Gene annotation
Transcriptome id Sobic.005G086650.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHD3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G225500 - -
2 Sobic.001G432500 expressed protein -
3 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
5 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.002G087500 - -
7 Sobic.001G291500 - -
8 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
9 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
10 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
12 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
13 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
14 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
15 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
16 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.004G143801 - -
18 Sobic.005G060700 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
19 Sobic.005G182701 - -
20 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -


Gene co-expression network
sample Sobic005G086650 Sobic005G086650 Sobic010G225500 Sobic010G225500 Sobic005G086650--Sobic010G225500 Sobic001G432500 Sobic001G432500 Sobic005G086650--Sobic001G432500 Sobic005G190900 Sobic005G190900 Sobic005G086650--Sobic005G190900 Sobic002G298400 Sobic002G298400 Sobic005G086650--Sobic002G298400 Sobic002G040400 Sobic002G040400 Sobic005G086650--Sobic002G040400 Sobic002G087500 Sobic002G087500 Sobic005G086650--Sobic002G087500 Sobic001G291500 Sobic001G291500 Sobic005G086650--Sobic001G291500 Sobic002G391700 Sobic002G391700 Sobic005G086650--Sobic002G391700 Sobic008G028600 Sobic008G028600 Sobic005G086650--Sobic008G028600 Sobic010G225500--Sobic001G432500 Sobic002G202700 Sobic002G202700 Sobic010G225500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic010G225500--Sobic009G115300 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic009G115400 Sobic009G115400 Sobic010G225500--Sobic009G115400 Sobic006G005500 Sobic006G005500 Sobic010G225500--Sobic006G005500 Sobic002G108400 Sobic002G108400 Sobic010G225500--Sobic002G108400 Sobic001G125700 Sobic001G125700 Sobic010G225500--Sobic001G125700 Sobic001G432500--Sobic008G028600 Sobic001G432500--Sobic002G040400 Sobic001G432500--Sobic002G298400 Sobic001G432500--Sobic002G087500 Sobic005G219000 Sobic005G219000 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic007G076000 Sobic007G076000 Sobic001G432500--Sobic007G076000 Sobic001G019300 Sobic001G019300 Sobic005G190900--Sobic001G019300 Sobic005G190900--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G190900--Sobic002G265400 Sobic005G190900--Sobic001G432500 Sobic003G106500 Sobic003G106500 Sobic005G190900--Sobic003G106500 Sobic005G063900 Sobic005G063900 Sobic005G190900--Sobic005G063900 Sobic003G135800 Sobic003G135800 Sobic005G190900--Sobic003G135800 Sobic005G190900--Sobic010G225500 Sobic002G371900 Sobic002G371900 Sobic005G190900--Sobic002G371900 Sobic002G298400--Sobic002G040400 Sobic002G298400--Sobic002G087500 Sobic002G298400--Sobic002G391700 Sobic002G298400--Sobic008G028600 Sobic002G093600 Sobic002G093600 Sobic002G298400--Sobic002G093600 Sobic008G077800 Sobic008G077800 Sobic002G298400--Sobic008G077800 Sobic004G143801 Sobic004G143801 Sobic002G298400--Sobic004G143801 Sobic008G028566 Sobic008G028566 Sobic002G298400--Sobic008G028566 Sobic002G298400--Sobic005G219000 Sobic002G040400--Sobic008G028600 Sobic002G040400--Sobic002G087500 Sobic002G040400--Sobic002G298400 Sobic002G040400--Sobic002G391700 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic002G040400--Sobic001G125700 Sobic002G040400--Sobic008G077800 Sobic002G040400--Sobic007G076000 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic006G007100 Sobic006G007100 Sobic001G291500--Sobic006G007100 Sobic005G219100 Sobic005G219100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic006G005400 Sobic006G005400 Sobic001G291500--Sobic006G005400 Sobic001G291500--Sobic001G125700 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G291500--Sobic001G432500 Sobic001G291500--Sobic008G077800 Sobic002G391700--Sobic002G093600 Sobic002G391700--Sobic002G087500 Sobic002G391700--Sobic002G298400 Sobic002G391700--Sobic002G040400 Sobic002G391700--Sobic008G077800 Sobic002G391700--Sobic008G028600 Sobic002G391700--Sobic006G007300 Sobic002G391700--Sobic008G028566 Sobic002G391700--Sobic005G219000 Sobic008G028600--Sobic002G040400 Sobic008G028600--Sobic005G219000 Sobic008G028600--Sobic002G087500 Sobic008G028600--Sobic006G005500 Sobic008G028600--Sobic001G125700 Sobic008G028600--Sobic002G391700 Sobic008G028600--Sobic002G298400 Sobic008G028600--Sobic008G077800 Sobic008G028600--Sobic005G219100
Octagon: transcription factors


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