Gene annotation
| Transcriptome id |
Sobic.005G109500.1 |
| Synonym |
CAS1 |
| Functional annotation |
cycloartenol synthase, putative, expressed |
| UniProt |
A0A1B6PRM0 |
| Pfam |
PF00432 |
| Panther DB |
PTHR11764 |
| NCBI CDD |
- |
| KEGG Orthology |
- |
| Gene Ontology |
GO:0003824; catalytic activity |
Orthologs (automatic annotation)
| TAIR |
AT2G07050 : cycloartenol synthase 1 |
| RAP-DB (Rice) |
LOC_Os02g04710.1 : cycloartenol synthase, putative, expressed |
| MaizeGDB (Corn) |
Zm00025a018946
, Zm00025a034899 |
| Brachypodium |
- |
| Barley |
HORVU5Hr1G122220.9
, HORVU5Hr1G122220.4
, HORVU5Hr1G122220.5
, HORVU5Hr1G122220.6
, HORVU5Hr1G122220.7
, HORVU5Hr1G122220.1
, HORVU5Hr1G122220.2
, HORVU5Hr1G122220.3 |
| Wheat |
TraesCS6A02G110200
, TraesCS6A02G110300
, TraesCS6A02G110800
, TraesCS2D02G387000 |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.009G051101 |
- |
- |
| 2 |
Sobic.002G010700 |
peroxidase precursor, putative, expressed |
K00430: peroxidase |
| 3 |
Sobic.005G125800 |
- |
- |
| 4 |
Sobic.005G042300 |
expressed protein |
- |
| 5 |
Sobic.005G146200 |
- |
- |
| 6 |
Sobic.007G109400 |
response regulator receiver domain containing protein, expressed |
K14492: two-component response regulator ARR-A family |
| 7 |
Sobic.003G438300 |
- |
- |
| 8 |
Sobic.005G174700 |
DEFL74 - Defensin and Defensin-like DEFL family, expressed |
- |
| 9 |
Sobic.002G061200 |
OsFBX237 - F-box domain containing protein, expressed |
- |
| 10 |
Sobic.004G198550 |
- |
- |
| 11 |
Sobic.009G039500 |
myb-like DNA-binding domain, SHAQKYF class family protein, expressed |
- |
| 12 |
Sobic.010G274200 |
ZOS6-11 - C2H2 zinc finger protein, expressed |
- |
| 13 |
Sobic.009G040100 |
myb-like DNA-binding domain, SHAQKYF class family protein, expressed |
- |
| 14 |
Sobic.005G147700 |
- |
- |
| 15 |
Sobic.002G089600 |
SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DEF8 - Defensin and Defensin-like DEFL family, expressed |
- |
| 16 |
Sobic.005G109800 |
cytochrome P450, putative, expressed |
K05917: sterol 14alpha-demethylase |
| 17 |
Sobic.010G069800 |
cytochrome P450 72A1, putative, expressed |
K15639: CYP734A1, PHYB activation tagged suppressor 1 |
| 18 |
Sobic.005G173532 |
- |
- |
| 19 |
Sobic.005G221300 |
- |
- |
| 20 |
Sobic.010G195600 |
reductase, putative, expressed |
- |
Gene co-expression network
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Octagon: transcription factors