Gene annotation
Transcriptome id Sobic.006G041432.1,Sobic.006G041432.2
Synonym -
Functional annotation -
UniProt A0A1Z5RD00 , A0A1Z5RC32
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G288301 - -
2 Sobic.006G048700 "fatty acid desaturase, up-regulated under severe drought stress"(PubMedID : 24655390)@Acyl-acyl-carrier-protein desaturase (Os)(PubMedID : 27208977)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
3 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
4 Sobic.005G019500 - -
5 Sobic.006G045700 - -
6 Sobic.010G124001 - -
7 Sobic.010G225226 - -
8 Sobic.002G203200 - -
9 Sobic.006G060100 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
10 Sobic.004G233300 - -
11 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
12 Sobic.004G196700 expressed protein -
13 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
14 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
15 Sobic.008G013600 - -
16 Sobic.001G272532 - -
17 Sobic.004G279300 photoperiodic flowering time gene(PubMedID : 22394582)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
18 Sobic.003G174475 - -
19 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
20 Sobic.001G271900 - -


Gene co-expression network
sample Sobic006G041432 Sobic006G041432 Sobic001G288301 Sobic001G288301 Sobic006G041432--Sobic001G288301 Sobic006G048700 Sobic006G048700 Sobic006G041432--Sobic006G048700 Sobic002G165300 Sobic002G165300 Sobic006G041432--Sobic002G165300 Sobic005G019500 Sobic005G019500 Sobic006G041432--Sobic005G019500 Sobic006G045700 Sobic006G045700 Sobic006G041432--Sobic006G045700 Sobic010G124001 Sobic010G124001 Sobic006G041432--Sobic010G124001 Sobic010G225226 Sobic010G225226 Sobic006G041432--Sobic010G225226 Sobic002G203200 Sobic002G203200 Sobic006G041432--Sobic002G203200 Sobic006G060100 Sobic006G060100 Sobic006G041432--Sobic006G060100 Sobic001G272532 Sobic001G272532 Sobic001G288301--Sobic001G272532 Sobic001G288301--Sobic010G225226 Sobic009G104201 Sobic009G104201 Sobic001G288301--Sobic009G104201 Sobic010G057700 Sobic010G057700 Sobic001G288301--Sobic010G057700 Sobic004G132150 Sobic004G132150 Sobic001G288301--Sobic004G132150 Sobic001G288301--Sobic005G019500 Sobic005G077466 Sobic005G077466 Sobic001G288301--Sobic005G077466 Sobic001G271900 Sobic001G271900 Sobic001G288301--Sobic001G271900 Sobic007G178700 Sobic007G178700 Sobic001G288301--Sobic007G178700 Sobic005G149500 Sobic005G149500 Sobic006G048700--Sobic005G149500 Sobic009G040700 Sobic009G040700 Sobic006G048700--Sobic009G040700 Sobic003G187400 Sobic003G187400 Sobic006G048700--Sobic003G187400 Sobic003G008500 Sobic003G008500 Sobic006G048700--Sobic003G008500 Sobic009G022200 Sobic009G022200 Sobic006G048700--Sobic009G022200 Sobic006G173100 Sobic006G173100 Sobic006G048700--Sobic006G173100 Sobic007G011400 Sobic007G011400 Sobic006G048700--Sobic007G011400 Sobic004G270000 Sobic004G270000 Sobic006G048700--Sobic004G270000 Sobic006G048700--Sobic002G165300 Sobic009G156000 Sobic009G156000 Sobic002G165300--Sobic009G156000 Sobic004G196700 Sobic004G196700 Sobic002G165300--Sobic004G196700 Sobic002G165300--Sobic005G149500 Sobic007G211000 Sobic007G211000 