Gene annotation
Transcriptome id Sobic.007G144900.1
Synonym Sb07g021970, ATGDU3, GDU3, LSB1
Functional annotation GDU1, putative, expressed
UniProt C5YLQ2
Pfam -
Panther DB PTHR33228 PTHR33228:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57685 : glutamine dumper 3
RAP-DB (Rice) LOC_Os08g34700.1 : GDU1, putative, expressed
MaizeGDB (Corn) Zm00025a030720 , Zm00025a005823
Brachypodium PNT68213 , KQK16881 , KQJ95792
Barley HORVU1Hr1G003060.1 , HORVU1Hr1G003060.2 , HORVU4Hr1G013760.1
Wheat TraesCS4A02G234200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G049000 - -
3 Sobic.010G226600 - -
4 Sobic.003G235500 expressed protein -
5 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.001G439200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
8 Sobic.003G237600 expressed protein -
9 Sobic.007G189700 - -
10 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
11 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
12 Sobic.008G147101 - -
13 Sobic.002G228400 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.006G017200 Leucine Rich Repeat family protein, expressed -
15 Sobic.003G309700 decarboxylase, putative, expressed K01592: tyrosine decarboxylase
16 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
17 Sobic.002G323700 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
18 Sobic.008G000300 - -
19 Sobic.008G106200 cytochrome P450, putative, expressed -
20 Sobic.001G303000 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic007G144900 Sobic007G144900 Sobic002G094800 Sobic002G094800 Sobic007G144900--Sobic002G094800 Sobic009G049000 Sobic009G049000 Sobic007G144900--Sobic009G049000 Sobic010G226600 Sobic010G226600 Sobic007G144900--Sobic010G226600 Sobic003G235500 Sobic003G235500 Sobic007G144900--Sobic003G235500 Sobic002G214300 Sobic002G214300 Sobic007G144900--Sobic002G214300 Sobic001G406000 Sobic001G406000 Sobic007G144900--Sobic001G406000 Sobic001G439200 Sobic001G439200 Sobic007G144900--Sobic001G439200 Sobic003G237600 Sobic003G237600 Sobic007G144900--Sobic003G237600 Sobic007G189700 Sobic007G189700 Sobic007G144900--Sobic007G189700 Sobic002G233300 Sobic002G233300 Sobic002G094800--Sobic002G233300 Sobic003G309700 Sobic003G309700 Sobic002G094800--Sobic003G309700 Sobic003G234400 Sobic003G234400 Sobic002G094800--Sobic003G234400 Sobic010G095000 Sobic010G095000 Sobic002G094800--Sobic010G095000 Sobic006G017200 Sobic006G017200 Sobic002G094800--Sobic006G017200 Sobic003G231800 Sobic003G231800 Sobic002G094800--Sobic003G231800 Sobic002G094800--Sobic002G214300 Sobic004G026300 Sobic004G026300 Sobic002G094800--Sobic004G026300 Sobic002G264800 Sobic002G264800 Sobic002G094800--Sobic002G264800 Sobic008G193200 Sobic008G193200 Sobic009G049000--Sobic008G193200 Sobic002G228400 Sobic002G228400 Sobic009G049000--Sobic002G228400 Sobic001G374400 Sobic001G374400 Sobic009G049000--Sobic001G374400 Sobic001G331500 Sobic001G331500 Sobic009G049000--Sobic001G331500 Sobic003G378500 Sobic003G378500 Sobic009G049000--Sobic003G378500 Sobic003G249400 Sobic003G249400 Sobic009G049000--Sobic003G249400 Sobic008G173700 Sobic008G173700 Sobic009G049000--Sobic008G173700 Sobic010G244000 Sobic010G244000 Sobic009G049000--Sobic010G244000 Sobic001G298400 Sobic001G298400 Sobic009G049000--Sobic001G298400 Sobic009G222200 Sobic009G222200 Sobic010G226600--Sobic009G222200 Sobic010G226600--Sobic007G189700 Sobic008G104601 Sobic008G104601 Sobic010G226600--Sobic008G104601 Sobic001G189100 Sobic001G189100 Sobic010G226600--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic010G226600--Sobic010G030800 Sobic010G226600--Sobic003G237600 Sobic005G202600 Sobic005G202600 Sobic010G226600--Sobic005G202600 Sobic004G035700 Sobic004G035700 Sobic010G226600--Sobic004G035700 Sobic003G235500--Sobic010G030800 Sobic003G235500--Sobic003G231800 Sobic003G235500--Sobic007G189700 Sobic010G183100 Sobic010G183100 Sobic003G235500--Sobic010G183100 Sobic003G036100 Sobic003G036100 Sobic003G235500--Sobic003G036100 Sobic009G254600 Sobic009G254600 Sobic003G235500--Sobic009G254600 Sobic003G235500--Sobic001G189100 Sobic003G235500--Sobic001G406000 Sobic004G353700 Sobic004G353700 Sobic002G214300--Sobic004G353700 Sobic002G214300--Sobic001G406000 Sobic002G214300--Sobic003G234400 Sobic002G214300--Sobic007G189700 Sobic002G214300--Sobic003G237600 Sobic002G214300--Sobic003G231800 Sobic002G214300--Sobic003G036100 Sobic002G214300--Sobic001G189100 Sobic006G244000 Sobic006G244000 Sobic001G406000--Sobic006G244000 Sobic001G406000--Sobic007G189700 Sobic001G406000--Sobic004G353700 Sobic001G406000--Sobic010G030800 Sobic001G406000--Sobic008G104601 Sobic001G406000--Sobic003G235500 Sobic001G406000--Sobic003G234400 Sobic001G329400 Sobic001G329400 Sobic001G406000--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic001G406000--Sobic003G431900 Sobic003G266500 Sobic003G266500 Sobic001G439200--Sobic003G266500 Sobic001G439200--Sobic007G189700 Sobic003G256700 Sobic003G256700 Sobic001G439200--Sobic003G256700 Sobic001G439200--Sobic003G431900 Sobic004G073500 Sobic004G073500 Sobic001G439200--Sobic004G073500 Sobic003G199800 Sobic003G199800 Sobic001G439200--Sobic003G199800 Sobic001G011700 Sobic001G011700 Sobic001G439200--Sobic001G011700 Sobic001G439200--Sobic001G406000 Sobic009G104800 Sobic009G104800 Sobic001G439200--Sobic009G104800 Sobic003G237600--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G237600--Sobic001G355600 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic002G040100 Sobic002G040100 Sobic007G189700--Sobic002G040100 Sobic007G189700--Sobic001G406000
Octagon: transcription factors


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