Gene annotation
Transcriptome id Sobic.007G148600.1
Synonym Sb07g022270, PPO, TOPP2
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5YLT7
Pfam PF16891 PF00149
Panther DB PTHR11668 PTHR11668:SF244
NCBI CDD KOG0374; Serine/threonine specific protein phosphatase PP1, catalytic subunit
KEGG Orthology K06269; serine/threonine-protein phosphatase PP1 catalytic subunit
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G59160 : type one serine/threonine protein phosphatase 2
RAP-DB (Rice) LOC_Os08g35440.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041612 , Zm00025a049916 , Zm00025a005759
Brachypodium KQK11962 , KQJ98548
Barley HORVU6Hr1G092900.1 , HORVU6Hr1G092760.8 , HORVU6Hr1G092760.2 , HORVU6Hr1G092760.3 , HORVU6Hr1G092760.1 , HORVU6Hr1G092760.6 , HORVU6Hr1G092760.7 , HORVU6Hr1G092760.4 , HORVU6Hr1G092760.5 , HORVU6Hr1G092770.1 , HORVU6Hr1G092770.2
Wheat TraesCS4A02G315000 , TraesCS6D02G388000 , TraesCS5B02G565000 , TraesCS6A02G404700 , TraesCS6B02G449000 , TraesCS5D02G549800
Populus -


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cDNA sequences
Sobic.007G148600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G071096 - -
2 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.009G177300 monocopper oxidase, putative, expressed -
4 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
5 Sobic.001G473700 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.003G178000 pectinesterase, putative, expressed -
8 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.001G226600 Beta amylase BAM (Os)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
10 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
11 Sobic.003G335700 ATCHX15, putative, expressed -
12 Sobic.002G066100 - -
13 Sobic.004G294200 ZOS2-13 - C2H2 zinc finger protein, expressed -
14 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
15 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
16 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
17 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
18 Sobic.003G061700 - -
19 Sobic.002G104801 - -
20 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -


Gene co-expression network
sample Sobic007G148600 Sobic007G148600 Sobic006G071096 Sobic006G071096 Sobic007G148600--Sobic006G071096 Sobic009G087200 Sobic009G087200 Sobic007G148600--Sobic009G087200 Sobic009G177300 Sobic009G177300 Sobic007G148600--Sobic009G177300 Sobic002G351500 Sobic002G351500 Sobic007G148600--Sobic002G351500 Sobic001G473700 Sobic001G473700 Sobic007G148600--Sobic001G473700 Sobic009G216400 Sobic009G216400 Sobic007G148600--Sobic009G216400 Sobic003G178000 Sobic003G178000 Sobic007G148600--Sobic003G178000 Sobic003G027300 Sobic003G027300 Sobic007G148600--Sobic003G027300 Sobic001G226600 Sobic001G226600 Sobic007G148600--Sobic001G226600 Sobic006G071096--Sobic001G473700 Sobic006G071096--Sobic009G177300 Sobic006G071096--Sobic003G027300 Sobic006G071096--Sobic009G087200 Sobic006G071096--Sobic009G216400 Sobic004G318300 Sobic004G318300 Sobic006G071096--Sobic004G318300 Sobic006G071096--Sobic002G351500 Sobic010G230200 Sobic010G230200 Sobic006G071096--Sobic010G230200 Sobic002G066100 Sobic002G066100 Sobic006G071096--Sobic002G066100 Sobic009G087200--Sobic003G027300 Sobic009G087200--Sobic004G318300 Sobic009G087200--Sobic001G473700 Sobic009G087200--Sobic010G230200 Sobic009G087200--Sobic006G071096 Sobic005G031700 Sobic005G031700 Sobic009G087200--Sobic005G031700 Sobic009G087200--Sobic009G177300 Sobic008G043400 Sobic008G043400 Sobic009G087200--Sobic008G043400 Sobic009G087200--Sobic009G216400 Sobic009G177300--Sobic002G351500 Sobic009G177300--Sobic009G216400 Sobic009G177300--Sobic006G071096 Sobic004G294200 Sobic004G294200 Sobic009G177300--Sobic004G294200 Sobic009G177300--Sobic003G178000 Sobic009G177300--Sobic002G066100 Sobic003G061700 Sobic003G061700 Sobic009G177300--Sobic003G061700 Sobic007G100800 Sobic007G100800 Sobic009G177300--Sobic007G100800 Sobic008G186900 Sobic008G186900 Sobic009G177300--Sobic008G186900 Sobic002G351500--Sobic009G177300 Sobic002G351500--Sobic003G061700 Sobic002G351500--Sobic007G100800 Sobic002G351500--Sobic009G216400 Sobic002G351500--Sobic008G186900 Sobic002G351500--Sobic003G178000 Sobic005G010000 Sobic005G010000 Sobic002G351500--Sobic005G010000 Sobic002G351500--Sobic004G294200 Sobic003G438500 Sobic003G438500 Sobic002G351500--Sobic003G438500 Sobic001G473700--Sobic006G071096 Sobic001G473700--Sobic009G087200 Sobic001G473700--Sobic003G027300 Sobic001G473700--Sobic009G177300 Sobic001G473700--Sobic004G318300 Sobic001G473700--Sobic009G216400 Sobic001G473700--Sobic010G230200 Sobic001G473700--Sobic002G351500 Sobic006G219700 Sobic006G219700 Sobic001G473700--Sobic006G219700 Sobic009G216400--Sobic009G177300 Sobic009G216400--Sobic002G351500 Sobic009G216400--Sobic008G186900 Sobic009G216400--Sobic003G061700 Sobic009G216400--Sobic007G100800 Sobic009G216400--Sobic003G438500 Sobic009G216400--Sobic005G010000 Sobic009G216400--Sobic003G178000 Sobic010G161400 Sobic010G161400 Sobic009G216400--Sobic010G161400 Sobic003G178000--Sobic002G351500 Sobic003G178000--Sobic003G061700 Sobic003G178000--Sobic008G186900 Sobic003G178000--Sobic007G100800 Sobic003G127200 Sobic003G127200 Sobic003G178000--Sobic003G127200 Sobic003G178000--Sobic004G294200 Sobic003G164700 Sobic003G164700 Sobic003G178000--Sobic003G164700 Sobic003G178000--Sobic009G216400 Sobic003G178000--Sobic009G177300 Sobic003G027300--Sobic004G318300 Sobic003G027300--Sobic010G230200 Sobic003G027300--Sobic009G087200 Sobic003G027300--Sobic008G043400 Sobic003G027300--Sobic005G031700 Sobic003G027300--Sobic006G071096 Sobic001G511100 Sobic001G511100 Sobic003G027300--Sobic001G511100 Sobic009G259600 Sobic009G259600 Sobic003G027300--Sobic009G259600 Sobic003G027300--Sobic006G219700 Sobic002G282600 Sobic002G282600 Sobic001G226600--Sobic002G282600 Sobic006G032000 Sobic006G032000 Sobic001G226600--Sobic006G032000 Sobic001G220800 Sobic001G220800 Sobic001G226600--Sobic001G220800 Sobic004G350400 Sobic004G350400 Sobic001G226600--Sobic004G350400 Sobic001G226600--Sobic003G438500 Sobic002G091300 Sobic002G091300 Sobic001G226600--Sobic002G091300 Sobic004G131400 Sobic004G131400 Sobic001G226600--Sobic004G131400 Sobic009G116100 Sobic009G116100 Sobic001G226600--Sobic009G116100 Sobic010G056500 Sobic010G056500 Sobic001G226600--Sobic010G056500
Octagon: transcription factors


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