Gene annotation
Transcriptome id Sobic.007G076500.1
Synonym Sb07g006140
Functional annotation exonuclease, putative, expressed
UniProt C5YIV1
Pfam PF00929
Panther DB PTHR23044 PTHR23044:SF34
NCBI CDD KOG0542; Predicted exonuclease
KEGG Orthology K18417; ERI1 exoribonuclease 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15140 : Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RAP-DB (Rice) LOC_Os01g43080.1 : exonuclease, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK16243
Barley HORVU3Hr1G033430.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067000 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
2 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.002G161600 B3 DNA binding domain containing protein, expressed -
4 Sobic.005G098700 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
6 Sobic.003G232332 - -
7 Sobic.007G199500 MBTB30 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.003G026900 expressed protein -
9 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.004G038900 expressed protein -
11 Sobic.006G070830 - K01193: INV, beta-fructofuranosidase
12 Sobic.002G286800 MATE efflux protein, putative, expressed -
13 Sobic.002G420800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stress responsive protein, putative, expressed -
14 Sobic.007G208200 expressed protein -
15 Sobic.010G207400 protein kinase domain containing protein, expressed -
16 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
17 Sobic.010G084800 - -
18 Sobic.001G371600 - -
19 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
20 Sobic.010G133150 - -


Gene co-expression network
sample Sobic007G076500 Sobic007G076500 Sobic001G067000 Sobic001G067000 Sobic007G076500--Sobic001G067000 Sobic004G196800 Sobic004G196800 Sobic007G076500--Sobic004G196800 Sobic002G161600 Sobic002G161600 Sobic007G076500--Sobic002G161600 Sobic005G098700 Sobic005G098700 Sobic007G076500--Sobic005G098700 Sobic007G150700 Sobic007G150700 Sobic007G076500--Sobic007G150700 Sobic003G232332 Sobic003G232332 Sobic007G076500--Sobic003G232332 Sobic007G199500 Sobic007G199500 Sobic007G076500--Sobic007G199500 Sobic003G026900 Sobic003G026900 Sobic007G076500--Sobic003G026900 Sobic010G047300 Sobic010G047300 Sobic007G076500--Sobic010G047300 Sobic001G067000--Sobic003G026900 Sobic006G143300 Sobic006G143300 Sobic001G067000--Sobic006G143300 Sobic002G420800 Sobic002G420800 Sobic001G067000--Sobic002G420800 Sobic002G230400 Sobic002G230400 Sobic001G067000--Sobic002G230400 Sobic001G067000--Sobic007G076500 Sobic002G147466 Sobic002G147466 Sobic001G067000--Sobic002G147466 Sobic001G067000--Sobic004G196800 Sobic001G067000--Sobic007G199500 Sobic010G193700 Sobic010G193700 Sobic001G067000--Sobic010G193700 Sobic009G025100 Sobic009G025100 Sobic004G196800--Sobic009G025100 Sobic004G210000 Sobic004G210000 Sobic004G196800--Sobic004G210000 Sobic006G015800 Sobic006G015800 Sobic004G196800--Sobic006G015800 Sobic010G207400 Sobic010G207400 Sobic004G196800--Sobic010G207400 Sobic004G196800--Sobic010G047300 Sobic005G077900 Sobic005G077900 Sobic004G196800--Sobic005G077900 Sobic002G293100 Sobic002G293100 Sobic004G196800--Sobic002G293100 Sobic004G038900 Sobic004G038900 Sobic004G196800--Sobic004G038900 Sobic009G033500 Sobic009G033500 Sobic004G196800--Sobic009G033500 Sobic009G058300 Sobic009G058300 Sobic002G161600--Sobic009G058300 Sobic002G161600--Sobic010G047300 Sobic002G015400 Sobic002G015400 Sobic002G161600--Sobic002G015400 Sobic007G032500 