Gene annotation
Transcriptome id Sobic.005G186800.2,Sobic.005G186800.1
Synonym SCPL27, Sb05g024460
Functional annotation OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
UniProt Q9XE83 , A0A1B6PTD7 , A0A1B6PTD8
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF71
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K08249; hydroxymandelonitrile lyase
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G35780 : serine carboxypeptidase-like 26
RAP-DB (Rice) LOC_Os01g06490.1 : OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a026989
Brachypodium -
Barley -
Wheat TraesCS6B02G388600 , TraesCS3B02G155800 , TraesCS5B02G242500
Populus -


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cDNA sequences
Sobic.005G186800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
2 Sobic.009G202400 expressed protein -
3 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
4 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.002G001800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
6 Sobic.004G343100 YCF37, putative, expressed -
7 Sobic.003G106500 expressed protein -
8 Sobic.003G096500 protein kinase domain containing protein, expressed -
9 Sobic.006G243200 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
10 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
11 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
12 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
13 Sobic.004G096100 expressed protein -
14 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
15 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
16 Sobic.005G093300 - -
17 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.001G525900 homeobox domain containing protein, expressed -
19 Sobic.001G291500 - -
20 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic005G186800 Sobic005G186800 Sobic002G281000 Sobic002G281000 Sobic005G186800--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic005G186800--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic005G186800--Sobic002G371900 Sobic008G063100 Sobic008G063100 Sobic005G186800--Sobic008G063100 Sobic002G001800 Sobic002G001800 Sobic005G186800--Sobic002G001800 Sobic004G343100 Sobic004G343100 Sobic005G186800--Sobic004G343100 Sobic003G106500 Sobic003G106500 Sobic005G186800--Sobic003G106500 Sobic003G096500 Sobic003G096500 Sobic005G186800--Sobic003G096500 Sobic006G243200 Sobic006G243200 Sobic005G186800--Sobic006G243200 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic001G404500 Sobic001G404500 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic007G037800 Sobic007G037800 Sobic009G202400--Sobic007G037800 Sobic009G202400--Sobic002G281000 Sobic004G210601 Sobic004G210601 Sobic009G202400--Sobic004G210601 Sobic009G202400--Sobic005G097800 Sobic005G192600 Sobic005G192600 Sobic009G202400--Sobic005G192600 Sobic005G167500 Sobic005G167500 Sobic009G202400--Sobic005G167500 Sobic005G093300 Sobic005G093300 Sobic009G202400--Sobic005G093300 Sobic009G202400--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic009G202400--Sobic004G019400 Sobic002G371900--Sobic002G001800 Sobic002G371900--Sobic003G106500 Sobic001G198700 Sobic001G198700 Sobic002G371900--Sobic001G198700 Sobic002G371900--Sobic002G281000 Sobic002G265400 Sobic002G265400 Sobic002G371900--Sobic002G265400 Sobic002G371900--Sobic004G063200 Sobic002G371900--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic002G371900--Sobic005G190900 Sobic003G135800 Sobic003G135800 Sobic002G371900--Sobic003G135800 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic002G001800--Sobic002G371900 Sobic002G001800--Sobic003G106500 Sobic002G001800--Sobic002G281000 Sobic004G096100 Sobic004G096100 Sobic002G001800--Sobic004G096100 Sobic001G377500 Sobic001G377500 Sobic002G001800--Sobic001G377500 Sobic002G001800--Sobic008G063100 Sobic002G001800--Sobic001G198700 Sobic002G001800--Sobic001G019300 Sobic002G001800--Sobic004G063200 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic004G343100--Sobic002G281000 Sobic003G106500--Sobic001G198700 Sobic008G073400 Sobic008G073400 Sobic003G106500--Sobic008G073400 Sobic003G106500--Sobic002G001800 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic003G106500--Sobic005G190900 Sobic003G106500--Sobic002G281000 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700 Sobic006G060800 Sobic006G060800 Sobic003G096500--Sobic006G060800 Sobic001G201800 Sobic001G201800 Sobic003G096500--Sobic001G201800 Sobic003G096500--Sobic004G019400 Sobic004G078600 Sobic004G078600 Sobic003G096500--Sobic004G078600 Sobic009G252100 Sobic009G252100 Sobic003G096500--Sobic009G252100 Sobic008G060300 Sobic008G060300 Sobic003G096500--Sobic008G060300 Sobic003G096500--Sobic004G063200 Sobic005G193600 Sobic005G193600 Sobic003G096500--Sobic005G193600 Sobic003G410900 Sobic003G410900 Sobic003G096500--Sobic003G410900 Sobic005G186700 Sobic005G186700 Sobic006G243200--Sobic005G186700 Sobic006G243200--Sobic003G096500 Sobic004G051100 Sobic004G051100 Sobic006G243200--Sobic004G051100 Sobic006G164300 Sobic006G164300 Sobic006G243200--Sobic006G164300 Sobic006G020200 Sobic006G020200 Sobic006G243200--Sobic006G020200 Sobic006G123500 Sobic006G123500 Sobic006G243200--Sobic006G123500 Sobic006G243200--Sobic009G202400 Sobic004G019100 Sobic004G019100 Sobic006G243200--Sobic004G019100 Sobic006G243200--Sobic004G019400
Octagon: transcription factors


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