Gene annotation
Transcriptome id Sobic.006G016800.1
Synonym
Functional annotation OsSigP3 - Putative Type I Signal Peptidase homologue
employs a putative Ser/Lys catalytic dyad, expressed
UniProt C5YC78
Pfam PF10502
Panther DB PTHR12383 PTHR12383:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008236serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G08980 : Peptidase S24/S26A/S26B/S26C family protein
RAP-DB (Rice) LOC_Os04g08340.1 : OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed
MaizeGDB (Corn) Zm00025a012344 , Zm00025a012331
Brachypodium KQJ81413 , KQJ81414 , KQJ81415
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G147900 - -
2 Sobic.001G136150 - K11593: ELF2C, eukaryotic translation initiation factor 2C
3 Sobic.002G261400 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.002G034200 - -
5 Sobic.007G185801 - -
6 Sobic.006G238500 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
7 Sobic.003G313200 expressed protein -
8 Sobic.001G366700 villin protein, putative, expressed -
9 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.008G052800 - -
11 Sobic.005G204600 OsMADS68 - MADS-box family gene with MIKC , type-box, expressed -
12 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
13 Sobic.006G059100 POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.001G529800 phospholipase D, putative, expressed K01115: phospholipase D1/2
15 Sobic.007G139300 exostosin family domain containing protein, expressed -
16 Sobic.007G042800 expressed protein -
17 Sobic.001G525600 fringe-related protein, putative, expressed -
18 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
19 Sobic.002G402900 expressed protein -
20 Sobic.008G169101 - -


Gene co-expression network
sample Sobic006G016800 Sobic006G016800 Sobic005G147900 Sobic005G147900 Sobic006G016800--Sobic005G147900 Sobic001G136150 Sobic001G136150 Sobic006G016800--Sobic001G136150 Sobic002G261400 Sobic002G261400 Sobic006G016800--Sobic002G261400 Sobic002G034200 Sobic002G034200 Sobic006G016800--Sobic002G034200 Sobic007G185801 Sobic007G185801 Sobic006G016800--Sobic007G185801 Sobic006G238500 Sobic006G238500 Sobic006G016800--Sobic006G238500 Sobic003G313200 Sobic003G313200 Sobic006G016800--Sobic003G313200 Sobic001G366700 Sobic001G366700 Sobic006G016800--Sobic001G366700 Sobic003G343000 Sobic003G343000 Sobic006G016800--Sobic003G343000 Sobic005G147900--Sobic002G261400 Sobic005G147900--Sobic006G016800 Sobic005G147900--Sobic007G185801 Sobic005G147900--Sobic002G034200 Sobic005G049900 Sobic005G049900 Sobic005G147900--Sobic005G049900 Sobic005G147900--Sobic001G136150 Sobic005G147900--Sobic003G343000 Sobic010G030500 Sobic010G030500 Sobic005G147900--Sobic010G030500 Sobic003G317000 Sobic003G317000 Sobic005G147900--Sobic003G317000 Sobic001G136150--Sobic002G034200 Sobic001G136150--Sobic006G238500 Sobic001G136150--Sobic006G016800 Sobic005G204600 Sobic005G204600 Sobic001G136150--Sobic005G204600 Sobic004G062300 Sobic004G062300 Sobic001G136150--Sobic004G062300 Sobic006G164800 Sobic006G164800 Sobic001G136150--Sobic006G164800 Sobic001G197050 Sobic001G197050 Sobic001G136150--Sobic001G197050 Sobic007G081701 Sobic007G081701 Sobic001G136150--Sobic007G081701 Sobic009G086600 Sobic009G086600 Sobic001G136150--Sobic009G086600 Sobic002G261400--Sobic005G147900 Sobic002G261400--Sobic002G034200 Sobic002G261400--Sobic006G016800 Sobic002G261400--Sobic001G136150 