Gene annotation
Transcriptome id Sobic.007G030900.1,Sobic.007G030900.2
Synonym Sb07g002700
Functional annotation copine-6, putative, expressed
UniProt C5YMZ0 , Q8W0S8
Pfam PF13920 PF07002
Panther DB PTHR10857 PTHR10857:SF47
NCBI CDD KOG4172; Predicted E3 ubiquitin ligase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79380 : Ca(2)-dependent phospholipid-binding protein (Copine) family
RAP-DB (Rice) LOC_Os08g04130.1 : copine-6, putative, expressed
MaizeGDB (Corn) Zm00025a040404
Brachypodium PNT66593 , PNT66594 , KQJ94978
Barley -
Wheat TraesCS7A02G308900 , TraesCS7D02G305600 , TraesCS7B02G208900 , TraesCS7B02G208900
Populus -


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cDNA sequences
Sobic.007G030900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G053000 heavy metal-associated domain containing protein, expressed -
2 Sobic.005G073500 B3 DNA binding domain containing protein, expressed -
3 Sobic.003G235601 - -
4 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
5 Sobic.007G200200 lectin protein kinase family protein, putative, expressed -
6 Sobic.001G456650 - K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
7 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
8 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.010G055600 ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
10 Sobic.003G149500 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
11 Sobic.003G230300 expressed protein -
12 Sobic.009G004300 ECT protein, putative, expressed -
13 Sobic.010G253700 - -
14 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
15 Sobic.002G314950 - -
16 Sobic.002G263900 expressed protein -
17 Sobic.001G068901 - -
18 Sobic.006G069050 - -
19 Sobic.010G278300 OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed K01354: oligopeptidase B
20 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G030900 Sobic007G030900 Sobic006G053000 Sobic006G053000 Sobic007G030900--Sobic006G053000 Sobic005G073500 Sobic005G073500 Sobic007G030900--Sobic005G073500 Sobic003G235601 Sobic003G235601 Sobic007G030900--Sobic003G235601 Sobic002G271900 Sobic002G271900 Sobic007G030900--Sobic002G271900 Sobic007G200200 Sobic007G200200 Sobic007G030900--Sobic007G200200 Sobic001G456650 Sobic001G456650 Sobic007G030900--Sobic001G456650 Sobic006G229600 Sobic006G229600 Sobic007G030900--Sobic006G229600 Sobic001G061000 Sobic001G061000 Sobic007G030900--Sobic001G061000 Sobic010G055600 Sobic010G055600 Sobic007G030900--Sobic010G055600 Sobic006G053000--Sobic006G229600 Sobic006G053000--Sobic002G271900 Sobic003G230300 Sobic003G230300 Sobic006G053000--Sobic003G230300 Sobic010G155901 Sobic010G155901 Sobic006G053000--Sobic010G155901 Sobic006G058300 Sobic006G058300 Sobic006G053000--Sobic006G058300 Sobic003G400332 Sobic003G400332 Sobic006G053000--Sobic003G400332 Sobic006G069050 Sobic006G069050 Sobic006G053000--Sobic006G069050 Sobic003G149900 Sobic003G149900 Sobic006G053000--Sobic003G149900 Sobic006G110600 Sobic006G110600 Sobic006G053000--Sobic006G110600 Sobic005G073500--Sobic006G053000 Sobic005G073500--Sobic003G235601 Sobic001G362800 Sobic001G362800 Sobic005G073500--Sobic001G362800 Sobic005G073500--Sobic007G030900 Sobic005G073500--Sobic007G200200 Sobic005G073500--Sobic006G229600 