Gene annotation
Transcriptome id Sobic.006G003300.1
Synonym Sb06g000495
Functional annotation adenylate kinase, putative, expressed
UniProt C5YBA1
Pfam PF13238
Panther DB PTHR23359 PTHR23359:SF100
NCBI CDD KOG3079; Uridylate kinase/adenylate kinase
KEGG Orthology K13800; CMPK1, UMP-CMP kinase
Gene Ontology GO:0006139; nucleobase-containing compound metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT4G25280 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os04g01530.2 : adenylate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a055487
Brachypodium KQJ81672 , KQJ81671
Barley HORVU2Hr1G005480.10 , HORVU2Hr1G005480.7 , HORVU2Hr1G005480.6 , HORVU2Hr1G005480.5 , HORVU2Hr1G005480.4 , HORVU2Hr1G005480.3 , HORVU2Hr1G005480.2 , HORVU2Hr1G005480.1 , HORVU2Hr1G005480.9 , HORVU2Hr1G005480.8 , HORVU2Hr1G005480.13 , HORVU2Hr1G005480.12 , HORVU2Hr1G005480.11
Wheat TraesCS2B02G049600 , TraesCS2D02G035600 , TraesCS2A02G036500
Populus -


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cDNA sequences
Sobic.006G003300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G196300 CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
2 Sobic.010G057600 expressed protein -
3 Sobic.003G379000 OsMADS2 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
4 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
5 Sobic.001G207900 - -
6 Sobic.006G264700 - -
7 Sobic.001G367301 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
8 Sobic.004G025900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.006G115800 fasciclin domain containing protein, expressed -
10 Sobic.003G072700 expressed protein -
11 Sobic.001G174400 - -
12 Sobic.008G057600 WD-40 repeat family protein, putative, expressed -
13 Sobic.001G442400 - -
14 Sobic.005G099100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
15 Sobic.001G135700 - -
16 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
17 Sobic.004G062200 expressed protein -
18 Sobic.010G263400 expressed protein -
19 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
20 Sobic.004G014500 THION20 - Plant thionin family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic006G003300 Sobic006G003300 Sobic010G196300 Sobic010G196300 Sobic006G003300--Sobic010G196300 Sobic010G057600 Sobic010G057600 Sobic006G003300--Sobic010G057600 Sobic003G379000 Sobic003G379000 Sobic006G003300--Sobic003G379000 Sobic009G201000 Sobic009G201000 Sobic006G003300--Sobic009G201000 Sobic001G207900 Sobic001G207900 Sobic006G003300--Sobic001G207900 Sobic006G264700 Sobic006G264700 Sobic006G003300--Sobic006G264700 Sobic001G367301 Sobic001G367301 Sobic006G003300--Sobic001G367301 Sobic004G025900 Sobic004G025900 Sobic006G003300--Sobic004G025900 Sobic006G115800 Sobic006G115800 Sobic006G003300--Sobic006G115800 Sobic010G196300--Sobic006G264700 Sobic008G136700 Sobic008G136700 Sobic010G196300--Sobic008G136700 Sobic010G196300--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic010G196300--Sobic001G315000 Sobic006G028600 Sobic006G028600 Sobic010G196300--Sobic006G028600 Sobic001G229100 Sobic001G229100 Sobic010G196300--Sobic001G229100 Sobic005G217101 Sobic005G217101 Sobic010G196300--Sobic005G217101 Sobic004G002300 Sobic004G002300 Sobic010G196300--Sobic004G002300 Sobic010G196300--Sobic006G115800 Sobic003G048400 Sobic003G048400 Sobic010G057600--Sobic003G048400 Sobic009G180600 Sobic009G180600 Sobic010G057600--Sobic009G180600 Sobic010G057600--Sobic001G207900 Sobic010G057600--Sobic003G379000 Sobic004G355750 Sobic004G355750 Sobic010G057600--Sobic004G355750 Sobic001G442400 