Gene annotation
Transcriptome id Sobic.006G103500.1
Synonym
Functional annotation -
UniProt A0A1B6PLA4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G152600 - -
2 Sobic.005G042100 - -
3 Sobic.002G048501 - -
4 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.002G352301 - -
6 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
7 Sobic.006G073500 hypothetical protein SORBIDRAFT_06g016090(PubMedID : 26186930)@Photosystem I subunit O PSI-O (At)(PubMedID : 27208977)@membrane protein, putative, expressed K14332: photosystem I subunit PsaO
8 Sobic.005G087000 Chorophyll a/b binding protein CP26(PubMedID : 26186930)@Light harvesting complex PSII subunit 5 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B5(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08916: light-harvesting complex II chlorophyll a/b binding protein 5
9 Sobic.001G066600 mTERF domain containing protein, expressed -
10 Sobic.002G033900 Photosystem I reaction center subunit psaK(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed K02698: photosystem I subunit X
11 Sobic.009G243500 polygalacturonase, putative, expressed -
12 Sobic.006G011100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G082950 - -
14 Sobic.004G071800 - -
15 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -
16 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
17 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III
18 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
19 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
20 Sobic.003G052500 Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed K02699: photosystem I subunit XI


Gene co-expression network
sample Sobic006G103500 Sobic006G103500 Sobic005G152600 Sobic005G152600 Sobic006G103500--Sobic005G152600 Sobic005G042100 Sobic005G042100 Sobic006G103500--Sobic005G042100 Sobic002G048501 Sobic002G048501 Sobic006G103500--Sobic002G048501 Sobic001G274600 Sobic001G274600 Sobic006G103500--Sobic001G274600 Sobic002G352301 Sobic002G352301 Sobic006G103500--Sobic002G352301 Sobic009G229700 Sobic009G229700 Sobic006G103500--Sobic009G229700 Sobic006G073500 Sobic006G073500 Sobic006G103500--Sobic006G073500 Sobic005G087000 Sobic005G087000 Sobic006G103500--Sobic005G087000 Sobic001G066600 Sobic001G066600 Sobic006G103500--Sobic001G066600 Sobic005G152600--Sobic009G229700 Sobic005G152600--Sobic005G087000 Sobic005G152600--Sobic006G073500 Sobic009G165200 Sobic009G165200 Sobic005G152600--Sobic009G165200 Sobic002G033900 Sobic002G033900 Sobic005G152600--Sobic002G033900 Sobic001G046900 Sobic001G046900 Sobic005G152600--Sobic001G046900 Sobic003G055300 Sobic003G055300 Sobic005G152600--Sobic003G055300 Sobic005G152600--Sobic001G066600 Sobic005G152600--Sobic001G274600 Sobic005G042100--Sobic001G274600 Sobic002G082950 Sobic002G082950 Sobic005G042100--Sobic002G082950 Sobic010G108401 Sobic010G108401 Sobic005G042100--Sobic010G108401 Sobic008G038300 Sobic008G038300 Sobic005G042100--Sobic008G038300 Sobic010G183032 Sobic010G183032 Sobic005G042100--Sobic010G183032 Sobic004G071800 Sobic004G071800 Sobic005G042100--Sobic004G071800 Sobic005G042100--Sobic002G352301 Sobic005G042100--Sobic005G152600 Sobic009G243500 Sobic009G243500 Sobic005G042100--Sobic009G243500 Sobic004G071750 Sobic004G071750 Sobic002G048501--Sobic004G071750 Sobic005G204000 Sobic005G204000 Sobic002G048501--Sobic005G204000 Sobic001G160700 Sobic001G160700 Sobic002G048501--Sobic001G160700 Sobic001G274600--Sobic008G038300 Sobic001G274600--Sobic004G071800 Sobic003G209800 Sobic003G209800 Sobic001G274600--Sobic003G209800 Sobic006G011100 Sobic006G011100 Sobic001G274600--Sobic006G011100 Sobic003G052500 Sobic003G052500 Sobic001G274600--Sobic003G052500 Sobic001G274600--Sobic010G183032 Sobic002G000500 Sobic002G000500 Sobic001G274600--Sobic002G000500 Sobic001G274600--Sobic010G108401 Sobic001G274600--Sobic006G073500 Sobic002G352301--Sobic005G042100 Sobic002G201200 Sobic002G201200 Sobic002G352301--Sobic002G201200 Sobic002G352301--Sobic002G082950 Sobic002G352301--Sobic001G274600 Sobic002G352301--Sobic005G152600 Sobic002G352301--Sobic009G229700 Sobic002G102900 Sobic002G102900 Sobic002G352301--Sobic002G102900 Sobic002G352301--Sobic006G073500 Sobic002G352301--Sobic001G066600 Sobic009G229700--Sobic006G073500 Sobic009G229700--Sobic002G033900 Sobic009G229700--Sobic005G087000 Sobic009G229700--Sobic001G046900 Sobic001G070500 Sobic001G070500 Sobic009G229700--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic009G229700--Sobic010G189300 Sobic004G056900 Sobic004G056900 Sobic009G229700--Sobic004G056900 Sobic009G229700--Sobic005G152600 Sobic002G352100 Sobic002G352100 Sobic009G229700--Sobic002G352100 Sobic006G073500--Sobic002G033900 Sobic006G073500--Sobic009G229700 Sobic006G073500--Sobic005G087000 Sobic006G073500--Sobic001G070500 Sobic006G073500--Sobic001G046900 Sobic006G073500--Sobic004G056900 Sobic006G073500--Sobic010G189300 Sobic010G241000 Sobic010G241000 Sobic006G073500--Sobic010G241000 Sobic006G073500--Sobic003G052500 Sobic005G087000--Sobic006G073500 Sobic005G087000--Sobic009G229700 Sobic005G087000--Sobic001G046900 Sobic005G087000--Sobic002G033900 Sobic004G235200 Sobic004G235200 Sobic005G087000--Sobic004G235200 Sobic005G087000--Sobic010G241000 Sobic005G087000--Sobic002G352100 Sobic009G234600 Sobic009G234600 Sobic005G087000--Sobic009G234600 Sobic005G042000 Sobic005G042000 Sobic005G087000--Sobic005G042000 Sobic001G066600--Sobic009G229700 Sobic001G066600--Sobic009G165200 Sobic001G066600--Sobic010G189300 Sobic001G066600--Sobic002G033900 Sobic008G117300 Sobic008G117300 Sobic001G066600--Sobic008G117300 Sobic001G066600--Sobic005G152600 Sobic001G066600--Sobic001G070500 Sobic001G066600--Sobic006G073500 Sobic001G066600--Sobic002G352100
Octagon: transcription factors


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