Sobic005G073500--Sobic001G456650 Sobic006G005000 Sobic006G005000 Sobic005G073500--Sobic006G005000 Sobic005G073500--Sobic003G230300 Sobic003G235601--Sobic007G200200 Sobic003G235601--Sobic006G229600 Sobic010G253700 Sobic010G253700 Sobic003G235601--Sobic010G253700 Sobic001G197500 Sobic001G197500 Sobic003G235601--Sobic001G197500 Sobic010G242100 Sobic010G242100 Sobic003G235601--Sobic010G242100 Sobic003G235601--Sobic001G456650 Sobic001G068901 Sobic001G068901 Sobic003G235601--Sobic001G068901 Sobic004G012100 Sobic004G012100 Sobic003G235601--Sobic004G012100 Sobic003G235601--Sobic006G053000 Sobic002G271900--Sobic006G229600 Sobic009G004300 Sobic009G004300 Sobic002G271900--Sobic009G004300 Sobic002G326200 Sobic002G326200 Sobic002G271900--Sobic002G326200 Sobic002G133600 Sobic002G133600 Sobic002G271900--Sobic002G133600 Sobic002G271900--Sobic006G110600 Sobic002G271900--Sobic006G058300 Sobic002G271900--Sobic004G012100 Sobic002G271900--Sobic010G155901 Sobic009G258150 Sobic009G258150 Sobic002G271900--Sobic009G258150 Sobic007G200200--Sobic001G456650 Sobic007G200200--Sobic001G068901 Sobic007G200200--Sobic006G229600 Sobic007G200200--Sobic001G061000 Sobic007G200200--Sobic003G235601 Sobic009G072400 Sobic009G072400 Sobic007G200200--Sobic009G072400 Sobic002G314950 Sobic002G314950 Sobic007G200200--Sobic002G314950 Sobic006G232300 Sobic006G232300 Sobic007G200200--Sobic006G232300 Sobic007G200200--Sobic002G271900 Sobic001G456650--Sobic007G200200 Sobic007G165200 Sobic007G165200 Sobic001G456650--Sobic007G165200 Sobic001G361750 Sobic001G361750 Sobic001G456650--Sobic001G361750 Sobic001G456650--Sobic001G068901 Sobic006G093400 Sobic006G093400 Sobic001G456650--Sobic006G093400 Sobic001G456650--Sobic001G061000 Sobic001G033200 Sobic001G033200 Sobic001G456650--Sobic001G033200 Sobic001G456650--Sobic009G072400 Sobic001G456650--Sobic006G232300 Sobic006G229600--Sobic002G271900 Sobic006G229600--Sobic006G069050 Sobic006G229600--Sobic009G258150 Sobic006G229600--Sobic004G012100 Sobic004G152501 Sobic004G152501 Sobic006G229600--Sobic004G152501 Sobic006G229600--Sobic006G058300 Sobic003G126400 Sobic003G126400 Sobic006G229600--Sobic003G126400 Sobic006G229600--Sobic002G133600 Sobic010G257300 Sobic010G257300 Sobic006G229600--Sobic010G257300 Sobic002G118400 Sobic002G118400 Sobic001G061000--Sobic002G118400 Sobic004G045200 Sobic004G045200 Sobic001G061000--Sobic004G045200 Sobic001G061000--Sobic007G200200 Sobic001G061000--Sobic001G456650 Sobic001G061000--Sobic001G033200 Sobic001G061000--Sobic002G314950 Sobic001G061000--Sobic001G361750 Sobic002G320700 Sobic002G320700 Sobic001G061000--Sobic002G320700 Sobic001G061000--Sobic001G068901 Sobic010G132300 Sobic010G132300 Sobic010G055600--Sobic010G132300 Sobic004G160950 Sobic004G160950 Sobic010G055600--Sobic004G160950 Sobic007G174100 Sobic007G174100 Sobic010G055600--Sobic007G174100 Sobic001G212701 Sobic001G212701 Sobic010G055600--Sobic001G212701 Sobic001G309000 Sobic001G309000 Sobic010G055600--Sobic001G309000 Sobic003G279600 Sobic003G279600 Sobic010G055600--Sobic003G279600 Sobic010G055600--Sobic003G149900 Sobic010G055600--Sobic002G271900 Sobic010G055600--Sobic002G326200
Octagon: transcription factors


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