Gene annotation
Transcriptome id Sobic.007G052600.1
Synonym Sb07g004250
Functional annotation expressed protein
UniProt C5YHF3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g06540.1 : expressed protein
MaizeGDB (Corn) Zm00025a030048
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G061000 expressed protein -
2 Sobic.010G155500 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.008G178901 - -
4 Sobic.006G197000 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.009G206800 WRKY23, expressed -
6 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
7 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
8 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
9 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
10 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
11 Sobic.002G005300 dirigent, putative, expressed -
12 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.010G014200 expressed protein -
14 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.010G224800 patellin-5, putative, expressed -
16 Sobic.010G114400 expressed protein -
17 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
19 Sobic.003G368150 - -
20 Sobic.002G041533 - -


Gene co-expression network
sample Sobic007G052600 Sobic007G052600 Sobic008G061000 Sobic008G061000 Sobic007G052600--Sobic008G061000 Sobic010G155500 Sobic010G155500 Sobic007G052600--Sobic010G155500 Sobic008G178901 Sobic008G178901 Sobic007G052600--Sobic008G178901 Sobic006G197000 Sobic006G197000 Sobic007G052600--Sobic006G197000 Sobic009G206800 Sobic009G206800 Sobic007G052600--Sobic009G206800 Sobic004G128600 Sobic004G128600 Sobic007G052600--Sobic004G128600 Sobic004G329100 Sobic004G329100 Sobic007G052600--Sobic004G329100 Sobic001G193400 Sobic001G193400 Sobic007G052600--Sobic001G193400 Sobic001G200500 Sobic001G200500 Sobic007G052600--Sobic001G200500 Sobic008G061000--Sobic001G200500 Sobic008G061000--Sobic004G329100 Sobic008G061000--Sobic004G128600 Sobic008G061000--Sobic006G197000 Sobic008G133100 Sobic008G133100 Sobic008G061000--Sobic008G133100 Sobic001G541900 Sobic001G541900 Sobic008G061000--Sobic001G541900 Sobic008G061000--Sobic001G193400 Sobic007G001300 Sobic007G001300 Sobic008G061000--Sobic007G001300 Sobic003G350100 Sobic003G350100 Sobic008G061000--Sobic003G350100 Sobic010G155500--Sobic008G178901 Sobic010G155500--Sobic007G052600 Sobic003G101600 Sobic003G101600 Sobic010G155500--Sobic003G101600 Sobic008G015000 Sobic008G015000 Sobic010G155500--Sobic008G015000 Sobic006G094400 Sobic006G094400 Sobic010G155500--Sobic006G094400 Sobic009G094000 Sobic009G094000 Sobic010G155500--Sobic009G094000 Sobic008G164525 Sobic008G164525 Sobic010G155500--Sobic008G164525 Sobic003G217000 Sobic003G217000 Sobic010G155500--Sobic003G217000 Sobic001G434450 Sobic001G434450 Sobic010G155500--Sobic001G434450 Sobic008G178901--Sobic010G155500 Sobic008G178901--Sobic007G052600 Sobic002G005300 Sobic002G005300 Sobic008G178901--Sobic002G005300 Sobic008G178901--Sobic009G206800 Sobic008G178901--Sobic004G329100 Sobic008G178901--Sobic008G061000 Sobic010G014200 Sobic010G014200 Sobic008G178901--Sobic010G014200 Sobic001G008400 Sobic001G008400 Sobic008G178901--Sobic001G008400 Sobic008G178901--Sobic006G197000 Sobic006G197000--Sobic004G128600 Sobic003G201400 Sobic003G201400 Sobic006G197000--Sobic003G201400 Sobic010G224800 Sobic010G224800 Sobic006G197000--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic006G197000--Sobic010G114400 Sobic006G197000--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic006G197000--Sobic002G156300 Sobic009G031100 Sobic009G031100 Sobic006G197000--Sobic009G031100 Sobic003G109400 Sobic003G109400 Sobic006G197000--Sobic003G109400 Sobic006G197000--Sobic001G200500 Sobic009G206800--Sobic007G052600 Sobic006G009900 Sobic006G009900 Sobic009G206800--Sobic006G009900 Sobic009G206800--Sobic002G005300 Sobic009G206800--Sobic008G178901 Sobic009G206800--Sobic006G197000 Sobic009G206800--Sobic008G061000 Sobic009G206800--Sobic001G008400 Sobic010G161300 Sobic010G161300 Sobic009G206800--Sobic010G161300 Sobic009G123000 Sobic009G123000 Sobic009G206800--Sobic009G123000 Sobic004G128600--Sobic006G197000 Sobic002G425900 Sobic002G425900 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic009G154000 Sobic009G154000 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic004G128600--Sobic003G201400 Sobic004G128600--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G128600--Sobic005G102100 Sobic004G329100--Sobic001G541900 Sobic004G197300 Sobic004G197300 Sobic004G329100--Sobic004G197300 Sobic004G329100--Sobic007G001300 Sobic004G329100--Sobic010G224800 Sobic003G368150 Sobic003G368150 Sobic004G329100--Sobic003G368150 Sobic001G255700 Sobic001G255700 Sobic004G329100--Sobic001G255700 Sobic004G329100--Sobic010G114400 Sobic009G163500 Sobic009G163500 Sobic004G329100--Sobic009G163500 Sobic010G179150 Sobic010G179150 Sobic004G329100--Sobic010G179150 Sobic001G193400--Sobic003G350100 Sobic003G067300 Sobic003G067300 Sobic001G193400--Sobic003G067300 Sobic004G265400 Sobic004G265400 Sobic001G193400--Sobic004G265400 Sobic007G149600 Sobic007G149600 Sobic001G193400--Sobic007G149600 Sobic003G200501 Sobic003G200501 Sobic001G193400--Sobic003G200501 Sobic003G067500 Sobic003G067500 Sobic001G193400--Sobic003G067500 Sobic002G210200 Sobic002G210200 Sobic001G193400--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200 Sobic001G200500--Sobic008G133100 Sobic001G200500--Sobic010G224800 Sobic001G200500--Sobic007G001300 Sobic001G200500--Sobic009G031100 Sobic001G200500--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic001G200500--Sobic002G284800 Sobic001G200500--Sobic003G109400 Sobic001G200500--Sobic002G156300 Sobic001G200500--Sobic003G368150
Octagon: transcription factors


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