Sobic002G261400--Sobic007G185801 Sobic002G223650 Sobic002G223650 Sobic002G261400--Sobic002G223650 Sobic002G261400--Sobic003G343000 Sobic002G261400--Sobic003G317000 Sobic006G276801 Sobic006G276801 Sobic002G261400--Sobic006G276801 Sobic002G034200--Sobic004G062300 Sobic002G034200--Sobic001G136150 Sobic002G034200--Sobic006G238500 Sobic002G034200--Sobic006G164800 Sobic001G002400 Sobic001G002400 Sobic002G034200--Sobic001G002400 Sobic003G445600 Sobic003G445600 Sobic002G034200--Sobic003G445600 Sobic009G062600 Sobic009G062600 Sobic002G034200--Sobic009G062600 Sobic002G034200--Sobic005G204600 Sobic004G217200 Sobic004G217200 Sobic002G034200--Sobic004G217200 Sobic007G185801--Sobic003G343000 Sobic003G208900 Sobic003G208900 Sobic007G185801--Sobic003G208900 Sobic003G305500 Sobic003G305500 Sobic007G185801--Sobic003G305500 Sobic007G139300 Sobic007G139300 Sobic007G185801--Sobic007G139300 Sobic005G039000 Sobic005G039000 Sobic007G185801--Sobic005G039000 Sobic006G176200 Sobic006G176200 Sobic007G185801--Sobic006G176200 Sobic006G059100 Sobic006G059100 Sobic007G185801--Sobic006G059100 Sobic009G259600 Sobic009G259600 Sobic007G185801--Sobic009G259600 Sobic001G473700 Sobic001G473700 Sobic007G185801--Sobic001G473700 Sobic007G145500 Sobic007G145500 Sobic006G238500--Sobic007G145500 Sobic001G063300 Sobic001G063300 Sobic006G238500--Sobic001G063300 Sobic001G261416 Sobic001G261416 Sobic006G238500--Sobic001G261416 Sobic010G216100 Sobic010G216100 Sobic006G238500--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic006G238500--Sobic007G014000 Sobic010G090200 Sobic010G090200 Sobic006G238500--Sobic010G090200 Sobic010G207800 Sobic010G207800 Sobic006G238500--Sobic010G207800 Sobic010G240300 Sobic010G240300 Sobic006G238500--Sobic010G240300 Sobic008G086500 Sobic008G086500 Sobic006G238500--Sobic008G086500 Sobic006G215500 Sobic006G215500 Sobic003G313200--Sobic006G215500 Sobic004G071900 Sobic004G071900 Sobic003G313200--Sobic004G071900 Sobic004G099200 Sobic004G099200 Sobic003G313200--Sobic004G099200 Sobic001G135950 Sobic001G135950 Sobic003G313200--Sobic001G135950 Sobic001G525600 Sobic001G525600 Sobic003G313200--Sobic001G525600 Sobic006G022700 Sobic006G022700 Sobic003G313200--Sobic006G022700 Sobic002G279900 Sobic002G279900 Sobic003G313200--Sobic002G279900 Sobic002G125100 Sobic002G125100 Sobic003G313200--Sobic002G125100 Sobic009G105100 Sobic009G105100 Sobic003G313200--Sobic009G105100 Sobic001G366700--Sobic007G139300 Sobic003G243300 Sobic003G243300 Sobic001G366700--Sobic003G243300 Sobic001G366700--Sobic002G279900 Sobic001G366700--Sobic003G313200 Sobic001G366700--Sobic004G099200 Sobic001G529800 Sobic001G529800 Sobic001G366700--Sobic001G529800 Sobic009G158400 Sobic009G158400 Sobic001G366700--Sobic009G158400 Sobic001G037066 Sobic001G037066 Sobic001G366700--Sobic001G037066 Sobic006G062100 Sobic006G062100 Sobic001G366700--Sobic006G062100 Sobic003G343000--Sobic003G305500 Sobic008G134600 Sobic008G134600 Sobic003G343000--Sobic008G134600 Sobic008G124301 Sobic008G124301 Sobic003G343000--Sobic008G124301 Sobic003G343300 Sobic003G343300 Sobic003G343000--Sobic003G343300 Sobic003G343000--Sobic006G059100 Sobic001G392650 Sobic001G392650 Sobic003G343000--Sobic001G392650 Sobic003G343000--Sobic003G445600 Sobic003G343000--Sobic006G062100 Sobic003G160600 Sobic003G160600 Sobic003G343000--Sobic003G160600
Octagon: transcription factors


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