Gene annotation
Transcriptome id Sobic.010G270200.3,Sobic.010G270200.1
Synonym Sb10g030510, SEN1, ATSEN1, DIN1
Functional annotation rhodanese-like domain containing protein, putative, expressed
UniProt C5Z1Z2 , A0A1W0VV46
Pfam PF00581
Panther DB PTHR12231
NCBI CDD KOG1530; Rhodanese-related sulfurtransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35770 : Rhodanese/Cell cycle control phosphatase superfamily protein
RAP-DB (Rice) LOC_Os06g50930.1 : rhodanese-like domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G467800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G007300 expressed protein -
2 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
3 Sobic.004G008200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
4 Sobic.002G180800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
5 Sobic.006G132600 - -
6 Sobic.004G134900 - -
7 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
8 Sobic.001G225800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
9 Sobic.001G367301 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
10 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
11 Sobic.008G085050 - -
12 Sobic.003G022400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, acting on carbon-nitrogen, putative, expressed -
13 Sobic.010G274100 spotted leaf 11, putative, expressed -
14 Sobic.006G077700 - -
15 Sobic.005G035250 - -
16 Sobic.008G011901 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
17 Sobic.007G221932 - -
18 Sobic.004G024800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
19 Sobic.004G336401 - -
20 Sobic.005G035200 - -


Gene co-expression network
sample Sobic010G270200 Sobic010G270200 Sobic009G007300 Sobic009G007300 Sobic010G270200--Sobic009G007300 Sobic006G080700 Sobic006G080700 Sobic010G270200--Sobic006G080700 Sobic004G008200 Sobic004G008200 Sobic010G270200--Sobic004G008200 Sobic002G180800 Sobic002G180800 Sobic010G270200--Sobic002G180800 Sobic006G132600 Sobic006G132600 Sobic010G270200--Sobic006G132600 Sobic004G134900 Sobic004G134900 Sobic010G270200--Sobic004G134900 Sobic006G166400 Sobic006G166400 Sobic010G270200--Sobic006G166400 Sobic001G225800 Sobic001G225800 Sobic010G270200--Sobic001G225800 Sobic001G367301 Sobic001G367301 Sobic010G270200--Sobic001G367301 Sobic009G007300--Sobic006G080700 Sobic009G007300--Sobic001G225800 Sobic008G078200 Sobic008G078200 Sobic009G007300--Sobic008G078200 Sobic004G064200 Sobic004G064200 Sobic009G007300--Sobic004G064200 Sobic009G068400 Sobic009G068400 Sobic009G007300--Sobic009G068400 Sobic007G198900 Sobic007G198900 Sobic009G007300--Sobic007G198900 Sobic010G179600 Sobic010G179600 Sobic009G007300--Sobic010G179600 Sobic002G060000 Sobic002G060000 Sobic009G007300--Sobic002G060000 Sobic010G114200 Sobic010G114200 Sobic009G007300--Sobic010G114200 Sobic006G080700--Sobic009G007300 Sobic006G080700--Sobic004G064200 Sobic006G080700--Sobic001G225800 Sobic006G080700--Sobic008G078200 Sobic006G080700--Sobic010G114200 Sobic005G110460 Sobic005G110460 Sobic006G080700--Sobic005G110460 Sobic006G080700--Sobic009G068400 Sobic009G152000 Sobic009G152000 Sobic006G080700--Sobic009G152000 Sobic006G080700--Sobic010G179600 Sobic010G274100 Sobic010G274100 Sobic004G008200--Sobic010G274100 Sobic004G008200--Sobic004G134900 Sobic008G057800 Sobic008G057800 