Sobic007G032500 Sobic002G161600--Sobic007G032500 Sobic002G108300 Sobic002G108300 Sobic002G161600--Sobic002G108300 Sobic001G511400 Sobic001G511400 Sobic002G161600--Sobic001G511400 Sobic002G172100 Sobic002G172100 Sobic002G161600--Sobic002G172100 Sobic002G015500 Sobic002G015500 Sobic002G161600--Sobic002G015500 Sobic005G174200 Sobic005G174200 Sobic002G161600--Sobic005G174200 Sobic005G098700--Sobic002G161600 Sobic006G264800 Sobic006G264800 Sobic005G098700--Sobic006G264800 Sobic010G031400 Sobic010G031400 Sobic005G098700--Sobic010G031400 Sobic005G098700--Sobic002G172100 Sobic001G261700 Sobic001G261700 Sobic005G098700--Sobic001G261700 Sobic009G057100 Sobic009G057100 Sobic005G098700--Sobic009G057100 Sobic005G147500 Sobic005G147500 Sobic005G098700--Sobic005G147500 Sobic003G294800 Sobic003G294800 Sobic005G098700--Sobic003G294800 Sobic005G098700--Sobic009G058300 Sobic001G442200 Sobic001G442200 Sobic007G150700--Sobic001G442200 Sobic007G150700--Sobic004G196800 Sobic005G171800 Sobic005G171800 Sobic007G150700--Sobic005G171800 Sobic004G212350 Sobic004G212350 Sobic007G150700--Sobic004G212350 Sobic005G032500 Sobic005G032500 Sobic007G150700--Sobic005G032500 Sobic010G060100 Sobic010G060100 Sobic007G150700--Sobic010G060100 Sobic002G100000 Sobic002G100000 Sobic007G150700--Sobic002G100000 Sobic001G425900 Sobic001G425900 Sobic007G150700--Sobic001G425900 Sobic010G084800 Sobic010G084800 Sobic007G150700--Sobic010G084800 Sobic005G176875 Sobic005G176875 Sobic003G232332--Sobic005G176875 Sobic007G066200 Sobic007G066200 Sobic003G232332--Sobic007G066200 Sobic001G269650 Sobic001G269650 Sobic003G232332--Sobic001G269650 Sobic003G232332--Sobic002G161600 Sobic005G033600 Sobic005G033600 Sobic003G232332--Sobic005G033600 Sobic005G226800 Sobic005G226800 Sobic003G232332--Sobic005G226800 Sobic003G211600 Sobic003G211600 Sobic003G232332--Sobic003G211600 Sobic003G232332--Sobic002G015500 Sobic003G232332--Sobic010G084800 Sobic002G097100 Sobic002G097100 Sobic007G199500--Sobic002G097100 Sobic003G319050 Sobic003G319050 Sobic007G199500--Sobic003G319050 Sobic001G297700 Sobic001G297700 Sobic007G199500--Sobic001G297700 Sobic007G199500--Sobic002G015500 Sobic002G300900 Sobic002G300900 Sobic007G199500--Sobic002G300900 Sobic001G495700 Sobic001G495700 Sobic007G199500--Sobic001G495700 Sobic004G071100 Sobic004G071100 Sobic007G199500--Sobic004G071100 Sobic007G199500--Sobic009G057100 Sobic002G007300 Sobic002G007300 Sobic007G199500--Sobic002G007300 Sobic004G075700 Sobic004G075700 Sobic003G026900--Sobic004G075700 Sobic005G131800 Sobic005G131800 Sobic003G026900--Sobic005G131800 Sobic009G132650 Sobic009G132650 Sobic003G026900--Sobic009G132650 Sobic003G026900--Sobic001G067000 Sobic006G186300 Sobic006G186300 Sobic003G026900--Sobic006G186300 Sobic006G061100 Sobic006G061100 Sobic003G026900--Sobic006G061100 Sobic003G026900--Sobic002G230400 Sobic006G161300 Sobic006G161300 Sobic003G026900--Sobic006G161300 Sobic003G026900--Sobic005G176875 Sobic010G047300--Sobic009G058300 Sobic010G047300--Sobic006G264800 Sobic010G047300--Sobic002G172100 Sobic001G489075 Sobic001G489075 Sobic010G047300--Sobic001G489075 Sobic008G109600 Sobic008G109600 Sobic010G047300--Sobic008G109600 Sobic010G047300--Sobic002G108300 Sobic002G172200 Sobic002G172200 Sobic010G047300--Sobic002G172200 Sobic001G284700 Sobic001G284700 Sobic010G047300--Sobic001G284700 Sobic010G047300--Sobic002G015400
Octagon: transcription factors


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