Gene annotation
Transcriptome id Sobic.006G159350.1
Synonym -
Functional annotation -
UniProt A0A1Z5RE40
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G034350 - -
2 Sobic.002G145600 expressed protein -
3 Sobic.004G313750 - -
4 Sobic.004G248000 expressed protein -
5 Sobic.001G377400 expressed protein -
6 Sobic.009G259300 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
7 Sobic.007G177901 - -
8 Sobic.008G134401 - -
9 Sobic.004G149150 - -
10 Sobic.004G259800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
11 Sobic.006G159500 serpin domain containing protein, putative, expressed K13963: serpin B
12 Sobic.009G134700 - -
13 Sobic.004G313000 leucine rich repeat containing protein, expressed -
14 Sobic.010G222300 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.004G171300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.003G267150 - -
19 Sobic.004G287000 rho-GTPase-activating protein-related, putative, expressed -
20 Sobic.005G162200 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase


Gene co-expression network
sample Sobic006G159350 Sobic006G159350 Sobic003G034350 Sobic003G034350 Sobic006G159350--Sobic003G034350 Sobic002G145600 Sobic002G145600 Sobic006G159350--Sobic002G145600 Sobic004G313750 Sobic004G313750 Sobic006G159350--Sobic004G313750 Sobic004G248000 Sobic004G248000 Sobic006G159350--Sobic004G248000 Sobic001G377400 Sobic001G377400 Sobic006G159350--Sobic001G377400 Sobic009G259300 Sobic009G259300 Sobic006G159350--Sobic009G259300 Sobic007G177901 Sobic007G177901 Sobic006G159350--Sobic007G177901 Sobic008G134401 Sobic008G134401 Sobic006G159350--Sobic008G134401 Sobic004G149150 Sobic004G149150 Sobic006G159350--Sobic004G149150 Sobic004G176550 Sobic004G176550 Sobic003G034350--Sobic004G176550 Sobic010G241400 Sobic010G241400 Sobic003G034350--Sobic010G241400 Sobic003G034350--Sobic004G313750 Sobic005G168900 Sobic005G168900 Sobic003G034350--Sobic005G168900 Sobic001G217850 Sobic001G217850 Sobic003G034350--Sobic001G217850 Sobic006G192900 Sobic006G192900 Sobic003G034350--Sobic006G192900 Sobic006G009200 Sobic006G009200 Sobic003G034350--Sobic006G009200 Sobic002G062400 Sobic002G062400 Sobic003G034350--Sobic002G062400 Sobic007G045750 Sobic007G045750 Sobic003G034350--Sobic007G045750 Sobic002G145600--Sobic004G313750 Sobic010G132100 Sobic010G132100 Sobic002G145600--Sobic010G132100 Sobic010G124133 Sobic010G124133 Sobic002G145600--Sobic010G124133 Sobic002G145600--Sobic001G377400 Sobic004G259800 Sobic004G259800 Sobic002G145600--Sobic004G259800 Sobic002G145600--Sobic003G034350 Sobic002G145600--Sobic004G248000 Sobic010G252800 Sobic010G252800 Sobic002G145600--Sobic010G252800 Sobic002G145600--Sobic007G177901 Sobic004G313750--Sobic003G034350 Sobic004G313750--Sobic004G176550 Sobic004G313750--Sobic002G145600 Sobic009G134700 Sobic009G134700 Sobic004G313750--Sobic009G134700 Sobic004G313750--Sobic004G248000 Sobic005G041150 Sobic005G041150 Sobic004G313750--Sobic005G041150 Sobic006G159500 Sobic006G159500 Sobic004G313750--Sobic006G159500 Sobic004G313750--Sobic010G124133 Sobic006G099400 Sobic006G099400 Sobic004G313750--Sobic006G099400 Sobic002G160500 Sobic002G160500 Sobic004G248000--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic004G248000--Sobic004G313000 Sobic003G267150 Sobic003G267150 Sobic004G248000--Sobic003G267150 Sobic004G262550 Sobic004G262550 Sobic004G248000--Sobic004G262550 Sobic002G319900 Sobic002G319900 Sobic004G248000--Sobic002G319900 Sobic001G377400--Sobic004G248000 Sobic001G377400--Sobic002G319900 Sobic001G377400--Sobic003G267150 Sobic001G377400--Sobic004G313000 Sobic001G377400--Sobic002G160500 Sobic003G440200 Sobic003G440200 Sobic009G259300--Sobic003G440200 Sobic009G259300--Sobic006G159350 Sobic006G060400 Sobic006G060400 Sobic009G259300--Sobic006G060400 Sobic009G259300--Sobic003G034350 Sobic009G259300--Sobic008G134401 Sobic001G042100 Sobic001G042100 Sobic009G259300--Sobic001G042100 Sobic001G334800 Sobic001G334800 Sobic009G259300--Sobic001G334800 Sobic004G091800 Sobic004G091800 Sobic009G259300--Sobic004G091800 Sobic008G174850 Sobic008G174850 Sobic009G259300--Sobic008G174850 Sobic007G177901--Sobic008G134401 Sobic007G177901--Sobic004G248000 Sobic007G177901--Sobic002G145600 Sobic007G177901--Sobic004G259800 Sobic007G177901--Sobic004G313750 Sobic007G177901--Sobic006G159500 Sobic001G237250 Sobic001G237250 Sobic007G177901--Sobic001G237250 Sobic005G044101 Sobic005G044101 Sobic007G177901--Sobic005G044101 Sobic007G177901--Sobic009G134700 Sobic008G134401--Sobic001G334800 Sobic004G171300 Sobic004G171300 Sobic008G134401--Sobic004G171300 Sobic008G134401--Sobic001G042100 Sobic005G165300 Sobic005G165300 Sobic008G134401--Sobic005G165300 Sobic005G216833 Sobic005G216833 Sobic008G134401--Sobic005G216833 Sobic008G134401--Sobic009G134700 Sobic002G018800 Sobic002G018800 Sobic008G134401--Sobic002G018800 Sobic008G134401--Sobic006G159500 Sobic008G134401--Sobic001G377400 Sobic004G149150--Sobic002G160500 Sobic004G149150--Sobic003G267150 Sobic004G149150--Sobic004G262550 Sobic009G091940 Sobic009G091940 Sobic004G149150--Sobic009G091940 Sobic003G389150 Sobic003G389150 Sobic004G149150--Sobic003G389150
Octagon: transcription factors


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