Gene annotation
Transcriptome id Sobic.008G000300.1
Synonym Sb08g000210
Functional annotation -
UniProt C5YPP5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a003645
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G099600 expressed protein -
2 Sobic.003G293700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
3 Sobic.007G131800 Annexin D5(PubMedID : 26320239)@annexin, putative, expressed K17095: annexin A7/11
4 Sobic.002G339400 expressed protein -
5 Sobic.003G118900 disease resistance protein RGA2, putative, expressed -
6 Sobic.005G076600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G299500 expressed protein -
8 Sobic.004G052000 protein kinase, putative, expressed -
9 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
10 Sobic.005G075900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C1-like domain containing protein, expressed -
11 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.001G494150 - -
15 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
16 Sobic.007G194400 exo70 exocyst complex subunit domain containing protein, expressed -
17 Sobic.001G477200 expressed protein K08505: protein transport protein SFT1
18 Sobic.009G028300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
19 Sobic.002G311400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.006G257100 dirigent-like protein pDIR17, putative, expressed -


Gene co-expression network
sample Sobic008G000300 Sobic008G000300 Sobic010G099600 Sobic010G099600 Sobic008G000300--Sobic010G099600 Sobic003G293700 Sobic003G293700 Sobic008G000300--Sobic003G293700 Sobic007G131800 Sobic007G131800 Sobic008G000300--Sobic007G131800 Sobic002G339400 Sobic002G339400 Sobic008G000300--Sobic002G339400 Sobic003G118900 Sobic003G118900 Sobic008G000300--Sobic003G118900 Sobic005G076600 Sobic005G076600 Sobic008G000300--Sobic005G076600 Sobic001G299500 Sobic001G299500 Sobic008G000300--Sobic001G299500 Sobic004G052000 Sobic004G052000 Sobic008G000300--Sobic004G052000 Sobic007G133600 Sobic007G133600 Sobic008G000300--Sobic007G133600 Sobic005G075900 Sobic005G075900 Sobic010G099600--Sobic005G075900 Sobic010G099600--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic010G099600--Sobic002G311400 Sobic001G428700 Sobic001G428700 Sobic010G099600--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic010G099600--Sobic004G288400 Sobic004G202000 Sobic004G202000 Sobic010G099600--Sobic004G202000 Sobic006G157200 Sobic006G157200 Sobic010G099600--Sobic006G157200 Sobic006G166700 Sobic006G166700 Sobic010G099600--Sobic006G166700 Sobic002G348900 Sobic002G348900 Sobic010G099600--Sobic002G348900 Sobic007G124400 Sobic007G124400 Sobic003G293700--Sobic007G124400 Sobic003G293700--Sobic002G339400 Sobic003G293700--Sobic004G288400 Sobic003G293700--Sobic007G133600 Sobic001G071000 Sobic001G071000 Sobic003G293700--Sobic001G071000 Sobic001G494150 Sobic001G494150 Sobic003G293700--Sobic001G494150 Sobic003G293700--Sobic001G428700 Sobic002G245900 Sobic002G245900 Sobic003G293700--Sobic002G245900 Sobic003G293700--Sobic010G099600 Sobic004G335600 Sobic004G335600 Sobic007G131800--Sobic004G335600 Sobic007G131800--Sobic002G245900 Sobic007G131800--Sobic007G133600 Sobic009G008300 Sobic009G008300 Sobic007G131800--Sobic009G008300 Sobic007G131800--Sobic010G099600 Sobic007G131800--Sobic006G157200 Sobic004G042700 Sobic004G042700 Sobic007G131800--Sobic004G042700 Sobic007G131800--Sobic003G118900 Sobic006G206000 Sobic006G206000 Sobic007G131800--Sobic006G206000 Sobic002G366700 Sobic002G366700 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic010G014300 Sobic010G014300 Sobic002G339400--Sobic010G014300 Sobic006G075700 Sobic006G075700 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic010G259200 Sobic010G259200 Sobic002G339400--Sobic010G259200 Sobic003G008300 Sobic003G008300 Sobic003G118900--Sobic003G008300 Sobic003G118900--Sobic007G131800 Sobic001G513100 Sobic001G513100 Sobic003G118900--Sobic001G513100 Sobic003G118900--Sobic006G166700 Sobic003G118900--Sobic010G087200 Sobic001G020500 Sobic001G020500 Sobic003G118900--Sobic001G020500 Sobic002G001300 Sobic002G001300 Sobic003G118900--Sobic002G001300 Sobic003G118900--Sobic002G366700 Sobic003G118900--Sobic002G339400 Sobic005G076600--Sobic006G157200 Sobic004G179600 Sobic004G179600 Sobic005G076600--Sobic004G179600 Sobic006G250500 Sobic006G250500 Sobic005G076600--Sobic006G250500 Sobic004G247600 Sobic004G247600 Sobic005G076600--Sobic004G247600 Sobic005G076600--Sobic005G075900 Sobic005G076600--Sobic002G245900 Sobic009G105600 Sobic009G105600 Sobic005G076600--Sobic009G105600 Sobic004G157000 Sobic004G157000 Sobic005G076600--Sobic004G157000 Sobic005G076600--Sobic007G131800 Sobic009G215400 Sobic009G215400 Sobic001G299500--Sobic009G215400 Sobic003G323800 Sobic003G323800 Sobic001G299500--Sobic003G323800 Sobic001G477200 Sobic001G477200 Sobic001G299500--Sobic001G477200 Sobic007G194400 Sobic007G194400 Sobic001G299500--Sobic007G194400 Sobic001G299500--Sobic004G202000 Sobic004G058500 Sobic004G058500 Sobic001G299500--Sobic004G058500 Sobic003G426300 Sobic003G426300 Sobic001G299500--Sobic003G426300 Sobic004G243000 Sobic004G243000 Sobic001G299500--Sobic004G243000 Sobic003G169966 Sobic003G169966 Sobic001G299500--Sobic003G169966 Sobic003G296700 Sobic003G296700 Sobic004G052000--Sobic003G296700 Sobic010G076600 Sobic010G076600 Sobic004G052000--Sobic010G076600 Sobic001G051600 Sobic001G051600 Sobic004G052000--Sobic001G051600 Sobic003G234000 Sobic003G234000 Sobic004G052000--Sobic003G234000 Sobic007G057100 Sobic007G057100 Sobic004G052000--Sobic007G057100 Sobic009G217600 Sobic009G217600 Sobic004G052000--Sobic009G217600 Sobic006G095600 Sobic006G095600 Sobic004G052000--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic004G052000--Sobic001G077700 Sobic001G513700 Sobic001G513700 Sobic004G052000--Sobic001G513700 Sobic007G133600--Sobic009G008300 Sobic007G133600--Sobic002G245900 Sobic001G239400 Sobic001G239400 Sobic007G133600--Sobic001G239400 Sobic001G005000 Sobic001G005000 Sobic007G133600--Sobic001G005000 Sobic004G249700 Sobic004G249700 Sobic007G133600--Sobic004G249700 Sobic007G133600--Sobic006G166700 Sobic007G133600--Sobic004G288400 Sobic003G057600 Sobic003G057600 Sobic007G133600--Sobic003G057600 Sobic007G133600--Sobic010G087200
Octagon: transcription factors


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