Gene annotation
Transcriptome id Sobic.006G118900.2
Synonym Sb06g019990
Functional annotation OsFBO17 - F-box and other domain containing protein, expressed
UniProt A0A1Z5RE65
Pfam PF08238
Panther DB PTHR11102 PTHR11102:SF99
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70590 : F-box family protein
RAP-DB (Rice) LOC_Os04g40030.1 : OsFBO17 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040399 , Zm00025a056289
Brachypodium KQJ83143
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
2 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
3 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
5 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
6 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
7 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
8 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
10 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
11 Sobic.003G127300 expressed protein -
12 Sobic.002G113900 lipid binding protein, putative, expressed -
13 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
14 Sobic.001G364600 transmembrane protein 85, putative, expressed -
15 Sobic.003G261500 lipase, putative, expressed -
16 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
17 Sobic.004G348900 expressed protein -
18 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
19 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
20 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1


Gene co-expression network
sample Sobic006G118900 Sobic006G118900 Sobic006G054500 Sobic006G054500 Sobic006G118900--Sobic006G054500 Sobic009G004600 Sobic009G004600 Sobic006G118900--Sobic009G004600 Sobic002G400000 Sobic002G400000 Sobic006G118900--Sobic002G400000 Sobic003G405700 Sobic003G405700 Sobic006G118900--Sobic003G405700 Sobic001G051200 Sobic001G051200 Sobic006G118900--Sobic001G051200 Sobic004G074300 Sobic004G074300 Sobic006G118900--Sobic004G074300 Sobic007G168600 Sobic007G168600 Sobic006G118900--Sobic007G168600 Sobic002G092300 Sobic002G092300 Sobic006G118900--Sobic002G092300 Sobic003G077900 Sobic003G077900 Sobic006G118900--Sobic003G077900 Sobic007G079700 Sobic007G079700 Sobic006G054500--Sobic007G079700 Sobic006G054500--Sobic009G004600 Sobic004G060600 Sobic004G060600 Sobic006G054500--Sobic004G060600 Sobic004G301900 Sobic004G301900 Sobic006G054500--Sobic004G301900 Sobic002G113900 Sobic002G113900 Sobic006G054500--Sobic002G113900 Sobic006G054500--Sobic004G074300 Sobic001G364600 Sobic001G364600 Sobic006G054500--Sobic001G364600 Sobic002G273900 Sobic002G273900 Sobic006G054500--Sobic002G273900 Sobic010G090900 Sobic010G090900 Sobic006G054500--Sobic010G090900 Sobic009G004600--Sobic002G400000 Sobic004G356900 Sobic004G356900 Sobic009G004600--Sobic004G356900 Sobic003G217400 Sobic003G217400 Sobic009G004600--Sobic003G217400 Sobic009G198500 Sobic009G198500 Sobic009G004600--Sobic009G198500 Sobic001G263000 Sobic001G263000 Sobic009G004600--Sobic001G263000 Sobic001G314500 Sobic001G314500 Sobic009G004600--Sobic001G314500 Sobic009G004600--Sobic002G113900 Sobic010G205300 Sobic010G205300 Sobic009G004600--Sobic010G205300 Sobic009G004600--Sobic007G168600 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic001G080000 Sobic001G080000 Sobic003G405700--Sobic001G080000 Sobic006G183000 Sobic006G183000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic009G050700 Sobic009G050700 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic003G405700--Sobic002G272600 Sobic003G015900 Sobic003G015900 Sobic001G051200--Sobic003G015900 Sobic003G007500 Sobic003G007500 Sobic001G051200--Sobic003G007500 Sobic003G261400 Sobic003G261400 Sobic001G051200--Sobic003G261400 Sobic001G047400 Sobic001G047400 Sobic001G051200--Sobic001G047400 Sobic001G051200--Sobic010G000900 Sobic001G051200--Sobic007G168600 Sobic010G058500 Sobic010G058500 Sobic001G051200--Sobic010G058500 Sobic001G051200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic001G051200--Sobic010G168600 Sobic002G268400 Sobic002G268400 Sobic004G074300--Sobic002G268400 Sobic003G119400 Sobic003G119400 Sobic004G074300--Sobic003G119400 Sobic001G152000 Sobic001G152000 Sobic004G074300--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic004G074300--Sobic009G033900 Sobic004G074300--Sobic001G263000 Sobic002G259400 Sobic002G259400 Sobic004G074300--Sobic002G259400 Sobic010G057900 Sobic010G057900 Sobic004G074300--Sobic010G057900 Sobic004G077600 Sobic004G077600 Sobic004G074300--Sobic004G077600 Sobic004G074300--Sobic006G054500 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic001G502200 Sobic001G502200 Sobic007G168600--Sobic001G502200 Sobic007G168600--Sobic003G077900 Sobic007G168600--Sobic010G205300 Sobic003G124800 Sobic003G124800 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500 Sobic010G279700 Sobic010G279700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic007G115200 Sobic007G115200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic001G281600 Sobic001G281600 Sobic002G092300--Sobic001G281600 Sobic001G000200 Sobic001G000200 Sobic002G092300--Sobic001G000200 Sobic003G250500 Sobic003G250500 Sobic002G092300--Sobic003G250500 Sobic001G016000 Sobic001G016000 Sobic002G092300--Sobic001G016000 Sobic003G077900--Sobic002G400000 Sobic003G077900--Sobic007G168600 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic004G348900 Sobic004G348900 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic003G077900--Sobic004G130900
Octagon: transcription factors


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