Sobic001G442400 Sobic010G057600--Sobic001G442400 Sobic004G336800 Sobic004G336800 Sobic010G057600--Sobic004G336800 Sobic004G014500 Sobic004G014500 Sobic010G057600--Sobic004G014500 Sobic005G181500 Sobic005G181500 Sobic010G057600--Sobic005G181500 Sobic006G256400 Sobic006G256400 Sobic003G379000--Sobic006G256400 Sobic002G188300 Sobic002G188300 Sobic003G379000--Sobic002G188300 Sobic006G200300 Sobic006G200300 Sobic003G379000--Sobic006G200300 Sobic007G193600 Sobic007G193600 Sobic003G379000--Sobic007G193600 Sobic007G133100 Sobic007G133100 Sobic003G379000--Sobic007G133100 Sobic008G155000 Sobic008G155000 Sobic003G379000--Sobic008G155000 Sobic004G003300 Sobic004G003300 Sobic003G379000--Sobic004G003300 Sobic002G307400 Sobic002G307400 Sobic003G379000--Sobic002G307400 Sobic003G379000--Sobic001G442400 Sobic003G352900 Sobic003G352900 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic006G265800 Sobic006G265800 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic006G156400 Sobic006G156400 Sobic009G201000--Sobic006G156400 Sobic001G207900--Sobic001G442400 Sobic006G096700 Sobic006G096700 Sobic001G207900--Sobic006G096700 Sobic002G007900 Sobic002G007900 Sobic001G207900--Sobic002G007900 Sobic004G008500 Sobic004G008500 Sobic001G207900--Sobic004G008500 Sobic010G246132 Sobic010G246132 Sobic001G207900--Sobic010G246132 Sobic005G068500 Sobic005G068500 Sobic001G207900--Sobic005G068500 Sobic010G257700 Sobic010G257700 Sobic001G207900--Sobic010G257700 Sobic002G121800 Sobic002G121800 Sobic001G207900--Sobic002G121800 Sobic001G539940 Sobic001G539940 Sobic001G207900--Sobic001G539940 Sobic004G323500 Sobic004G323500 Sobic006G264700--Sobic004G323500 Sobic006G264700--Sobic006G115800 Sobic006G264700--Sobic001G229100 Sobic006G264700--Sobic004G025900 Sobic006G264700--Sobic001G315000 Sobic006G264700--Sobic005G217101 Sobic006G264700--Sobic006G028600 Sobic006G264700--Sobic010G196300 Sobic001G500900 Sobic001G500900 Sobic006G264700--Sobic001G500900 Sobic001G225800 Sobic001G225800 Sobic001G367301--Sobic001G225800 Sobic008G159701 Sobic008G159701 Sobic001G367301--Sobic008G159701 Sobic005G110460 Sobic005G110460 Sobic001G367301--Sobic005G110460 Sobic004G290600 Sobic004G290600 Sobic001G367301--Sobic004G290600 Sobic010G003200 Sobic010G003200 Sobic001G367301--Sobic010G003200 Sobic004G134900 Sobic004G134900 Sobic001G367301--Sobic004G134900 Sobic001G103100 Sobic001G103100 Sobic001G367301--Sobic001G103100 Sobic002G372000 Sobic002G372000 Sobic001G367301--Sobic002G372000 Sobic006G204500 Sobic006G204500 Sobic001G367301--Sobic006G204500 Sobic004G025900--Sobic001G315000 Sobic004G025900--Sobic006G028600 Sobic004G025900--Sobic006G264700 Sobic004G025900--Sobic005G217101 Sobic004G025900--Sobic004G002300 Sobic004G025900--Sobic001G500900 Sobic004G025900--Sobic006G115800 Sobic001G539820 Sobic001G539820 Sobic004G025900--Sobic001G539820 Sobic010G190500 Sobic010G190500 Sobic004G025900--Sobic010G190500 Sobic006G115800--Sobic005G217101 Sobic004G041800 Sobic004G041800 Sobic006G115800--Sobic004G041800 Sobic001G466100 Sobic001G466100 Sobic006G115800--Sobic001G466100 Sobic010G034300 Sobic010G034300 Sobic006G115800--Sobic010G034300 Sobic004G080000 Sobic004G080000 Sobic006G115800--Sobic004G080000 Sobic009G252000 Sobic009G252000 Sobic006G115800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic006G115800--Sobic009G091000 Sobic010G254100 Sobic010G254100 Sobic006G115800--Sobic010G254100 Sobic001G036200 Sobic001G036200 Sobic006G115800--Sobic001G036200
Octagon: transcription factors


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