Gene annotation
Transcriptome id Sobic.006G187700.1
Synonym
Functional annotation -
UniProt A0A1B6PMR9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G068200 expressed protein -
2 Sobic.004G215400 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
3 Sobic.002G032100 - -
4 Sobic.002G027300 ZOS1-07 - C2H2 zinc finger protein, expressed -
5 Sobic.001G273200 transferase family protein, putative, expressed -
6 Sobic.001G472200 pumilio-family RNA binding repeat containing protein, expressed K17943: pumilio RNA-binding family
7 Sobic.006G185600 HOTHEAD precursor, putative, expressed K00108: betA, choline dehydrogenase
8 Sobic.005G180000 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
9 Sobic.004G283800 dehydration response related protein, putative, expressed -
10 Sobic.005G179800 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
11 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
13 Sobic.001G108100 expressed protein -
14 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
15 Sobic.009G099150 - -
16 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
17 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.010G014700 expressed protein -
19 Sobic.007G116800 BURP domain containing protein, expressed -
20 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G187700 Sobic006G187700 Sobic006G068200 Sobic006G068200 Sobic006G187700--Sobic006G068200 Sobic004G215400 Sobic004G215400 Sobic006G187700--Sobic004G215400 Sobic002G032100 Sobic002G032100 Sobic006G187700--Sobic002G032100 Sobic002G027300 Sobic002G027300 Sobic006G187700--Sobic002G027300 Sobic001G273200 Sobic001G273200 Sobic006G187700--Sobic001G273200 Sobic001G472200 Sobic001G472200 Sobic006G187700--Sobic001G472200 Sobic006G185600 Sobic006G185600 Sobic006G187700--Sobic006G185600 Sobic005G180000 Sobic005G180000 Sobic006G187700--Sobic005G180000 Sobic004G283800 Sobic004G283800 Sobic006G187700--Sobic004G283800 Sobic006G068200--Sobic004G215400 Sobic006G068200--Sobic001G273200 Sobic006G068200--Sobic005G180000 Sobic006G068200--Sobic002G032100 Sobic006G068200--Sobic002G027300 Sobic006G068200--Sobic006G185600 Sobic005G179800 Sobic005G179800 Sobic006G068200--Sobic005G179800 Sobic001G108100 Sobic001G108100 Sobic006G068200--Sobic001G108100 Sobic010G087600 Sobic010G087600 Sobic006G068200--Sobic010G087600 Sobic004G215400--Sobic006G068200 Sobic004G215400--Sobic010G087600 Sobic004G215400--Sobic005G180000 Sobic004G215400--Sobic006G185600 Sobic004G215400--Sobic001G273200 Sobic004G215400--Sobic005G179800 Sobic010G014700 Sobic010G014700 Sobic004G215400--Sobic010G014700 Sobic004G215400--Sobic001G108100 Sobic004G215400--Sobic002G032100 Sobic002G032100--Sobic002G027300 Sobic002G032100--Sobic006G068200 Sobic002G032100--Sobic004G215400 Sobic004G215500 Sobic004G215500 Sobic002G032100--Sobic004G215500 Sobic002G032100--Sobic005G180000 Sobic002G032100--Sobic001G273200 Sobic002G032100--Sobic005G179800 Sobic003G347100 Sobic003G347100 Sobic002G032100--Sobic003G347100 Sobic002G032100--Sobic006G185600 Sobic002G027300--Sobic002G027300 Sobic002G027300--Sobic006G068200 Sobic002G027300--Sobic004G215400 Sobic002G027300--Sobic004G215500 Sobic002G027300--Sobic005G180000 Sobic002G027300--Sobic001G273200 Sobic002G027300--Sobic005G179800 Sobic002G027300--Sobic003G347100 Sobic002G027300--Sobic006G185600 Sobic001G273200--Sobic005G180000 Sobic001G273200--Sobic005G179800 Sobic001G273200--Sobic006G185600 Sobic001G273200--Sobic006G068200 Sobic005G118700 Sobic005G118700 Sobic001G273200--Sobic005G118700 Sobic001G273200--Sobic004G215400 Sobic008G013400 Sobic008G013400 Sobic001G273200--Sobic008G013400 Sobic001G273200--Sobic002G032100 Sobic001G273200--Sobic002G027300 Sobic001G472200--Sobic008G013400 Sobic008G154900 Sobic008G154900 Sobic001G472200--Sobic008G154900 Sobic008G155900 Sobic008G155900 Sobic001G472200--Sobic008G155900 Sobic006G005800 Sobic006G005800 Sobic001G472200--Sobic006G005800 Sobic003G090650 Sobic003G090650 Sobic001G472200--Sobic003G090650 Sobic004G309700 Sobic004G309700 Sobic001G472200--Sobic004G309700 Sobic002G039900 Sobic002G039900 Sobic001G472200--Sobic002G039900 Sobic001G472200--Sobic004G215400 Sobic002G248300 Sobic002G248300 Sobic001G472200--Sobic002G248300 Sobic006G185600--Sobic005G179800 Sobic006G185600--Sobic005G180000 Sobic006G185600--Sobic005G118700 Sobic006G185600--Sobic001G273200 Sobic006G185600--Sobic008G013400 Sobic006G089700 Sobic006G089700 Sobic006G185600--Sobic006G089700 Sobic006G185600--Sobic004G215400 Sobic006G185600--Sobic006G068200 Sobic002G312200 Sobic002G312200 Sobic006G185600--Sobic002G312200 Sobic005G180000--Sobic005G179800 Sobic005G180000--Sobic006G185600 Sobic005G180000--Sobic001G273200 Sobic005G180000--Sobic005G118700 Sobic005G180000--Sobic004G215400 Sobic005G180000--Sobic006G068200 Sobic005G180000--Sobic008G013400 Sobic005G180000--Sobic006G089700 Sobic005G180000--Sobic003G347100 Sobic001G207600 Sobic001G207600 Sobic004G283800--Sobic001G207600 Sobic004G274600 Sobic004G274600 Sobic004G283800--Sobic004G274600 Sobic003G339600 Sobic003G339600 Sobic004G283800--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic004G283800--Sobic002G229700 Sobic003G070600 Sobic003G070600 Sobic004G283800--Sobic003G070600 Sobic010G020600 Sobic010G020600 Sobic004G283800--Sobic010G020600 Sobic009G235700 Sobic009G235700 Sobic004G283800--Sobic009G235700 Sobic004G357000 Sobic004G357000 Sobic004G283800--Sobic004G357000 Sobic003G113500 Sobic003G113500 Sobic004G283800--Sobic003G113500
Octagon: transcription factors


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