Gene annotation
Transcriptome id Sobic.007G071600.1
Synonym Sb07g005670
Functional annotation acyl-desaturase, chloroplast precursor, putative, expressed
UniProt A0A1B6PG81
Pfam PF03405
Panther DB PTHR31155 PTHR31155:SF10
NCBI CDD -
KEGG Orthology K03921; FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
Gene Ontology GO:0006631; fatty acid metabolic process


Orthologs (automatic annotation)
TAIR AT3G02610 : Plant stearoyl-acyl-carrier-protein desaturase family protein
RAP-DB (Rice) LOC_Os08g10010.1 : acyl-desaturase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003595 , Zm00025a054837 , Zm00025a003802
Brachypodium KQJ95532 , KQK10887
Barley HORVU2Hr1G012600.1 , HORVU2Hr1G012600.2 , HORVU7Hr1G040140.1 , HORVU7Hr1G040140.2 , HORVU7Hr1G040140.3 , HORVU2Hr1G012780.1 , HORVU2Hr1G006990.1 , HORVU3Hr1G091320.2 , HORVU3Hr1G091320.3 , HORVU3Hr1G091320.1
Wheat TraesCS2B02G090700 , TraesCS2B02G090700 , TraesCS2B02G090400 , TraesCS3A02G408700 , TraesCS7B02G102300 , TraesCS2A02G075300 , TraesCS7A02G196500 , TraesCS2D02G074200 , TraesCS2A02G075400 , TraesCS2D02G074000 , TraesCS2D02G074100 , TraesCS2A02G075500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G084900 - -
2 Sobic.006G155600 CRP1 - Cysteine-rich family protein precursor, expressed -
3 Sobic.005G035100 NB-ARC domain containing protein, expressed -
4 Sobic.007G193500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659910)@OsSPL16 - SBP-box gene family member, expressed -
5 Sobic.001G121400 - -
6 Sobic.003G212800 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
7 Sobic.006G006600 - -
8 Sobic.003G006600 aquaporin protein, putative, expressed K09873: aquaporin TIP
9 Sobic.002G025400 expressed protein -
10 Sobic.001G042600 expressed protein -
11 Sobic.010G133300 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
12 Sobic.004G346500 heavy metal-associated domain containing protein, expressed -
13 Sobic.006G069400 expressed protein -
14 Sobic.010G065700 expressed protein -
15 Sobic.008G045232 - -
16 Sobic.008G014900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
17 Sobic.008G038700 DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
18 Sobic.010G048700 expressed protein -
19 Sobic.006G219100 expressed protein -
20 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic007G071600 Sobic007G071600 Sobic006G084900 Sobic006G084900 Sobic007G071600--Sobic006G084900 Sobic006G155600 Sobic006G155600 Sobic007G071600--Sobic006G155600 Sobic005G035100 Sobic005G035100 Sobic007G071600--Sobic005G035100 Sobic007G193500 Sobic007G193500 Sobic007G071600--Sobic007G193500 Sobic001G121400 Sobic001G121400 Sobic007G071600--Sobic001G121400 Sobic003G212800 Sobic003G212800 Sobic007G071600--Sobic003G212800 Sobic006G006600 Sobic006G006600 Sobic007G071600--Sobic006G006600 Sobic003G006600 Sobic003G006600 Sobic007G071600--Sobic003G006600 Sobic002G025400 Sobic002G025400 Sobic007G071600--Sobic002G025400 Sobic006G084900--Sobic007G193500 Sobic006G084900--Sobic006G155600 Sobic006G084900--Sobic001G121400 Sobic008G045232 Sobic008G045232 Sobic006G084900--Sobic008G045232 Sobic006G084900--Sobic007G071600 Sobic001G152500 Sobic001G152500 Sobic006G084900--Sobic001G152500 Sobic010G133300 Sobic010G133300 Sobic006G084900--Sobic010G133300 Sobic002G289701 Sobic002G289701 Sobic006G084900--Sobic002G289701 Sobic005G085800 Sobic005G085800 Sobic006G084900--Sobic005G085800 Sobic001G366000 Sobic001G366000 Sobic006G155600--Sobic001G366000 Sobic006G155600--Sobic003G006600 Sobic006G117900 Sobic006G117900 Sobic006G155600--Sobic006G117900 Sobic002G179200 Sobic002G179200 Sobic006G155600--Sobic002G179200 Sobic002G165500 Sobic002G165500 