Gene annotation
Transcriptome id Sobic.007G104600.1,Sobic.007G104600.2
Synonym Sb07g014620,
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
dnaJ domain containing protein, expressed
UniProt A0A1Z5R941 , C5YK63
Pfam PF00226 PF01556
Panther DB PTHR24078 PTHR24078:SF218
NCBI CDD KOG0714; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09510; DnaJ homolog subfamily B member 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25530 : DNAJ heat shock family protein
RAP-DB (Rice) LOC_Os08g28700.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036596 , Zm00025a006149
Brachypodium KQJ98154 , KQK04897
Barley HORVU3Hr1G113710.4 , HORVU3Hr1G113710.2 , HORVU3Hr1G113710.3 , HORVU3Hr1G113710.1
Wheat TraesCSU02G059600 , TraesCS3A02G520100 , TraesCS3B02G587800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G015600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.010G270200 rhodanese-like domain containing protein, putative, expressed -
3 Sobic.004G051500 OsMADS80 - MADS-box family gene with M-alpha type-box, expressed -
4 Sobic.006G132600 - -
5 Sobic.001G434650 - -
6 Sobic.006G077700 - -
7 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
8 Sobic.002G381800 - -
9 Sobic.004G198800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@expressed protein K01113: alkaline phosphatase D
10 Sobic.005G160801 - -
11 Sobic.003G302600 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
12 Sobic.009G203500 hexokinase, putative, expressed K00844: hexokinase
13 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9
14 Sobic.001G005400 - -
15 Sobic.003G306500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
16 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
17 Sobic.010G082300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.009G241000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@3 Ketoacyl CoA synthetase 11 KCS11 (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.001G122766 - -
20 Sobic.003G211000 - -


Gene co-expression network
sample Sobic007G104600 Sobic007G104600 Sobic008G015600 Sobic008G015600 Sobic007G104600--Sobic008G015600 Sobic010G270200 Sobic010G270200 Sobic007G104600--Sobic010G270200 Sobic004G051500 Sobic004G051500 Sobic007G104600--Sobic004G051500 Sobic006G132600 Sobic006G132600 Sobic007G104600--Sobic006G132600 Sobic001G434650 Sobic001G434650 Sobic007G104600--Sobic001G434650 Sobic006G077700 Sobic006G077700 Sobic007G104600--Sobic006G077700 Sobic006G166400 Sobic006G166400 Sobic007G104600--Sobic006G166400 Sobic002G381800 Sobic002G381800 Sobic007G104600--Sobic002G381800 Sobic004G198800 Sobic004G198800 Sobic007G104600--Sobic004G198800 Sobic008G015600--Sobic007G104600 Sobic002G265300 Sobic002G265300 Sobic008G015600--Sobic002G265300 Sobic010G182500 Sobic010G182500 Sobic008G015600--Sobic010G182500 Sobic002G266200 Sobic002G266200 Sobic008G015600--Sobic002G266200 Sobic006G030700 Sobic006G030700 Sobic008G015600--Sobic006G030700 Sobic001G280200 Sobic001G280200 Sobic008G015600--Sobic001G280200 Sobic008G153400 Sobic008G153400 Sobic008G015600--Sobic008G153400 Sobic001G162700 Sobic001G162700 Sobic008G015600--Sobic001G162700 Sobic002G409500 Sobic002G409500 Sobic008G015600--Sobic002G409500 Sobic009G007300 Sobic009G007300 Sobic010G270200--Sobic009G007300 Sobic006G080700 Sobic006G080700 Sobic010G270200--Sobic006G080700 Sobic004G008200 Sobic004G008200 Sobic010G270200--Sobic004G008200 Sobic002G180800 Sobic002G180800 Sobic010G270200--Sobic002G180800 Sobic010G270200--Sobic006G132600 Sobic004G134900 Sobic004G134900 Sobic010G270200--Sobic004G134900 Sobic010G270200--Sobic006G166400 Sobic001G225800 Sobic001G225800 