic.007G131800 Annexin D5(PubMedID : 26320239)@annexin, putative, expressed K17095: annexin A7/11
6 Sobic.004G179600 VP15, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
7 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
8 Sobic.006G157200 expressed protein -
9 Sobic.004G035200 - -
10 Sobic.002G363400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
11 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
12 Sobic.001G530350 - -
13 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
14 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
15 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
16 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
17 Sobic.003G296300 WRKY13, expressed -
18 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
19 Sobic.006G044932 - -
20 Sobic.003G271201 - -


Gene co-expression network
sample Sobic004G083100 Sobic004G083100 Sobic005G076600 Sobic005G076600 Sobic004G083100--Sobic005G076600 Sobic002G407700 Sobic002G407700 Sobic004G083100--Sobic002G407700 Sobic005G002000 Sobic005G002000 Sobic004G083100--Sobic005G002000 Sobic009G232266 Sobic009G232266 Sobic004G083100--Sobic009G232266 Sobic007G131800 Sobic007G131800 Sobic004G083100--Sobic007G131800 Sobic004G179600 Sobic004G179600 Sobic004G083100--Sobic004G179600 Sobic003G277500 Sobic003G277500 Sobic004G083100--Sobic003G277500 Sobic006G157200 Sobic006G157200 Sobic004G083100--Sobic006G157200 Sobic004G035200 Sobic004G035200 Sobic004G083100--Sobic004G035200 Sobic005G076600--Sobic006G157200 Sobic005G076600--Sobic004G179600 Sobic006G250500 Sobic006G250500 Sobic005G076600--Sobic006G250500 Sobic004G247600 Sobic004G247600 Sobic005G076600--Sobic004G247600 Sobic005G075900 Sobic005G075900 Sobic005G076600--Sobic005G075900 Sobic002G245900 Sobic002G245900 Sobic005G076600--Sobic002G245900 Sobic009G105600 Sobic009G105600 Sobic005G076600--Sobic009G105600 Sobic004G157000 Sobic004G157000 Sobic005G076600--Sobic004G157000 Sobic005G076600--Sobic007G131800 Sobic006G044932 Sobic006G044932 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic001G343900 Sobic001G343900 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic004G195000 Sobic004G195000 Sobic002G407700--Sobic004G195000 Sobic002G407700--Sobic009G232266 Sobic003G296300 Sobic003G296300 Sobic002G407700--Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic002G407700--Sobic001G345400 Sobic005G228000 Sobic005G228000 Sobic002G407700--Sobic005G228000 Sobic004G209900 Sobic004G209900 Sobic005G002000--Sobic004G209900 Sobic005G095900 Sobic005G095900 Sobic005G002000--Sobic005G095900 Sobic005G002000--Sobic004G083100 Sobic005G002000--Sobic005G228000 Sobic001G403300 Sobic001G403300 Sobic005G002000--Sobic001G403300 Sobic004G207200 Sobic004G207200 Sobic005G002000--Sobic004G207200 Sobic002G345300 Sobic002G345300 Sobic005G002000--Sobic002G345300 Sobic003G380000 Sobic003G380000 Sobic005G002000--Sobic003G380000 Sobic003G135700 Sobic003G135700 Sobic005G002000--Sobic003G135700 Sobic001G357500 Sobic001G357500 Sobic009G232266--Sobic001G357500 Sobic009G236800 Sobic009G236800 Sobic009G232266--Sobic009G236800 Sobic009G232266--Sobic003G277500 Sobic003G271201 Sobic003G271201 Sobic009G232266--Sobic003G271201 Sobic008G113000 Sobic008G113000 Sobic009G232266--Sobic008G113000 Sobic003G041600 Sobic003G041600 Sobic009G232266--Sobic003G041600 Sobic005G155600 Sobic005G155600 Sobic009G232266--Sobic005G155600 Sobic004G010300 Sobic004G010300 Sobic009G232266--Sobic004G010300 Sobic010G178200 Sobic010G178200 Sobic009G232266--Sobic010G178200 Sobic004G335600 Sobic004G335600 Sobic007G131800--Sobic004G335600 Sobic007G131800--Sobic002G245900 Sobic007G133600 Sobic007G133600 Sobic007G131800--Sobic007G133600 Sobic009G008300 Sobic009G008300 Sobic007G131800--Sobic009G008300 Sobic010G099600 Sobic010G099600 Sobic007G131800--Sobic010G099600 Sobic007G131800--Sobic006G157200 Sobic004G042700 Sobic004G042700 Sobic007G131800--Sobic004G042700 Sobic003G118900 Sobic003G118900 Sobic007G131800--Sobic003G118900 Sobic006G206000 Sobic006G206000 Sobic007G131800--Sobic006G206000 Sobic007G025500 Sobic007G025500 Sobic004G179600--Sobic007G025500 Sobic007G107000 Sobic007G107000 Sobic004G179600--Sobic007G107000 Sobic002G212200 Sobic002G212200 Sobic004G179600--Sobic002G212200 Sobic002G319100 Sobic002G319100 Sobic004G179600--Sobic002G319100 Sobic009G023200 Sobic009G023200 Sobic004G179600--Sobic009G023200 Sobic003G362100 Sobic003G362100 Sobic004G179600--Sobic003G362100 Sobic004G179600--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic004G179600--Sobic001G019900 Sobic001G252300 Sobic001G252300 Sobic004G179600--Sobic001G252300 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic003G277500--Sobic004G195000 Sobic006G157200--Sobic004G335600 Sobic006G157200--Sobic005G076600 Sobic006G157200--Sobic004G157000 Sobic006G157200--Sobic004G035200 Sobic002G245800 Sobic002G245800 Sobic006G157200--Sobic002G245800 Sobic006G274700 Sobic006G274700 Sobic006G157200--Sobic006G274700 Sobic006G186700 Sobic006G186700 Sobic006G157200--Sobic006G186700 Sobic006G157200--Sobic010G099600 Sobic002G405600 Sobic002G405600 Sobic006G157200--Sobic002G405600 Sobic004G166400 Sobic004G166400 Sobic004G035200--Sobic004G166400 Sobic004G035200--Sobic004G179600 Sobic004G035200--Sobic006G157200 Sobic010G057100 Sobic010G057100 Sobic004G035200--Sobic010G057100 Sobic004G035200--Sobic004G335600 Sobic006G163100 Sobic006G163100 Sobic004G035200--Sobic006G163100 Sobic009G075900 Sobic009G075900 Sobic004G035200--Sobic009G075900 Sobic004G035200--Sobic006G274700 Sobic002G254200 Sobic002G254200 Sobic004G035200--Sobic002G254200
Octagon: transcription factors


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