Gene annotation
Transcriptome id Sobic.001G434650.1,Sobic.001G434650.2
Synonym -
Functional annotation -
UniProt A0A1Z5SAF2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
2 Sobic.003G306500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
3 Sobic.004G176200 SacI homology domain containing protein, expressed -
4 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
5 Sobic.001G367301 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
6 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
7 Sobic.002G180800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
8 Sobic.006G077700 - -
9 Sobic.004G134900 - -
10 Sobic.004G008200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
11 Sobic.005G110460 - -
12 Sobic.001G225800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
13 Sobic.009G152000 Yip1 domain containing protein, expressed -
14 Sobic.003G269400 regulator of chromosome condensation, putative, expressed -
15 Sobic.008G159701 - -
16 Sobic.007G223400 ZOS2-06 - C2H2 zinc finger protein, expressed -
17 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
18 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.005G054401 - -
20 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G434650 Sobic001G434650 Sobic006G166400 Sobic006G166400 Sobic001G434650--Sobic006G166400 Sobic003G306500 Sobic003G306500 Sobic001G434650--Sobic003G306500 Sobic004G176200 Sobic004G176200 Sobic001G434650--Sobic004G176200 Sobic006G080700 Sobic006G080700 Sobic001G434650--Sobic006G080700 Sobic001G367301 Sobic001G367301 Sobic001G434650--Sobic001G367301 Sobic004G064200 Sobic004G064200 Sobic001G434650--Sobic004G064200 Sobic002G180800 Sobic002G180800 Sobic001G434650--Sobic002G180800 Sobic006G077700 Sobic006G077700 Sobic001G434650--Sobic006G077700 Sobic004G134900 Sobic004G134900 Sobic001G434650--Sobic004G134900 Sobic006G166400--Sobic003G306500 Sobic006G166400--Sobic001G367301 Sobic006G166400--Sobic006G080700 Sobic006G166400--Sobic004G134900 Sobic005G110460 Sobic005G110460 Sobic006G166400--Sobic005G110460 Sobic001G225800 Sobic001G225800 Sobic006G166400--Sobic001G225800 Sobic006G267100 Sobic006G267100 Sobic006G166400--Sobic006G267100 Sobic004G074600 Sobic004G074600 Sobic006G166400--Sobic004G074600 Sobic001G103100 Sobic001G103100 Sobic006G166400--Sobic001G103100 Sobic003G306500--Sobic006G166400 Sobic003G306500--Sobic006G267100 Sobic006G064450 Sobic006G064450 Sobic003G306500--Sobic006G064450 Sobic003G133600 Sobic003G133600 Sobic003G306500--Sobic003G133600 Sobic003G306500--Sobic005G110460 Sobic001G068066 Sobic001G068066 Sobic003G306500--Sobic001G068066 Sobic007G094700 Sobic007G094700 Sobic003G306500--Sobic007G094700 Sobic007G219601 Sobic007G219601 Sobic003G306500--Sobic007G219601 Sobic005G078000 Sobic005G078000 Sobic003G306500--Sobic005G078000 Sobic003G385300 Sobic003G385300 Sobic004G176200--Sobic003G385300 Sobic002G103800 Sobic002G103800 Sobic004G176200--Sobic002G103800 Sobic007G004300 Sobic007G004300 Sobic004G176200--Sobic007G004300 Sobic004G077300 Sobic004G077300 Sobic004G176200--Sobic004G077300 Sobic004G176200--Sobic004G064200 Sobic001G257800 Sobic001G257800 Sobic004G176200--Sobic001G257800 Sobic004G176200--Sobic002G180800 Sobic001G356200 Sobic001G356200 Sobic004G176200--Sobic001G356200 Sobic004G176200--Sobic006G080700 Sobic009G007300 Sobic009G007300 Sobic006G080700--Sobic009G007300 Sobic006G080700--Sobic004G064200 Sobic006G080700--Sobic001G225800 Sobic008G078200 Sobic008G078200 Sobic006G080700--Sobic008G078200 Sobic010G114200 Sobic010G114200 Sobic006G080700--Sobic010G114200 Sobic006G080700--Sobic005G110460 Sobic009G068400 Sobic009G068400 Sobic006G080700--Sobic009G068400 Sobic009G152000 Sobic009G152000 Sobic006G080700--Sobic009G152000 Sobic010G179600 Sobic010G179600 Sobic006G080700--Sobic010G179600 Sobic001G367301--Sobic001G225800 Sobic008G159701 Sobic008G159701 Sobic001G367301--Sobic008G159701 Sobic001G367301--Sobic005G110460 Sobic004G290600 Sobic004G290600 Sobic001G367301--Sobic004G290600 Sobic010G003200 Sobic010G003200 Sobic001G367301--Sobic010G003200 Sobic001G367301--Sobic004G134900 Sobic001G367301--Sobic001G103100 Sobic002G372000 Sobic002G372000 Sobic001G367301--Sobic002G372000 Sobic006G204500 Sobic006G204500 Sobic001G367301--Sobic006G204500 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic004G064200--Sobic010G179600 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic004G064200--Sobic001G225800 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic002G180800--Sobic004G064200 Sobic002G180800--Sobic006G080700 Sobic002G180800--Sobic010G114200 Sobic008G054200 Sobic008G054200 Sobic002G180800--Sobic008G054200 Sobic002G074800 Sobic002G074800 Sobic002G180800--Sobic002G074800 Sobic002G180800--Sobic009G007300 Sobic002G180800--Sobic003G014200 Sobic002G180800--Sobic002G103800 Sobic003G024400 Sobic003G024400 Sobic002G180800--Sobic003G024400 Sobic003G054800 Sobic003G054800 Sobic006G077700--Sobic003G054800 Sobic006G018701 Sobic006G018701 Sobic006G077700--Sobic006G018701 Sobic002G406801 Sobic002G406801 Sobic006G077700--Sobic002G406801 Sobic009G021000 Sobic009G021000 Sobic006G077700--Sobic009G021000 Sobic006G066050 Sobic006G066050 Sobic006G077700--Sobic006G066050 Sobic001G380000 Sobic001G380000 Sobic006G077700--Sobic001G380000 Sobic007G161100 Sobic007G161100 Sobic006G077700--Sobic007G161100 Sobic004G059200 Sobic004G059200 Sobic006G077700--Sobic004G059200 Sobic009G158300 Sobic009G158300 Sobic006G077700--Sobic009G158300 Sobic005G035250 Sobic005G035250 Sobic004G134900--Sobic005G035250 Sobic007G148233 Sobic007G148233 Sobic004G134900--Sobic007G148233 Sobic001G539880 Sobic001G539880 Sobic004G134900--Sobic001G539880 Sobic002G225800 Sobic002G225800 Sobic004G134900--Sobic002G225800 Sobic003G195400 Sobic003G195400 Sobic004G134900--Sobic003G195400 Sobic004G024800 Sobic004G024800 Sobic004G134900--Sobic004G024800 Sobic002G128700 Sobic002G128700 Sobic004G134900--Sobic002G128700 Sobic005G035200 Sobic005G035200 Sobic004G134900--Sobic005G035200 Sobic005G009700 Sobic005G009700 Sobic004G134900--Sobic005G009700
Octagon: transcription factors


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