Gene annotation
Transcriptome id Sobic.007G144300.1
Synonym TPS5, Sb07g021920, ATTPS5
Functional annotation trehalose-6-phosphate synthase, putative, expressed
UniProt C5YLP6
Pfam PF08282 PF00982
Panther DB PTHR10788 PTHR10788:SF24
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G17770 : trehalose phosphatase/synthase 5
RAP-DB (Rice) LOC_Os08g34580.1 : trehalose-6-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a030710 , Zm00025a005826
Brachypodium KQJ98491 , KQK01089 , KQK01091 , KQK01090
Barley -
Wheat TraesCS6A02G351300 , TraesCS6D02G334000 , TraesCS6D02G334000 , TraesCS6B02G384500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
2 Sobic.003G061900 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
3 Sobic.003G189700 thioredoxin, putative, expressed -
4 Sobic.003G189200 expressed protein -
5 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
6 Sobic.002G236200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor BIM2, putative, expressed -
7 Sobic.009G178850 - -
8 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
9 Sobic.003G088100 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
10 Sobic.006G107400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
12 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
13 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
14 Sobic.004G267500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
15 Sobic.006G208800 YT521-B, putative, expressed -
16 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -
17 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
18 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
20 Sobic.001G474200 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A


Gene co-expression network
sample Sobic007G144300 Sobic007G144300 Sobic003G396000 Sobic003G396000 Sobic007G144300--Sobic003G396000 Sobic003G061900 Sobic003G061900 Sobic007G144300--Sobic003G061900 Sobic003G189700 Sobic003G189700 Sobic007G144300--Sobic003G189700 Sobic003G189200 Sobic003G189200 Sobic007G144300--Sobic003G189200 Sobic003G000600 Sobic003G000600 Sobic007G144300--Sobic003G000600 Sobic002G236200 Sobic002G236200 Sobic007G144300--Sobic002G236200 Sobic009G178850 Sobic009G178850 Sobic007G144300--Sobic009G178850 Sobic005G139700 Sobic005G139700 Sobic007G144300--Sobic005G139700 Sobic003G088100 Sobic003G088100 Sobic007G144300--Sobic003G088100 Sobic001G441600 Sobic001G441600 Sobic003G396000--Sobic001G441600 Sobic006G218700 Sobic006G218700 Sobic003G396000--Sobic006G218700 Sobic003G379700 Sobic003G379700 Sobic003G396000--Sobic003G379700 Sobic010G204300 Sobic010G204300 Sobic003G396000--Sobic010G204300 Sobic001G076000 Sobic001G076000 Sobic003G396000--Sobic001G076000 Sobic003G332401 Sobic003G332401 Sobic003G396000--Sobic003G332401 Sobic004G293700 Sobic004G293700 Sobic003G396000--Sobic004G293700 Sobic001G478300 Sobic001G478300 Sobic003G396000--Sobic001G478300 Sobic009G059700 Sobic009G059700 Sobic003G396000--Sobic009G059700 Sobic001G147200 Sobic001G147200 Sobic003G061900--Sobic001G147200 Sobic010G246000 Sobic010G246000 Sobic003G061900--Sobic010G246000 Sobic006G263100 Sobic006G263100 Sobic003G061900--Sobic006G263100 Sobic001G085900 Sobic001G085900 Sobic003G061900--Sobic001G085900 Sobic001G330700 Sobic001G330700 Sobic003G061900--Sobic001G330700 Sobic003G061900--Sobic010G204300 Sobic001G158500 Sobic001G158500 Sobic003G061900--Sobic001G158500 Sobic007G059900 Sobic007G059900 Sobic003G061900--Sobic007G059900 Sobic002G395600 Sobic002G395600 Sobic003G061900--Sobic002G395600 Sobic010G017000 Sobic010G017000 Sobic003G189700--Sobic010G017000 Sobic004G083000 Sobic004G083000 Sobic003G189700--Sobic004G083000 