Gene annotation
Transcriptome id Sobic.003G335700.1
Synonym CHX15, Sb03g038000, ATCHX15
Functional annotation ATCHX15, putative, expressed
UniProt C5XN83
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT2G13620 : cation/hydrogen exchanger 15
RAP-DB (Rice) LOC_Os01g60140.1 : ATCHX15, putative, expressed
MaizeGDB (Corn) Zm00025a044040 , Zm00025a039786 , Zm00025a037802
Brachypodium KQK10316 , PNT73109 , KQK12360 , KQK05704
Barley HORVU1Hr1G069170.2 , HORVU1Hr1G069170.3 , HORVU1Hr1G069170.1 , HORVU1Hr1G069170.6 , HORVU1Hr1G069170.7 , HORVU1Hr1G069170.4 , HORVU1Hr1G069170.5 , HORVU1Hr1G069170.8 , HORVU1Hr1G069170.9 , HORVU1Hr1G069170.10 , HORVU0Hr1G005680.2 , HORVU0Hr1G005680.1 , HORVU5Hr1G008270.1 , HORVU5Hr1G008270.2 , HORVU5Hr1G008270.3 , HORVU5Hr1G008270.4 , HORVU5Hr1G008270.5 , HORVU5Hr1G008270.6 , HORVU5Hr1G008270.7 , HORVU6Hr1G040290.1 , HORVU6Hr1G040290.3 , HORVU6Hr1G040290.2 , HORVU6Hr1G040290.4 , HORVU3Hr1G080390.5 , HORVU3Hr1G080390.4 , HORVU3Hr1G080390.1 , HORVU3Hr1G080390.3 , HORVU3Hr1G080390.2
Wheat TraesCS3D02G334000 , TraesCS3A02G340500 , TraesCS5A02G031600 , TraesCS2B02G551300 , TraesCS5D02G039800 , TraesCS2D02G523600 , TraesCS2A02G521800 , TraesCS5A02G031700 , TraesCS3B02G372100 , TraesCS1D02G303200 , TraesCS1D02G303200 , TraesCS1A02G303800 , TraesCS5D02G039900 , TraesCS1B02G314100 , TraesCS5B02G031800 , TraesCS4A02G368300 , TraesCS5A02G069100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -
2 Sobic.003G061700 - -
3 Sobic.005G010000 expressed protein -
4 Sobic.008G186900 SCP-like extracellular protein, expressed -
5 Sobic.004G251900 tetraspanin family protein, putative, expressed -
6 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
7 Sobic.003G178000 pectinesterase, putative, expressed -
8 Sobic.003G173800 polygalacturonase, putative, expressed -
9 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
10 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
11 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
12 Sobic.009G260900 expressed protein -
13 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.002G002600 la domain containing protein, expressed -
15 Sobic.002G106800 expressed protein -
16 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
17 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
18 Sobic.004G025500 - -
19 Sobic.008G028300 pollen allergen, putative, expressed -
20 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -


Gene co-expression network
sample Sobic003G335700 Sobic003G335700 Sobic007G100800 Sobic007G100800 Sobic003G335700--Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic003G335700--Sobic003G061700 Sobic005G010000 Sobic005G010000 Sobic003G335700--Sobic005G010000 Sobic008G186900 Sobic008G186900 Sobic003G335700--Sobic008G186900 Sobic004G251900 Sobic004G251900 Sobic003G335700--Sobic004G251900 Sobic003G127200 Sobic003G127200 Sobic003G335700--Sobic003G127200 Sobic003G178000 Sobic003G178000 Sobic003G335700--Sobic003G178000 Sobic003G173800 Sobic003G173800 Sobic003G335700--Sobic003G173800 Sobic010G161400 Sobic010G161400 Sobic003G335700--Sobic010G161400 