Sobic004G008200--Sobic008G057800 Sobic005G035250 Sobic005G035250 Sobic004G008200--Sobic005G035250 Sobic008G011901 Sobic008G011901 Sobic004G008200--Sobic008G011901 Sobic002G145400 Sobic002G145400 Sobic004G008200--Sobic002G145400 Sobic008G097800 Sobic008G097800 Sobic004G008200--Sobic008G097800 Sobic003G195400 Sobic003G195400 Sobic004G008200--Sobic003G195400 Sobic005G035200 Sobic005G035200 Sobic004G008200--Sobic005G035200 Sobic002G180800--Sobic004G064200 Sobic002G180800--Sobic006G080700 Sobic002G180800--Sobic010G114200 Sobic008G054200 Sobic008G054200 Sobic002G180800--Sobic008G054200 Sobic002G074800 Sobic002G074800 Sobic002G180800--Sobic002G074800 Sobic002G180800--Sobic009G007300 Sobic003G014200 Sobic003G014200 Sobic002G180800--Sobic003G014200 Sobic002G103800 Sobic002G103800 Sobic002G180800--Sobic002G103800 Sobic003G024400 Sobic003G024400 Sobic002G180800--Sobic003G024400 Sobic006G132600--Sobic002G180800 Sobic006G132600--Sobic010G270200 Sobic010G158000 Sobic010G158000 Sobic006G132600--Sobic010G158000 Sobic003G038400 Sobic003G038400 Sobic006G132600--Sobic003G038400 Sobic004G077300 Sobic004G077300 Sobic006G132600--Sobic004G077300 Sobic006G132600--Sobic009G007300 Sobic009G055500 Sobic009G055500 Sobic006G132600--Sobic009G055500 Sobic006G132600--Sobic006G080700 Sobic006G132600--Sobic008G054200 Sobic004G134900--Sobic005G035250 Sobic007G148233 Sobic007G148233 Sobic004G134900--Sobic007G148233 Sobic001G539880 Sobic001G539880 Sobic004G134900--Sobic001G539880 Sobic002G225800 Sobic002G225800 Sobic004G134900--Sobic002G225800 Sobic004G134900--Sobic003G195400 Sobic004G024800 Sobic004G024800 Sobic004G134900--Sobic004G024800 Sobic002G128700 Sobic002G128700 Sobic004G134900--Sobic002G128700 Sobic004G134900--Sobic005G035200 Sobic005G009700 Sobic005G009700 Sobic004G134900--Sobic005G009700 Sobic003G306500 Sobic003G306500 Sobic006G166400--Sobic003G306500 Sobic006G166400--Sobic001G367301 Sobic006G166400--Sobic006G080700 Sobic006G166400--Sobic004G134900 Sobic006G166400--Sobic005G110460 Sobic006G166400--Sobic001G225800 Sobic006G267100 Sobic006G267100 Sobic006G166400--Sobic006G267100 Sobic004G074600 Sobic004G074600 Sobic006G166400--Sobic004G074600 Sobic001G103100 Sobic001G103100 Sobic006G166400--Sobic001G103100 Sobic001G225800--Sobic005G110460 Sobic010G276100 Sobic010G276100 Sobic001G225800--Sobic010G276100 Sobic004G002800 Sobic004G002800 Sobic001G225800--Sobic004G002800 Sobic003G335200 Sobic003G335200 Sobic001G225800--Sobic003G335200 Sobic001G252900 Sobic001G252900 Sobic001G225800--Sobic001G252900 Sobic005G025600 Sobic005G025600 Sobic001G225800--Sobic005G025600 Sobic009G075400 Sobic009G075400 Sobic001G225800--Sobic009G075400 Sobic005G023700 Sobic005G023700 Sobic001G225800--Sobic005G023700 Sobic010G006900 Sobic010G006900 Sobic001G225800--Sobic010G006900 Sobic001G367301--Sobic001G225800 Sobic008G159701 Sobic008G159701 Sobic001G367301--Sobic008G159701 Sobic001G367301--Sobic005G110460 Sobic004G290600 Sobic004G290600 Sobic001G367301--Sobic004G290600 Sobic010G003200 Sobic010G003200 Sobic001G367301--Sobic010G003200 Sobic001G367301--Sobic004G134900 Sobic001G367301--Sobic001G103100 Sobic002G372000 Sobic002G372000 Sobic001G367301--Sobic002G372000 Sobic006G204500 Sobic006G204500 Sobic001G367301--Sobic006G204500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.