Gene annotation
Transcriptome id Sobic.006G150900.1
Synonym
Functional annotation -
UniProt A0A1B6PM43
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G217500 receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -
4 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
5 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
6 Sobic.008G002400 expressed protein -
7 Sobic.005G002400 expressed protein -
8 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
9 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G120301 - -
11 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
12 Sobic.001G112900 expressed protein -
13 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
14 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
16 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G213400 expressed protein -
18 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.001G492600 VQ domain containing protein, putative, expressed -
20 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase


Gene co-expression network
sample Sobic006G150900 Sobic006G150900 Sobic006G154800 Sobic006G154800 Sobic006G150900--Sobic006G154800 Sobic004G217500 Sobic004G217500 Sobic006G150900--Sobic004G217500 Sobic003G080100 Sobic003G080100 Sobic006G150900--Sobic003G080100 Sobic003G326000 Sobic003G326000 Sobic006G150900--Sobic003G326000 Sobic010G113200 Sobic010G113200 Sobic006G150900--Sobic010G113200 Sobic008G002400 Sobic008G002400 Sobic006G150900--Sobic008G002400 Sobic005G002400 Sobic005G002400 Sobic006G150900--Sobic005G002400 Sobic004G190100 Sobic004G190100 Sobic006G150900--Sobic004G190100 Sobic003G440300 Sobic003G440300 Sobic006G150900--Sobic003G440300 Sobic006G154800--Sobic003G326000 Sobic010G271800 Sobic010G271800 Sobic006G154800--Sobic010G271800 Sobic006G154800--Sobic004G190100 Sobic006G154800--Sobic005G002400 Sobic006G154800--Sobic003G440300 Sobic006G154800--Sobic008G002400 Sobic001G112900 Sobic001G112900 Sobic006G154800--Sobic001G112900 Sobic006G154800--Sobic004G217500 Sobic006G154800--Sobic010G113200 Sobic004G217500--Sobic003G080100 Sobic004G217500--Sobic006G154800 Sobic005G065000 Sobic005G065000 Sobic004G217500--Sobic005G065000 Sobic004G217500--Sobic010G113200 Sobic010G104700 Sobic010G104700 Sobic004G217500--Sobic010G104700 Sobic004G047300 Sobic004G047300 Sobic004G217500--Sobic004G047300 Sobic004G153900 Sobic004G153900 Sobic004G217500--Sobic004G153900 Sobic003G012400 Sobic003G012400 Sobic004G217500--Sobic003G012400 Sobic006G120301 Sobic006G120301 Sobic004G217500--Sobic006G120301 Sobic003G080100--Sobic004G217500 Sobic001G492600 Sobic001G492600 Sobic003G080100--Sobic001G492600 Sobic003G080100--Sobic006G120301 Sobic002G351200 Sobic002G351200 Sobic003G080100--Sobic002G351200 Sobic003G080100--Sobic003G012400 Sobic002G132400 Sobic002G132400 Sobic003G080100--Sobic002G132400 Sobic002G213400 Sobic002G213400 Sobic003G080100--Sobic002G213400 Sobic003G080100--Sobic004G153900 Sobic004G271600 Sobic004G271600 Sobic003G080100--Sobic004G271600 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic004G214800 Sobic004G214800 Sobic003G326000--Sobic004G214800 Sobic003G326000--Sobic008G002400 Sobic001G181100 Sobic001G181100 Sobic003G326000--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic003G326000--Sobic002G052100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic003G326000--Sobic006G154800 Sobic010G113200--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic010G113200--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic010G113200--Sobic003G304300 Sobic009G246400 Sobic009G246400 Sobic010G113200--Sobic009G246400 Sobic010G113200--Sobic005G002400 Sobic002G161400 Sobic002G161400 Sobic010G113200--Sobic002G161400 Sobic010G113200--Sobic002G351200 Sobic004G344600 Sobic004G344600 Sobic010G113200--Sobic004G344600 Sobic003G162400 Sobic003G162400 Sobic010G113200--Sobic003G162400 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic006G020300 Sobic006G020300 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic008G002400--Sobic010G113200 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic005G002400--Sobic002G052100 Sobic005G002400--Sobic004G190100 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic003G154400 Sobic003G154400 Sobic005G002400--Sobic003G154400 Sobic004G190100--Sobic005G002400 Sobic004G190100--Sobic003G440300 Sobic004G190100--Sobic003G326000 Sobic004G190100--Sobic008G002400 Sobic004G190100--Sobic001G112900 Sobic004G190100--Sobic010G271800 Sobic010G223200 Sobic010G223200 Sobic004G190100--Sobic010G223200 Sobic004G190100--Sobic003G162400 Sobic004G190100--Sobic006G154800 Sobic003G440300--Sobic004G190100 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G188200 Sobic003G188200 Sobic003G440300--Sobic003G188200 Sobic002G291800 Sobic002G291800 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic003G440300--Sobic006G154800 Sobic004G323400 Sobic004G323400 Sobic003G440300--Sobic004G323400
Octagon: transcription factors


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