Gene annotation
Transcriptome id Sobic.007G047050.1
Synonym -
Functional annotation -
UniProt A0A1Z5R832
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G027100 ZOS1-07 - C2H2 zinc finger protein, expressed -
2 Sobic.009G125200 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
3 Sobic.001G538000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
4 Sobic.K020400 60S ribosomal protein L7, putative, expressed K02937: RP-L7e, large subunit ribosomal protein L7e
5 Sobic.004G101200 meiosis 5, putative, expressed -
6 Sobic.001G495500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.007G064100 - -
8 Sobic.009G219500 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
9 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.006G021500 response regulator receiver domain containing protein, expressed -
13 Sobic.005G151400 dnaJ domain containing protein, expressed -
14 Sobic.002G076600 rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed -
15 Sobic.006G178900 polygalacturonase, putative, expressed -
16 Sobic.002G096400 expressed protein -
17 Sobic.006G131100 - -
18 Sobic.003G040400 cytochrome P450, putative, expressed -
19 Sobic.006G227100 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
20 Sobic.007G106200 methyl-CpG binding domain containing protein, expressed -


Gene co-expression network
sample Sobic007G047050 Sobic007G047050 Sobic002G027100 Sobic002G027100 Sobic007G047050--Sobic002G027100 Sobic009G125200 Sobic009G125200 Sobic007G047050--Sobic009G125200 Sobic001G538000 Sobic001G538000 Sobic007G047050--Sobic001G538000 SobicK020400 SobicK020400 Sobic007G047050--SobicK020400 Sobic004G101200 Sobic004G101200 Sobic007G047050--Sobic004G101200 Sobic001G495500 Sobic001G495500 Sobic007G047050--Sobic001G495500 Sobic007G064100 Sobic007G064100 Sobic007G047050--Sobic007G064100 Sobic009G219500 Sobic009G219500 Sobic007G047050--Sobic009G219500 Sobic010G124600 Sobic010G124600 Sobic007G047050--Sobic010G124600 Sobic002G027100--Sobic007G047050 Sobic002G027100--Sobic009G125200 Sobic006G021500 Sobic006G021500 Sobic002G027100--Sobic006G021500 Sobic002G027100--SobicK020400 Sobic005G151400 Sobic005G151400 Sobic002G027100--Sobic005G151400 Sobic006G178900 Sobic006G178900 Sobic002G027100--Sobic006G178900 Sobic007G106200 Sobic007G106200 Sobic002G027100--Sobic007G106200 Sobic002G027100--Sobic001G495500 Sobic002G096400 Sobic002G096400 Sobic002G027100--Sobic002G096400 Sobic003G274000 Sobic003G274000 Sobic009G125200--Sobic003G274000 Sobic009G125200--Sobic002G027100 Sobic003G443900 Sobic003G443900 Sobic009G125200--Sobic003G443900 Sobic002G345500 Sobic002G345500 Sobic009G125200--Sobic002G345500 Sobic005G153300 Sobic005G153300 Sobic009G125200--Sobic005G153300 Sobic002G053201 Sobic002G053201 Sobic009G125200--Sobic002G053201 Sobic002G162200 Sobic002G162200 Sobic009G125200--Sobic002G162200 Sobic008G071200 Sobic008G071200 Sobic009G125200--Sobic008G071200 Sobic008G182200 Sobic008G182200 Sobic009G125200--Sobic008G182200 Sobic001G538000--Sobic010G124600 Sobic008G008200 Sobic008G008200 Sobic001G538000--Sobic008G008200 Sobic004G167000 Sobic004G167000 Sobic001G538000--Sobic004G167000 Sobic008G087300 Sobic008G087300 Sobic001G538000--Sobic008G087300 Sobic007G068700 Sobic007G068700 Sobic001G538000--Sobic007G068700 Sobic009G239800 Sobic009G239800 Sobic001G538000--Sobic009G239800 Sobic010G180000 Sobic010G180000 Sobic001G538000--Sobic010G180000 Sobic010G005900 Sobic010G005900 Sobic001G538000--Sobic010G005900 Sobic001G303750 Sobic001G303750 Sobic001G538000--Sobic001G303750 SobicK020400--Sobic002G027100 SobicK020400--Sobic007G047050 SobicK020400--Sobic006G021500 SobicK020400--Sobic001G495500 Sobic003G015950 Sobic003G015950 SobicK020400--Sobic003G015950 SobicK020400--Sobic009G125200 SobicK020400--Sobic005G151400 Sobic010G029500 Sobic010G029500 SobicK020400--Sobic010G029500 SobicK020400--Sobic006G178900 Sobic004G101200--Sobic009G219500 Sobic006G111100 Sobic006G111100 Sobic004G101200--Sobic006G111100 Sobic001G137800 Sobic001G137800 Sobic004G101200--Sobic001G137800 Sobic001G235200 Sobic001G235200 Sobic004G101200--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic004G101200--Sobic006G213900 Sobic003G374100 Sobic003G374100 Sobic004G101200--Sobic003G374100 Sobic002G076600 Sobic002G076600 Sobic004G101200--Sobic002G076600 Sobic001G235100 Sobic001G235100 Sobic004G101200--Sobic001G235100 Sobic003G129200 Sobic003G129200 Sobic004G101200--Sobic003G129200 Sobic010G156100 Sobic010G156100 Sobic001G495500--Sobic010G156100 Sobic001G495500--Sobic003G274000 Sobic006G227100 Sobic006G227100 Sobic001G495500--Sobic006G227100 Sobic001G495500--Sobic009G125200 Sobic001G495500--Sobic005G151400 Sobic001G495500--Sobic002G027100 Sobic001G495500--Sobic006G111100 Sobic006G131100 Sobic006G131100 Sobic001G495500--Sobic006G131100 Sobic005G179700 Sobic005G179700 Sobic001G495500--Sobic005G179700 Sobic007G064100--Sobic006G111100 Sobic007G064100--Sobic004G101200 Sobic007G064100--Sobic003G274000 Sobic007G064100--Sobic001G235100 Sobic002G121900 Sobic002G121900 Sobic007G064100--Sobic002G121900 Sobic007G064100--Sobic003G374100 Sobic006G028800 Sobic006G028800 Sobic007G064100--Sobic006G028800 Sobic007G064100--Sobic010G156100 Sobic007G064100--Sobic001G495500 Sobic003G088600 Sobic003G088600 Sobic009G219500--Sobic003G088600 Sobic006G271600 Sobic006G271600 Sobic009G219500--Sobic006G271600 Sobic009G219500--Sobic004G101200 Sobic010G194600 Sobic010G194600 Sobic009G219500--Sobic010G194600 Sobic009G219500--Sobic001G137800 Sobic009G219500--Sobic003G129200 Sobic001G086400 Sobic001G086400 Sobic009G219500--Sobic001G086400 Sobic008G137700 Sobic008G137700 Sobic009G219500--Sobic008G137700 Sobic003G117200 Sobic003G117200 Sobic009G219500--Sobic003G117200 Sobic010G124600--Sobic004G167000 Sobic010G124600--Sobic008G087300 Sobic001G266900 Sobic001G266900 Sobic010G124600--Sobic001G266900 Sobic010G124600--Sobic008G008200 Sobic003G040400 Sobic003G040400 Sobic010G124600--Sobic003G040400 Sobic010G124600--Sobic010G180000 Sobic010G124600--Sobic009G239800 Sobic008G138300 Sobic008G138300 Sobic010G124600--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic010G124600--Sobic010G159500
Octagon: transcription factors


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