Sobic002G165300--Sobic007G211000 Sobic010G199600 Sobic010G199600 Sobic002G165300--Sobic010G199600 Sobic007G078000 Sobic007G078000 Sobic002G165300--Sobic007G078000 Sobic002G284200 Sobic002G284200 Sobic002G165300--Sobic002G284200 Sobic010G026400 Sobic010G026400 Sobic002G165300--Sobic010G026400 Sobic007G037100 Sobic007G037100 Sobic002G165300--Sobic007G037100 Sobic005G019500--Sobic001G288301 Sobic001G388250 Sobic001G388250 Sobic005G019500--Sobic001G388250 Sobic004G149600 Sobic004G149600 Sobic005G019500--Sobic004G149600 Sobic005G019500--Sobic001G272532 Sobic004G010151 Sobic004G010151 Sobic005G019500--Sobic004G010151 Sobic005G019500--Sobic010G225226 Sobic004G204200 Sobic004G204200 Sobic005G019500--Sobic004G204200 Sobic005G110300 Sobic005G110300 Sobic005G019500--Sobic005G110300 Sobic009G092800 Sobic009G092800 Sobic005G019500--Sobic009G092800 Sobic006G045700--Sobic004G132150 Sobic005G043800 Sobic005G043800 Sobic006G045700--Sobic005G043800 Sobic010G164350 Sobic010G164350 Sobic006G045700--Sobic010G164350 Sobic010G246900 Sobic010G246900 Sobic006G045700--Sobic010G246900 Sobic006G045700--Sobic006G048700 Sobic008G025900 Sobic008G025900 Sobic006G045700--Sobic008G025900 Sobic005G110427 Sobic005G110427 Sobic006G045700--Sobic005G110427 Sobic010G100366 Sobic010G100366 Sobic006G045700--Sobic010G100366 Sobic005G141801 Sobic005G141801 Sobic006G045700--Sobic005G141801 Sobic010G124001--Sobic007G211000 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic004G112500 Sobic004G112500 Sobic010G124001--Sobic004G112500 Sobic006G082600 Sobic006G082600 Sobic010G124001--Sobic006G082600 Sobic010G124001--Sobic001G271900 Sobic001G543900 Sobic001G543900 Sobic010G124001--Sobic001G543900 Sobic007G037900 Sobic007G037900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic010G225226--Sobic001G272532 Sobic010G225226--Sobic009G104201 Sobic003G020000 Sobic003G020000 Sobic010G225226--Sobic003G020000 Sobic010G225226--Sobic001G288301 Sobic010G225226--Sobic007G178700 Sobic003G087400 Sobic003G087400 Sobic010G225226--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic010G225226--Sobic004G007100 Sobic003G176400 Sobic003G176400 Sobic010G225226--Sobic003G176400 Sobic002G144966 Sobic002G144966 Sobic010G225226--Sobic002G144966 Sobic002G203200--Sobic010G124001 Sobic002G203200--Sobic007G037900 Sobic001G067850 Sobic001G067850 Sobic002G203200--Sobic001G067850 Sobic002G203200--Sobic006G082600 Sobic009G140500 Sobic009G140500 Sobic002G203200--Sobic009G140500 Sobic005G130200 Sobic005G130200 Sobic002G203200--Sobic005G130200 Sobic002G203200--Sobic002G165300 Sobic002G203200--Sobic007G211000 Sobic002G203200--Sobic004G196700 Sobic006G060100--Sobic003G187400 Sobic003G268300 Sobic003G268300 Sobic006G060100--Sobic003G268300 Sobic006G060100--Sobic005G149500 Sobic006G060100--Sobic003G176400 Sobic001G094000 Sobic001G094000 Sobic006G060100--Sobic001G094000 Sobic003G422300 Sobic003G422300 Sobic006G060100--Sobic003G422300 Sobic006G080300 Sobic006G080300 Sobic006G060100--Sobic006G080300 Sobic002G157300 Sobic002G157300 Sobic006G060100--Sobic002G157300 Sobic006G060100--Sobic007G011400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.