Gene annotation
Transcriptome id Sobic.005G049900.1
Synonym
Functional annotation -
UniProt C5Y5I0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G298201 - K11593: ELF2C, eukaryotic translation initiation factor 2C
2 Sobic.005G147900 - -
3 Sobic.002G034200 - -
4 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
5 Sobic.001G136150 - K11593: ELF2C, eukaryotic translation initiation factor 2C
6 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
7 Sobic.006G238500 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
8 Sobic.002G261400 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
9 Sobic.006G016800 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed -
10 Sobic.009G062600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase D, putative, expressed K01115: phospholipase D1/2
11 Sobic.003G445600 KIP1, putative, expressed -
12 Sobic.004G062300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
13 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.001G002400 OsSub55 - Putative Subtilisin homologue, expressed -
15 Sobic.006G164800 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
16 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
17 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.007G185801 - -
19 Sobic.007G161100 ENTH domain containing protein, expressed -
20 Sobic.003G305500 expressed protein -


Gene co-expression network
sample Sobic005G049900 Sobic005G049900 Sobic002G298201 Sobic002G298201 Sobic005G049900--Sobic002G298201 Sobic005G147900 Sobic005G147900 Sobic005G049900--Sobic005G147900 Sobic002G034200 Sobic002G034200 Sobic005G049900--Sobic002G034200 Sobic003G317000 Sobic003G317000 Sobic005G049900--Sobic003G317000 Sobic001G136150 Sobic001G136150 Sobic005G049900--Sobic001G136150 Sobic001G196400 Sobic001G196400 Sobic005G049900--Sobic001G196400 Sobic006G238500 Sobic006G238500 Sobic005G049900--Sobic006G238500 Sobic002G261400 Sobic002G261400 Sobic005G049900--Sobic002G261400 Sobic006G016800 Sobic006G016800 Sobic005G049900--Sobic006G016800 Sobic002G298201--Sobic003G317000 Sobic002G298201--Sobic005G049900 Sobic002G298201--Sobic001G196400 Sobic006G232700 Sobic006G232700 Sobic002G298201--Sobic006G232700 Sobic002G298201--Sobic001G136150 Sobic002G298201--Sobic002G034200 Sobic002G298201--Sobic005G147900 Sobic007G161100 Sobic007G161100 Sobic002G298201--Sobic007G161100 Sobic003G305500 Sobic003G305500 Sobic002G298201--Sobic003G305500 Sobic005G147900--Sobic002G261400 Sobic005G147900--Sobic006G016800 Sobic007G185801 Sobic007G185801 Sobic005G147900--Sobic007G185801 Sobic005G147900--Sobic002G034200 Sobic005G147900--Sobic005G049900 Sobic005G147900--Sobic001G136150 Sobic003G343000 Sobic003G343000 Sobic005G147900--Sobic003G343000 Sobic010G030500 Sobic010G030500 Sobic005G147900--Sobic010G030500 Sobic005G147900--Sobic003G317000 Sobic004G062300 Sobic004G062300 Sobic002G034200--Sobic004G062300 Sobic002G034200--Sobic001G136150 Sobic002G034200--Sobic006G238500 Sobic006G164800 Sobic006G164800 Sobic002G034200--Sobic006G164800 Sobic001G002400 Sobic001G002400 Sobic002G034200--Sobic001G002400 Sobic003G445600 Sobic003G445600 Sobic002G034200--Sobic003G445600 Sobic009G062600 Sobic009G062600 Sobic002G034200--Sobic009G062600 Sobic005G204600 Sobic005G204600 Sobic002G034200--Sobic005G204600 Sobic004G217200 Sobic004G217200 Sobic002G034200--Sobic004G217200 Sobic003G317000--Sobic001G196400 Sobic003G317000--Sobic003G305500 Sobic003G317000--Sobic009G062600 Sobic003G208900 Sobic003G208900 Sobic003G317000--Sobic003G208900 Sobic003G317000--Sobic001G002400 Sobic003G317000--Sobic003G343000 Sobic003G317000--Sobic006G164800 Sobic003G317000--Sobic006G232700 Sobic004G042800 Sobic004G042800 Sobic003G317000--Sobic004G042800 Sobic001G136150--Sobic002G034200 Sobic001G136150--Sobic006G238500 Sobic001G136150--Sobic006G016800 Sobic001G136150--Sobic005G204600 Sobic001G136150--Sobic004G062300 Sobic001G136150--Sobic006G164800 Sobic001G197050 Sobic001G197050 Sobic001G136150--Sobic001G197050 Sobic007G081701 Sobic007G081701 Sobic001G136150--Sobic007G081701 Sobic009G086600 Sobic009G086600 Sobic001G136150--Sobic009G086600 Sobic001G196400--Sobic003G317000 Sobic001G196400--Sobic006G232700 Sobic001G196400--Sobic007G161100 Sobic001G196400--Sobic003G208900 Sobic004G327000 Sobic004G327000 Sobic001G196400--Sobic004G327000 Sobic001G196400--Sobic004G042800 Sobic001G196400--Sobic003G305500 Sobic010G026200 Sobic010G026200 Sobic001G196400--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic001G196400--Sobic005G039000 Sobic007G145500 Sobic007G145500 Sobic006G238500--Sobic007G145500 Sobic001G063300 Sobic001G063300 Sobic006G238500--Sobic001G063300 Sobic001G261416 Sobic001G261416 Sobic006G238500--Sobic001G261416 Sobic010G216100 Sobic010G216100 Sobic006G238500--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic006G238500--Sobic007G014000 Sobic010G090200 Sobic010G090200 Sobic006G238500--Sobic010G090200 Sobic010G207800 Sobic010G207800 Sobic006G238500--Sobic010G207800 Sobic010G240300 Sobic010G240300 Sobic006G238500--Sobic010G240300 Sobic008G086500 Sobic008G086500 Sobic006G238500--Sobic008G086500 Sobic002G261400--Sobic005G147900 Sobic002G261400--Sobic002G034200 Sobic002G261400--Sobic006G016800 Sobic002G261400--Sobic001G136150 Sobic002G261400--Sobic007G185801 Sobic002G223650 Sobic002G223650 Sobic002G261400--Sobic002G223650 Sobic002G261400--Sobic003G343000 Sobic002G261400--Sobic003G317000 Sobic006G276801 Sobic006G276801 Sobic002G261400--Sobic006G276801 Sobic006G016800--Sobic005G147900 Sobic006G016800--Sobic001G136150 Sobic006G016800--Sobic002G261400 Sobic006G016800--Sobic002G034200 Sobic006G016800--Sobic007G185801 Sobic006G016800--Sobic006G238500 Sobic003G313200 Sobic003G313200 Sobic006G016800--Sobic003G313200 Sobic001G366700 Sobic001G366700 Sobic006G016800--Sobic001G366700 Sobic006G016800--Sobic003G343000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.