Gene annotation
Transcriptome id Sobic.005G031100.1
Synonym Sb05g002640
Functional annotation embryogenesis transmembrane protein, putative, expressed
UniProt C5Y4H6
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os11g04830.1 : embryogenesis transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a033445
Brachypodium KQJ92311
Barley HORVU5Hr1G043010.1
Wheat TraesCS7A02G129400 , TraesCS5D02G140600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G149000 - -
2 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
3 Sobic.002G123700 - -
4 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
5 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.006G169600 expressed protein -
7 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
8 Sobic.002G196900 expressed protein -
9 Sobic.007G213500 expressed protein -
10 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
11 Sobic.003G079600 expressed protein -
12 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
13 Sobic.004G073166 - -
14 Sobic.001G093732 - -
15 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
16 Sobic.008G007200 lectin-like receptor kinase, putative, expressed -
17 Sobic.009G182000 cysteine proteinase inhibitor precursor protein, putative, expressed -
18 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic005G031100 Sobic005G031100 Sobic004G149000 Sobic004G149000 Sobic005G031100--Sobic004G149000 Sobic003G150700 Sobic003G150700 Sobic005G031100--Sobic003G150700 Sobic002G123700 Sobic002G123700 Sobic005G031100--Sobic002G123700 Sobic009G199900 Sobic009G199900 Sobic005G031100--Sobic009G199900 Sobic006G270300 Sobic006G270300 Sobic005G031100--Sobic006G270300 Sobic006G169600 Sobic006G169600 Sobic005G031100--Sobic006G169600 Sobic007G200300 Sobic007G200300 Sobic005G031100--Sobic007G200300 Sobic002G196900 Sobic002G196900 Sobic005G031100--Sobic002G196900 Sobic007G213500 Sobic007G213500 Sobic005G031100--Sobic007G213500 Sobic004G149000--Sobic007G200300 Sobic004G081000 Sobic004G081000 Sobic004G149000--Sobic004G081000 Sobic009G147600 Sobic009G147600 Sobic004G149000--Sobic009G147600 Sobic002G227100 Sobic002G227100 Sobic004G149000--Sobic002G227100 Sobic002G280001 Sobic002G280001 Sobic004G149000--Sobic002G280001 Sobic002G320700 Sobic002G320700 Sobic004G149000--Sobic002G320700 Sobic004G149000--Sobic006G270300 Sobic003G079600 Sobic003G079600 Sobic004G149000--Sobic003G079600 Sobic004G149000--Sobic006G169600 Sobic009G208000 Sobic009G208000 Sobic003G150700--Sobic009G208000 Sobic003G150700--Sobic003G079600 Sobic004G203600 Sobic004G203600 Sobic003G150700--Sobic004G203600 Sobic009G160100 Sobic009G160100 Sobic003G150700--Sobic009G160100 Sobic006G121200 Sobic006G121200 Sobic003G150700--Sobic006G121200 Sobic003G150700--Sobic006G169600 Sobic003G106100 Sobic003G106100 Sobic003G150700--Sobic003G106100 Sobic001G033200 Sobic001G033200 Sobic003G150700--Sobic001G033200 Sobic006G008500 Sobic006G008500 Sobic003G150700--Sobic006G008500 Sobic002G123700--Sobic006G121200 Sobic002G123700--Sobic007G213500 Sobic004G026000 Sobic004G026000 Sobic002G123700--Sobic004G026000 Sobic002G123700--Sobic004G203600 Sobic001G468200 Sobic001G468200 Sobic002G123700--Sobic001G468200 Sobic002G123700--Sobic002G320700 Sobic001G368000 Sobic001G368000 Sobic002G123700--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic002G123700--Sobic001G483200 Sobic009G235100 Sobic009G235100 Sobic002G123700--Sobic009G235100 Sobic001G104100 Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic009G199900--Sobic001G028500 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic004G350600 Sobic004G350600 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic006G270300--Sobic002G227100 Sobic006G270300--Sobic004G203600 Sobic006G270300--Sobic007G200300 Sobic006G270300--Sobic002G280001 Sobic006G270300--Sobic004G149000 Sobic006G270300--Sobic003G079600 Sobic006G270300--Sobic003G150700 Sobic006G270300--Sobic002G123700 Sobic006G111400 Sobic006G111400 Sobic006G270300--Sobic006G111400 Sobic005G063600 Sobic005G063600 Sobic006G169600--Sobic005G063600 Sobic006G169600--Sobic009G160100 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic006G169600--Sobic004G350600 Sobic006G169600--Sobic009G199900 Sobic004G181000 Sobic004G181000 Sobic006G169600--Sobic004G181000 Sobic002G234800 Sobic002G234800 Sobic006G169600--Sobic002G234800 Sobic006G169600--Sobic003G150700 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic007G200300--Sobic002G320700 Sobic007G200300--Sobic004G081000 Sobic007G200300--Sobic009G199900 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600 Sobic008G165800 Sobic008G165800 Sobic002G196900--Sobic008G165800 Sobic002G196900--Sobic005G031100 Sobic002G387400 Sobic002G387400 Sobic002G196900--Sobic002G387400 Sobic004G044500 Sobic004G044500 Sobic002G196900--Sobic004G044500 Sobic002G196900--Sobic007G213500 Sobic002G197400 Sobic002G197400 Sobic002G196900--Sobic002G197400 Sobic002G196900--Sobic001G104100 Sobic002G196900--Sobic009G199900 Sobic002G196900--Sobic006G121200 Sobic007G213500--Sobic004G026000 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic007G213500--Sobic003G106100 Sobic007G061500 Sobic007G061500 Sobic007G213500--Sobic007G061500 Sobic007G213500--Sobic001G104100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.