Gene annotation
Transcriptome id Sobic.001G299500.1
Synonym Sb01g029160
Functional annotation expressed protein
UniProt C5WSD5
Pfam -
Panther DB PTHR33622 PTHR33622:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05570 : -
RAP-DB (Rice) LOC_Os08g10400.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G323800 expressed protein -
3 Sobic.001G477200 expressed protein K08505: protein transport protein SFT1
4 Sobic.007G194400 exo70 exocyst complex subunit domain containing protein, expressed -
5 Sobic.004G202000 expressed protein -
6 Sobic.004G058500 cell cycle control protein, putative, expressed -
7 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
9 Sobic.003G169966 - -
10 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.002G261000 expressed protein -
12 Sobic.004G088551 - -
13 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
15 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.003G288100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G206900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.002G235500 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic001G299500 Sobic001G299500 Sobic009G215400 Sobic009G215400 Sobic001G299500--Sobic009G215400 Sobic003G323800 Sobic003G323800 Sobic001G299500--Sobic003G323800 Sobic001G477200 Sobic001G477200 Sobic001G299500--Sobic001G477200 Sobic007G194400 Sobic007G194400 Sobic001G299500--Sobic007G194400 Sobic004G202000 Sobic004G202000 Sobic001G299500--Sobic004G202000 Sobic004G058500 Sobic004G058500 Sobic001G299500--Sobic004G058500 Sobic003G426300 Sobic003G426300 Sobic001G299500--Sobic003G426300 Sobic004G243000 Sobic004G243000 Sobic001G299500--Sobic004G243000 Sobic003G169966 Sobic003G169966 Sobic001G299500--Sobic003G169966 Sobic009G215400--Sobic003G323800 Sobic002G042100 Sobic002G042100 Sobic009G215400--Sobic002G042100 Sobic009G215400--Sobic004G243000 Sobic003G303100 Sobic003G303100 Sobic009G215400--Sobic003G303100 Sobic003G250600 Sobic003G250600 Sobic009G215400--Sobic003G250600 Sobic001G279500 Sobic001G279500 Sobic009G215400--Sobic001G279500 Sobic002G235500 Sobic002G235500 Sobic009G215400--Sobic002G235500 Sobic009G215400--Sobic001G299500 Sobic006G162100 Sobic006G162100 Sobic009G215400--Sobic006G162100 Sobic003G323800--Sobic009G215400 Sobic003G323800--Sobic002G235500 Sobic003G323800--Sobic004G243000 Sobic010G036400 Sobic010G036400 Sobic003G323800--Sobic010G036400 Sobic001G299200 Sobic001G299200 Sobic003G323800--Sobic001G299200 Sobic003G323800--Sobic002G042100 Sobic003G323800--Sobic001G299500 Sobic002G377100 Sobic002G377100 Sobic003G323800--Sobic002G377100 Sobic003G323800--Sobic003G426300 Sobic001G021900 Sobic001G021900 Sobic001G477200--Sobic001G021900 Sobic001G477200--Sobic002G235500 Sobic005G179200 Sobic005G179200 Sobic001G477200--Sobic005G179200 Sobic004G163500 Sobic004G163500 Sobic001G477200--Sobic004G163500 Sobic009G035200 Sobic009G035200 Sobic001G477200--Sobic009G035200 Sobic002G253000 Sobic002G253000 Sobic001G477200--Sobic002G253000 Sobic004G189400 Sobic004G189400 Sobic001G477200--Sobic004G189400 Sobic001G477200--Sobic006G162100 Sobic005G051200 Sobic005G051200 Sobic001G477200--Sobic005G051200 Sobic007G077200 Sobic007G077200 Sobic007G194400--Sobic007G077200 Sobic004G049400 