Gene annotation
Transcriptome id Sobic.003G269400.2
Synonym Sb03g032200
Functional annotation regulator of chromosome condensation, putative, expressed
UniProt C5XHK2
Pfam PF13713 PF01363 PF08381 PF00415
Panther DB PTHR22870 PTHR22870:SF87
NCBI CDD KOG1427; Uncharacterized conserved protein, contains RCC1 domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14368 : Regulator of chromosome condensation (RCC1) family protein
RAP-DB (Rice) LOC_Os01g50470.1 : regulator of chromosome condensation, putative, expressed
MaizeGDB (Corn) Zm00025a044431 , Zm00025a038909
Brachypodium -
Barley HORVU1Hr1G078890.39 , HORVU1Hr1G078890.38 , HORVU1Hr1G078890.19 , HORVU1Hr1G078890.18 , HORVU1Hr1G078890.33 , HORVU1Hr1G078890.11 , HORVU1Hr1G078890.17 , HORVU1Hr1G078890.15 , HORVU1Hr1G078890.32 , HORVU1Hr1G078890.9 , HORVU1Hr1G078890.3 , HORVU1Hr1G078890.1 , HORVU1Hr1G078890.7 , HORVU1Hr1G078890.5 , HORVU1Hr1G078890.4 , HORVU1Hr1G078890.2 , HORVU1Hr1G078890.40 , HORVU1Hr1G078890.20 , HORVU1Hr1G078890.35 , HORVU1Hr1G078890.34 , HORVU1Hr1G078890.37 , HORVU1Hr1G078890.36 , HORVU1Hr1G078890.31 , HORVU1Hr1G078890.30 , HORVU1Hr1G078890.13 , HORVU1Hr1G078890.12 , HORVU1Hr1G078890.10 , HORVU1Hr1G078890.16 , HORVU1Hr1G078890.8 , HORVU1Hr1G078890.14 , HORVU1Hr1G078890.6 , HORVU1Hr1G078890.22 , HORVU1Hr1G078890.23 , HORVU1Hr1G078890.21 , HORVU1Hr1G078890.26 , HORVU1Hr1G078890.27 , HORVU1Hr1G078890.24 , HORVU1Hr1G078890.25 , HORVU1Hr1G078890.28 , HORVU1Hr1G078890.29
Wheat TraesCS1A02G366800 , TraesCS1B02G384600 , TraesCS1D02G372300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
2 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.001G340800 exocyst complex component 6, putative, expressed -
4 Sobic.001G103100 DNA binding protein, putative, expressed -
5 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
6 Sobic.004G171100 expressed protein -
7 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
8 Sobic.002G111100 expressed protein -
9 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
10 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
11 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
12 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
14 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.002G372000 - -
16 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
17 Sobic.006G097400 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
18 Sobic.001G254000 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
19 Sobic.004G295050 - -
20 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G269400 Sobic003G269400 Sobic006G143900 Sobic006G143900 Sobic003G269400--Sobic006G143900 Sobic003G244400 Sobic003G244400 Sobic003G269400--Sobic003G244400 Sobic001G340800 Sobic001G340800 Sobic003G269400--Sobic001G340800 Sobic001G103100 Sobic001G103100 Sobic003G269400--Sobic001G103100 Sobic010G003200 Sobic010G003200 Sobic003G269400--Sobic010G003200 Sobic004G171100 Sobic004G171100 Sobic003G269400--Sobic004G171100 Sobic001G370400 Sobic001G370400 Sobic003G269400--Sobic001G370400 Sobic002G111100 Sobic002G111100 Sobic003G269400--Sobic002G111100 Sobic006G204400 Sobic006G204400 Sobic003G269400--Sobic006G204400 Sobic004G273600 Sobic004G273600 Sobic006G143900--Sobic004G273600 Sobic005G145400 Sobic005G145400 Sobic006G143900--Sobic005G145400 Sobic007G176900 Sobic007G176900 Sobic006G143900--Sobic007G176900 Sobic001G135950 Sobic001G135950 Sobic006G143900--Sobic001G135950 Sobic004G295050 Sobic004G295050 Sobic006G143900--Sobic004G295050 Sobic010G001200 Sobic010G001200 Sobic006G143900--Sobic010G001200 Sobic005G037700 Sobic005G037700 Sobic006G143900--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic006G143900--Sobic003G420500 Sobic003G333100 Sobic003G333100 Sobic006G143900--Sobic003G333100 Sobic003G244400--Sobic001G370400 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic003G244400--Sobic010G003200 Sobic001G340800--Sobic001G370400 Sobic009G061601 Sobic009G061601 Sobic001G340800--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic001G340800--Sobic003G093100 Sobic001G103100--Sobic007G091400 Sobic010G016200 Sobic010G016200 Sobic001G103100--Sobic010G016200 Sobic009G105100 Sobic009G105100 Sobic001G103100--Sobic009G105100 Sobic001G103100--Sobic005G145400 Sobic004G099200 Sobic004G099200 Sobic001G103100--Sobic004G099200 Sobic010G276100 Sobic010G276100 Sobic001G103100--Sobic010G276100 Sobic009G175400 Sobic009G175400 Sobic001G103100--Sobic009G175400 Sobic004G071900 Sobic004G071900 Sobic001G103100--Sobic004G071900 Sobic010G252600 Sobic010G252600 Sobic001G103100--Sobic010G252600 Sobic010G003200--Sobic004G273600 Sobic010G003200--Sobic009G105100 Sobic003G151400 Sobic003G151400 Sobic010G003200--Sobic003G151400 Sobic002G295800 Sobic002G295800 Sobic010G003200--Sobic002G295800 Sobic010G003200--Sobic010G252600 Sobic002G372000 Sobic002G372000 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100 Sobic006G032000 Sobic006G032000 Sobic004G171100--Sobic006G032000 Sobic010G257800 Sobic010G257800 Sobic004G171100--Sobic010G257800 Sobic010G271600 Sobic010G271600 Sobic004G171100--Sobic010G271600 Sobic009G098400 Sobic009G098400 Sobic004G171100--Sobic009G098400 Sobic004G187400 Sobic004G187400 Sobic004G171100--Sobic004G187400 Sobic010G190500 Sobic010G190500 Sobic004G171100--Sobic010G190500 Sobic002G279900 Sobic002G279900 Sobic004G171100--Sobic002G279900 Sobic005G214700 Sobic005G214700 Sobic004G171100--Sobic005G214700 Sobic006G173400 Sobic006G173400 Sobic004G171100--Sobic006G173400 Sobic001G370400--Sobic009G061601 Sobic003G297100 Sobic003G297100 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic001G370400--Sobic007G131000 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G370400--Sobic001G294500 Sobic001G106800 Sobic001G106800 Sobic002G111100--Sobic001G106800 Sobic002G030300 Sobic002G030300 Sobic002G111100--Sobic002G030300 Sobic002G111100--Sobic002G372000 Sobic001G254000 Sobic001G254000 Sobic002G111100--Sobic001G254000 Sobic002G384500 Sobic002G384500 Sobic002G111100--Sobic002G384500 Sobic008G056700 Sobic008G056700 Sobic002G111100--Sobic008G056700 Sobic010G124900 Sobic010G124900 Sobic002G111100--Sobic010G124900 Sobic003G243300 Sobic003G243300 Sobic002G111100--Sobic003G243300 Sobic002G111100--Sobic002G295800 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic006G204400--Sobic007G176900 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401
Octagon: transcription factors


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