Sobic009G160200 Sobic009G160200 Sobic003G189700--Sobic009G160200 Sobic006G217700 Sobic006G217700 Sobic003G189700--Sobic006G217700 Sobic003G189700--Sobic002G236200 Sobic003G189700--Sobic002G395600 Sobic002G121000 Sobic002G121000 Sobic003G189700--Sobic002G121000 Sobic003G038600 Sobic003G038600 Sobic003G189700--Sobic003G038600 Sobic010G238700 Sobic010G238700 Sobic003G189700--Sobic010G238700 Sobic002G224100 Sobic002G224100 Sobic003G189200--Sobic002G224100 Sobic007G025700 Sobic007G025700 Sobic003G189200--Sobic007G025700 Sobic004G307000 Sobic004G307000 Sobic003G189200--Sobic004G307000 Sobic004G304400 Sobic004G304400 Sobic003G189200--Sobic004G304400 Sobic003G363200 Sobic003G363200 Sobic003G189200--Sobic003G363200 Sobic003G429300 Sobic003G429300 Sobic003G189200--Sobic003G429300 Sobic001G474200 Sobic001G474200 Sobic003G189200--Sobic001G474200 Sobic008G111100 Sobic008G111100 Sobic003G189200--Sobic008G111100 Sobic005G212700 Sobic005G212700 Sobic003G189200--Sobic005G212700 Sobic008G144500 Sobic008G144500 Sobic003G000600--Sobic008G144500 Sobic006G086100 Sobic006G086100 Sobic003G000600--Sobic006G086100 Sobic009G142200 Sobic009G142200 Sobic003G000600--Sobic009G142200 Sobic003G146000 Sobic003G146000 Sobic003G000600--Sobic003G146000 Sobic006G086000 Sobic006G086000 Sobic003G000600--Sobic006G086000 Sobic007G125900 Sobic007G125900 Sobic003G000600--Sobic007G125900 Sobic001G028000 Sobic001G028000 Sobic003G000600--Sobic001G028000 Sobic004G236550 Sobic004G236550 Sobic003G000600--Sobic004G236550 Sobic002G355200 Sobic002G355200 Sobic003G000600--Sobic002G355200 Sobic002G236200--Sobic010G238700 Sobic002G236200--Sobic002G121000 Sobic001G230900 Sobic001G230900 Sobic002G236200--Sobic001G230900 Sobic009G036900 Sobic009G036900 Sobic002G236200--Sobic009G036900 Sobic009G157900 Sobic009G157900 Sobic002G236200--Sobic009G157900 Sobic002G068300 Sobic002G068300 Sobic002G236200--Sobic002G068300 Sobic002G236200--Sobic003G189700 Sobic009G034400 Sobic009G034400 Sobic002G236200--Sobic009G034400 Sobic010G144400 Sobic010G144400 Sobic002G236200--Sobic010G144400 Sobic009G178850--Sobic005G139700 Sobic003G431000 Sobic003G431000 Sobic009G178850--Sobic003G431000 Sobic006G107400 Sobic006G107400 Sobic009G178850--Sobic006G107400 Sobic009G178850--Sobic003G363200 Sobic007G156600 Sobic007G156600 Sobic009G178850--Sobic007G156600 Sobic009G178850--Sobic007G144300 Sobic009G178850--Sobic001G028000 Sobic009G178850--Sobic003G088100 Sobic006G274300 Sobic006G274300 Sobic009G178850--Sobic006G274300 Sobic005G139700--Sobic003G363200 Sobic010G245800 Sobic010G245800 Sobic005G139700--Sobic010G245800 Sobic001G290400 Sobic001G290400 Sobic005G139700--Sobic001G290400 Sobic002G197600 Sobic002G197600 Sobic005G139700--Sobic002G197600 Sobic010G200700 Sobic010G200700 Sobic005G139700--Sobic010G200700 Sobic005G139700--Sobic003G431000 Sobic001G051800 Sobic001G051800 Sobic005G139700--Sobic001G051800 Sobic005G139700--Sobic001G028000 Sobic001G403600 Sobic001G403600 Sobic005G139700--Sobic001G403600 Sobic009G252800 Sobic009G252800 Sobic003G088100--Sobic009G252800 Sobic001G408100 Sobic001G408100 Sobic003G088100--Sobic001G408100 Sobic001G434400 Sobic001G434400 Sobic003G088100--Sobic001G434400 Sobic010G066300 Sobic010G066300 Sobic003G088100--Sobic010G066300 Sobic010G045833 Sobic010G045833 Sobic003G088100--Sobic010G045833 Sobic002G427900 Sobic002G427900 Sobic003G088100--Sobic002G427900 Sobic001G130400 Sobic001G130400 Sobic003G088100--Sobic001G130400 Sobic002G138700 Sobic002G138700 Sobic003G088100--Sobic002G138700 Sobic001G525400 Sobic001G525400 Sobic003G088100--Sobic001G525400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.