Sobic004G049400 Sobic007G194400--Sobic004G049400 Sobic007G194400--Sobic002G377100 Sobic007G085300 Sobic007G085300 Sobic007G194400--Sobic007G085300 Sobic007G194400--Sobic004G243000 Sobic007G194400--Sobic002G042100 Sobic010G238600 Sobic010G238600 Sobic007G194400--Sobic010G238600 Sobic004G052000 Sobic004G052000 Sobic007G194400--Sobic004G052000 Sobic010G083600 Sobic010G083600 Sobic007G194400--Sobic010G083600 Sobic004G335600 Sobic004G335600 Sobic004G202000--Sobic004G335600 Sobic001G076800 Sobic001G076800 Sobic004G202000--Sobic001G076800 Sobic002G414700 Sobic002G414700 Sobic004G202000--Sobic002G414700 Sobic002G348100 Sobic002G348100 Sobic004G202000--Sobic002G348100 Sobic003G288100 Sobic003G288100 Sobic004G202000--Sobic003G288100 Sobic004G099500 Sobic004G099500 Sobic004G202000--Sobic004G099500 Sobic002G245900 Sobic002G245900 Sobic004G202000--Sobic002G245900 Sobic008G172100 Sobic008G172100 Sobic004G202000--Sobic008G172100 Sobic004G271400 Sobic004G271400 Sobic004G202000--Sobic004G271400 Sobic009G177800 Sobic009G177800 Sobic004G058500--Sobic009G177800 Sobic009G155200 Sobic009G155200 Sobic004G058500--Sobic009G155200 Sobic010G224200 Sobic010G224200 Sobic004G058500--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic004G058500--Sobic002G423300 Sobic004G050000 Sobic004G050000 Sobic004G058500--Sobic004G050000 Sobic003G192100 Sobic003G192100 Sobic004G058500--Sobic003G192100 Sobic002G183200 Sobic002G183200 Sobic004G058500--Sobic002G183200 Sobic008G111100 Sobic008G111100 Sobic004G058500--Sobic008G111100 Sobic004G307000 Sobic004G307000 Sobic004G058500--Sobic004G307000 Sobic005G101800 Sobic005G101800 Sobic003G426300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic003G426300--Sobic009G128700 Sobic010G084400 Sobic010G084400 Sobic003G426300--Sobic010G084400 Sobic003G426000 Sobic003G426000 Sobic003G426300--Sobic003G426000 Sobic003G252800 Sobic003G252800 Sobic003G426300--Sobic003G252800 Sobic001G063000 Sobic001G063000 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic007G227300 Sobic007G227300 Sobic003G426300--Sobic007G227300 Sobic001G400800 Sobic001G400800 Sobic003G426300--Sobic001G400800 Sobic004G338200 Sobic004G338200 Sobic004G243000--Sobic004G338200 Sobic006G233800 Sobic006G233800 Sobic004G243000--Sobic006G233800 Sobic004G243000--Sobic007G194400 Sobic002G373900 Sobic002G373900 Sobic004G243000--Sobic002G373900 Sobic004G243000--Sobic010G036400 Sobic003G314200 Sobic003G314200 Sobic004G243000--Sobic003G314200 Sobic003G268800 Sobic003G268800 Sobic004G243000--Sobic003G268800 Sobic004G243000--Sobic009G215400 Sobic004G243000--Sobic003G323800 Sobic001G319600 Sobic001G319600 Sobic003G169966--Sobic001G319600 Sobic002G361100 Sobic002G361100 Sobic003G169966--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic003G169966--Sobic007G067600 Sobic001G319700 Sobic001G319700 Sobic003G169966--Sobic001G319700 Sobic007G135201 Sobic007G135201 Sobic003G169966--Sobic007G135201 Sobic010G102300 Sobic010G102300 Sobic003G169966--Sobic010G102300 Sobic002G261000 Sobic002G261000 Sobic003G169966--Sobic002G261000 Sobic002G195400 Sobic002G195400 Sobic003G169966--Sobic002G195400 Sobic001G231600 Sobic001G231600 Sobic003G169966--Sobic001G231600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.