Sobic010G270200--Sobic001G225800 Sobic001G367301 Sobic001G367301 Sobic010G270200--Sobic001G367301 Sobic001G522800 Sobic001G522800 Sobic004G051500--Sobic001G522800 Sobic004G252850 Sobic004G252850 Sobic004G051500--Sobic004G252850 Sobic003G307500 Sobic003G307500 Sobic004G051500--Sobic003G307500 Sobic004G349500 Sobic004G349500 Sobic004G051500--Sobic004G349500 Sobic004G351932 Sobic004G351932 Sobic004G051500--Sobic004G351932 Sobic001G005400 Sobic001G005400 Sobic004G051500--Sobic001G005400 Sobic009G021000 Sobic009G021000 Sobic004G051500--Sobic009G021000 Sobic006G066050 Sobic006G066050 Sobic004G051500--Sobic006G066050 Sobic010G082300 Sobic010G082300 Sobic004G051500--Sobic010G082300 Sobic006G132600--Sobic002G180800 Sobic006G132600--Sobic010G270200 Sobic010G158000 Sobic010G158000 Sobic006G132600--Sobic010G158000 Sobic003G038400 Sobic003G038400 Sobic006G132600--Sobic003G038400 Sobic004G077300 Sobic004G077300 Sobic006G132600--Sobic004G077300 Sobic006G132600--Sobic009G007300 Sobic009G055500 Sobic009G055500 Sobic006G132600--Sobic009G055500 Sobic006G132600--Sobic006G080700 Sobic008G054200 Sobic008G054200 Sobic006G132600--Sobic008G054200 Sobic001G434650--Sobic006G166400 Sobic003G306500 Sobic003G306500 Sobic001G434650--Sobic003G306500 Sobic004G176200 Sobic004G176200 Sobic001G434650--Sobic004G176200 Sobic001G434650--Sobic006G080700 Sobic001G434650--Sobic001G367301 Sobic004G064200 Sobic004G064200 Sobic001G434650--Sobic004G064200 Sobic001G434650--Sobic002G180800 Sobic001G434650--Sobic006G077700 Sobic001G434650--Sobic004G134900 Sobic003G054800 Sobic003G054800 Sobic006G077700--Sobic003G054800 Sobic006G018701 Sobic006G018701 Sobic006G077700--Sobic006G018701 Sobic002G406801 Sobic002G406801 Sobic006G077700--Sobic002G406801 Sobic006G077700--Sobic009G021000 Sobic006G077700--Sobic006G066050 Sobic001G380000 Sobic001G380000 Sobic006G077700--Sobic001G380000 Sobic007G161100 Sobic007G161100 Sobic006G077700--Sobic007G161100 Sobic004G059200 Sobic004G059200 Sobic006G077700--Sobic004G059200 Sobic009G158300 Sobic009G158300 Sobic006G077700--Sobic009G158300 Sobic006G166400--Sobic003G306500 Sobic006G166400--Sobic001G367301 Sobic006G166400--Sobic006G080700 Sobic006G166400--Sobic004G134900 Sobic005G110460 Sobic005G110460 Sobic006G166400--Sobic005G110460 Sobic006G166400--Sobic001G225800 Sobic006G267100 Sobic006G267100 Sobic006G166400--Sobic006G267100 Sobic004G074600 Sobic004G074600 Sobic006G166400--Sobic004G074600 Sobic001G103100 Sobic001G103100 Sobic006G166400--Sobic001G103100 Sobic002G381800--Sobic010G082300 Sobic003G302600 Sobic003G302600 Sobic002G381800--Sobic003G302600 Sobic009G176200 Sobic009G176200 Sobic002G381800--Sobic009G176200 Sobic002G381800--Sobic001G005400 Sobic003G061600 Sobic003G061600 Sobic002G381800--Sobic003G061600 Sobic002G381800--Sobic004G252850 Sobic004G348000 Sobic004G348000 Sobic002G381800--Sobic004G348000 Sobic003G211000 Sobic003G211000 Sobic002G381800--Sobic003G211000 Sobic009G170900 Sobic009G170900 Sobic002G381800--Sobic009G170900 Sobic002G139600 Sobic002G139600 Sobic004G198800--Sobic002G139600 Sobic003G308800 Sobic003G308800 Sobic004G198800--Sobic003G308800 Sobic004G198800--Sobic006G166400 Sobic003G377000 Sobic003G377000 Sobic004G198800--Sobic003G377000 Sobic002G007800 Sobic002G007800 Sobic004G198800--Sobic002G007800 Sobic004G256700 Sobic004G256700 Sobic004G198800--Sobic004G256700 Sobic001G387200 Sobic001G387200 Sobic004G198800--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic004G198800--Sobic006G120900 Sobic003G129900 Sobic003G129900 Sobic004G198800--Sobic003G129900
Octagon: transcription factors


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