Gene annotation
Transcriptome id Sobic.003G323800.1
Synonym Sb03g037020
Functional annotation expressed protein
UniProt C5XME4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g58370.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK10152
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.002G235500 bZIP transcription factor domain containing protein, expressed -
3 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
4 Sobic.010G036400 expressed protein -
5 Sobic.001G299200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
6 Sobic.002G042100 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.001G299500 expressed protein -
8 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
9 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
12 Sobic.010G224100 expressed protein -
13 Sobic.001G021900 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
14 Sobic.007G194400 exo70 exocyst complex subunit domain containing protein, expressed -
15 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
16 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
17 Sobic.001G317700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.002G117100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
19 Sobic.010G102100 expressed protein -
20 Sobic.001G063000 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic003G323800 Sobic003G323800 Sobic009G215400 Sobic009G215400 Sobic003G323800--Sobic009G215400 Sobic002G235500 Sobic002G235500 Sobic003G323800--Sobic002G235500 Sobic004G243000 Sobic004G243000 Sobic003G323800--Sobic004G243000 Sobic010G036400 Sobic010G036400 Sobic003G323800--Sobic010G036400 Sobic001G299200 Sobic001G299200 Sobic003G323800--Sobic001G299200 Sobic002G042100 Sobic002G042100 Sobic003G323800--Sobic002G042100 Sobic001G299500 Sobic001G299500 Sobic003G323800--Sobic001G299500 Sobic002G377100 Sobic002G377100 Sobic003G323800--Sobic002G377100 Sobic003G426300 Sobic003G426300 Sobic003G323800--Sobic003G426300 Sobic009G215400--Sobic003G323800 Sobic009G215400--Sobic002G042100 Sobic009G215400--Sobic004G243000 Sobic003G303100 Sobic003G303100 Sobic009G215400--Sobic003G303100 Sobic003G250600 Sobic003G250600 Sobic009G215400--Sobic003G250600 Sobic001G279500 Sobic001G279500 Sobic009G215400--Sobic001G279500 Sobic009G215400--Sobic002G235500 Sobic009G215400--Sobic001G299500 Sobic006G162100 Sobic006G162100 Sobic009G215400--Sobic006G162100 Sobic010G239300 Sobic010G239300 Sobic002G235500--Sobic010G239300 Sobic001G317200 Sobic001G317200 Sobic002G235500--Sobic001G317200 Sobic002G415100 Sobic002G415100 Sobic002G235500--Sobic002G415100 Sobic006G099900 Sobic006G099900 Sobic002G235500--Sobic006G099900 Sobic009G164600 Sobic009G164600 Sobic002G235500--Sobic009G164600 Sobic001G021900 Sobic001G021900 Sobic002G235500--Sobic001G021900 Sobic001G325000 Sobic001G325000 Sobic002G235500--Sobic001G325000 Sobic003G252800 Sobic003G252800 Sobic002G235500--Sobic003G252800 Sobic007G141500 Sobic007G141500 Sobic002G235500--Sobic007G141500 Sobic004G338200 Sobic004G338200 Sobic004G243000--Sobic004G338200 Sobic006G233800 Sobic006G233800 Sobic004G243000--Sobic006G233800 Sobic007G194400 Sobic007G194400 Sobic004G243000--Sobic007G194400 Sobic002G373900 Sobic002G373900 Sobic004G243000--Sobic002G373900 Sobic004G243000--Sobic010G036400 Sobic003G314200 Sobic003G314200 Sobic004G243000--Sobic003G314200 Sobic003G268800 Sobic003G268800 Sobic004G243000--Sobic003G268800 Sobic004G243000--Sobic009G215400 Sobic004G243000--Sobic003G323800 Sobic001G317700 Sobic001G317700 Sobic010G036400--Sobic001G317700 Sobic010G036400--Sobic004G243000 Sobic007G085300 Sobic007G085300 Sobic010G036400--Sobic007G085300 Sobic005G013901 Sobic005G013901 Sobic010G036400--Sobic005G013901 Sobic001G073800 Sobic001G073800 Sobic010G036400--Sobic001G073800 Sobic004G231001 Sobic004G231001 Sobic010G036400--Sobic004G231001 Sobic010G036400--Sobic003G323800 Sobic010G036400--Sobic003G314200 Sobic006G105200 Sobic006G105200 Sobic010G036400--Sobic006G105200 Sobic006G083201 Sobic006G083201 Sobic001G299200--Sobic006G083201 Sobic004G163500 Sobic004G163500 Sobic001G299200--Sobic004G163500 Sobic003G112500 Sobic003G112500 Sobic001G299200--Sobic003G112500 Sobic004G058500 Sobic004G058500 Sobic001G299200--Sobic004G058500 Sobic001G299200--Sobic003G323800 Sobic002G168400 Sobic002G168400 Sobic001G299200--Sobic002G168400 Sobic001G299200--Sobic002G235500 Sobic003G212300 Sobic003G212300 Sobic001G299200--Sobic003G212300 Sobic001G397850 Sobic001G397850 Sobic001G299200--Sobic001G397850 Sobic001G231400 Sobic001G231400 Sobic002G042100--Sobic001G231400 Sobic002G192000 Sobic002G192000 Sobic002G042100--Sobic002G192000 Sobic001G481100 Sobic001G481100 Sobic002G042100--Sobic001G481100 Sobic004G243100 Sobic004G243100 Sobic002G042100--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G042100--Sobic001G018300 Sobic001G367600 Sobic001G367600 Sobic002G042100--Sobic001G367600 Sobic002G251000 Sobic002G251000 Sobic002G042100--Sobic002G251000 Sobic001G079300 Sobic001G079300 Sobic002G042100--Sobic001G079300 Sobic006G075400 Sobic006G075400 Sobic002G042100--Sobic006G075400 Sobic001G299500--Sobic009G215400 Sobic001G299500--Sobic003G323800 Sobic001G477200 Sobic001G477200 Sobic001G299500--Sobic001G477200 Sobic001G299500--Sobic007G194400 Sobic004G202000 Sobic004G202000 Sobic001G299500--Sobic004G202000 Sobic001G299500--Sobic004G058500 Sobic001G299500--Sobic003G426300 Sobic001G299500--Sobic004G243000 Sobic003G169966 Sobic003G169966 Sobic001G299500--Sobic003G169966 Sobic002G377100--Sobic003G250600 Sobic001G059400 Sobic001G059400 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic003G102200 Sobic003G102200 Sobic002G377100--Sobic003G102200 Sobic001G195100 Sobic001G195100 Sobic002G377100--Sobic001G195100 Sobic010G163000 Sobic010G163000 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic004G297100 Sobic004G297100 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic005G101800 Sobic005G101800 Sobic003G426300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic003G426300--Sobic009G128700 Sobic010G084400 Sobic010G084400 Sobic003G426300--Sobic010G084400 Sobic003G426000 Sobic003G426000 Sobic003G426300--Sobic003G426000 Sobic003G426300--Sobic003G252800 Sobic001G063000 Sobic001G063000 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic007G227300 Sobic007G227300 Sobic003G426300--Sobic007G227300 Sobic001G400800 Sobic001G400800 Sobic003G426300--Sobic001G400800
Octagon: transcription factors


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