Sobic006G155600--Sobic002G165500 Sobic006G155600--Sobic006G006600 Sobic004G346500 Sobic004G346500 Sobic006G155600--Sobic004G346500 Sobic004G227900 Sobic004G227900 Sobic006G155600--Sobic004G227900 Sobic005G010600 Sobic005G010600 Sobic006G155600--Sobic005G010600 Sobic003G060900 Sobic003G060900 Sobic005G035100--Sobic003G060900 Sobic007G095850 Sobic007G095850 Sobic005G035100--Sobic007G095850 Sobic003G141400 Sobic003G141400 Sobic005G035100--Sobic003G141400 Sobic007G215300 Sobic007G215300 Sobic005G035100--Sobic007G215300 Sobic001G213150 Sobic001G213150 Sobic005G035100--Sobic001G213150 Sobic002G407500 Sobic002G407500 Sobic005G035100--Sobic002G407500 Sobic005G050900 Sobic005G050900 Sobic005G035100--Sobic005G050900 Sobic009G029800 Sobic009G029800 Sobic005G035100--Sobic009G029800 Sobic008G053000 Sobic008G053000 Sobic005G035100--Sobic008G053000 Sobic007G193500--Sobic008G045232 Sobic007G193500--Sobic005G085800 Sobic007G193500--Sobic002G289701 Sobic007G193500--Sobic008G053000 Sobic005G030200 Sobic005G030200 Sobic007G193500--Sobic005G030200 Sobic007G193500--Sobic001G152500 Sobic001G189800 Sobic001G189800 Sobic007G193500--Sobic001G189800 Sobic007G007650 Sobic007G007650 Sobic007G193500--Sobic007G007650 Sobic001G482500 Sobic001G482500 Sobic007G193500--Sobic001G482500 Sobic001G121400--Sobic004G346500 Sobic006G184000 Sobic006G184000 Sobic001G121400--Sobic006G184000 Sobic010G050500 Sobic010G050500 Sobic001G121400--Sobic010G050500 Sobic001G121400--Sobic006G155600 Sobic001G121400--Sobic006G084900 Sobic009G172000 Sobic009G172000 Sobic001G121400--Sobic009G172000 Sobic001G121400--Sobic010G133300 Sobic001G185000 Sobic001G185000 Sobic001G121400--Sobic001G185000 Sobic009G153900 Sobic009G153900 Sobic001G121400--Sobic009G153900 Sobic006G069400 Sobic006G069400 Sobic003G212800--Sobic006G069400 Sobic003G212800--Sobic007G193500 Sobic009G133100 Sobic009G133100 Sobic003G212800--Sobic009G133100 Sobic003G212800--Sobic005G085800 Sobic002G384800 Sobic002G384800 Sobic003G212800--Sobic002G384800 Sobic004G290400 Sobic004G290400 Sobic003G212800--Sobic004G290400 Sobic003G212800--Sobic001G482500 Sobic003G212800--Sobic008G045232 Sobic002G267300 Sobic002G267300 Sobic003G212800--Sobic002G267300 Sobic006G006600--Sobic006G155600 Sobic006G006600--Sobic002G025400 Sobic006G006600--Sobic001G366000 Sobic006G006600--Sobic003G006600 Sobic006G006600--Sobic002G179200 Sobic006G006600--Sobic006G117900 Sobic006G187300 Sobic006G187300 Sobic006G006600--Sobic006G187300 Sobic006G006600--Sobic002G165500 Sobic006G006600--Sobic005G010600 Sobic003G006600--Sobic002G179200 Sobic008G013500 Sobic008G013500 Sobic003G006600--Sobic008G013500 Sobic001G472301 Sobic001G472301 Sobic003G006600--Sobic001G472301 Sobic003G006600--Sobic006G117900 Sobic003G006600--Sobic001G366000 Sobic001G511600 Sobic001G511600 Sobic003G006600--Sobic001G511600 Sobic007G153100 Sobic007G153100 Sobic003G006600--Sobic007G153100 Sobic005G090000 Sobic005G090000 Sobic003G006600--Sobic005G090000 Sobic003G011700 Sobic003G011700 Sobic003G006600--Sobic003G011700 Sobic004G062100 Sobic004G062100 Sobic002G025400--Sobic004G062100 Sobic002G025400--Sobic004G227900 Sobic001G152400 Sobic001G152400 Sobic002G025400--Sobic001G152400 Sobic002G025400--Sobic001G366000 Sobic008G004200 Sobic008G004200 Sobic002G025400--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic002G025400--Sobic009G254500 Sobic010G215700 Sobic010G215700 Sobic002G025400--Sobic010G215700 Sobic001G438500 Sobic001G438500 Sobic002G025400--Sobic001G438500 Sobic006G160800 Sobic006G160800 Sobic002G025400--Sobic006G160800
Octagon: transcription factors


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