Sobic007G100800--Sobic003G061700 Sobic007G100800--Sobic008G186900 Sobic007G100800--Sobic005G010000 Sobic007G100800--Sobic010G161400 Sobic007G100800--Sobic003G127200 Sobic007G100800--Sobic003G173800 Sobic002G002600 Sobic002G002600 Sobic007G100800--Sobic002G002600 Sobic009G098900 Sobic009G098900 Sobic007G100800--Sobic009G098900 Sobic008G028300 Sobic008G028300 Sobic007G100800--Sobic008G028300 Sobic003G061700--Sobic007G100800 Sobic003G061700--Sobic008G186900 Sobic003G061700--Sobic005G010000 Sobic003G061700--Sobic010G161400 Sobic003G061700--Sobic003G173800 Sobic003G061700--Sobic003G127200 Sobic003G061700--Sobic002G002600 Sobic002G351500 Sobic002G351500 Sobic003G061700--Sobic002G351500 Sobic003G061700--Sobic009G098900 Sobic005G010000--Sobic003G173800 Sobic002G106800 Sobic002G106800 Sobic005G010000--Sobic002G106800 Sobic005G010000--Sobic007G100800 Sobic005G010000--Sobic003G061700 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic004G137200 Sobic004G137200 Sobic005G010000--Sobic004G137200 Sobic002G091200 Sobic002G091200 Sobic005G010000--Sobic002G091200 Sobic008G186900--Sobic007G100800 Sobic008G186900--Sobic010G161400 Sobic008G186900--Sobic003G061700 Sobic008G186900--Sobic005G010000 Sobic008G186900--Sobic003G173800 Sobic008G186900--Sobic002G002600 Sobic008G186900--Sobic003G127200 Sobic008G186900--Sobic009G098900 Sobic008G186900--Sobic008G028300 Sobic004G025500 Sobic004G025500 Sobic004G251900--Sobic004G025500 Sobic004G251900--Sobic009G098900 Sobic009G089532 Sobic009G089532 Sobic004G251900--Sobic009G089532 Sobic001G539700 Sobic001G539700 Sobic004G251900--Sobic001G539700 Sobic004G251900--Sobic004G137200 Sobic004G251900--Sobic002G002600 Sobic008G028100 Sobic008G028100 Sobic004G251900--Sobic008G028100 Sobic002G283000 Sobic002G283000 Sobic004G251900--Sobic002G283000 Sobic004G251900--Sobic003G173800 Sobic003G127200--Sobic002G002600 Sobic003G127200--Sobic007G100800 Sobic003G127200--Sobic008G028300 Sobic009G260900 Sobic009G260900 Sobic003G127200--Sobic009G260900 Sobic003G127200--Sobic008G186900 Sobic003G127200--Sobic010G161400 Sobic003G127200--Sobic003G061700 Sobic001G002200 Sobic001G002200 Sobic003G127200--Sobic001G002200 Sobic003G127200--Sobic001G539700 Sobic003G178000--Sobic002G351500 Sobic003G178000--Sobic003G061700 Sobic003G178000--Sobic008G186900 Sobic003G178000--Sobic007G100800 Sobic003G178000--Sobic003G127200 Sobic004G294200 Sobic004G294200 Sobic003G178000--Sobic004G294200 Sobic003G164700 Sobic003G164700 Sobic003G178000--Sobic003G164700 Sobic009G216400 Sobic009G216400 Sobic003G178000--Sobic009G216400 Sobic009G177300 Sobic009G177300 Sobic003G178000--Sobic009G177300 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic003G173800--Sobic007G100800 Sobic003G173800--Sobic003G061700 Sobic010G161400--Sobic008G186900 Sobic010G161400--Sobic009G098900 Sobic010G161400--Sobic003G173800 Sobic010G161400--Sobic002G002600 Sobic010G161400--Sobic007G100800 Sobic010G161400--Sobic005G010000 Sobic010G161400--Sobic008G028300 Sobic010G161400--Sobic003G061700 Sobic010G161400--Sobic002G106800
Octagon: transcription factors


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