Gene annotation
Transcriptome id Sobic.008G020100.2
Synonym AtENODL18, Sb08g001780, ENODL18
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt A0A1B6PB07
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT1G08500 : early nodulin-like protein 18
RAP-DB (Rice) LOC_Os12g26880.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033890
Brachypodium KQJ86800
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G020100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
2 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
3 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
4 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
5 Sobic.010G271300 carrier, putative, expressed -
6 Sobic.004G319100 expressed protein -
7 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
10 Sobic.001G238400 expansin precursor, putative, expressed -
11 Sobic.006G234800 expressed protein -
12 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
13 Sobic.008G005000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
14 Sobic.001G481000 expressed protein -
15 Sobic.003G016100 expressed protein -
16 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
17 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
18 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
19 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
20 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic008G020100 Sobic008G020100 Sobic006G132900 Sobic006G132900 Sobic008G020100--Sobic006G132900 Sobic001G433900 Sobic001G433900 Sobic008G020100--Sobic001G433900 Sobic004G318700 Sobic004G318700 Sobic008G020100--Sobic004G318700 Sobic009G106400 Sobic009G106400 Sobic008G020100--Sobic009G106400 Sobic010G271300 Sobic010G271300 Sobic008G020100--Sobic010G271300 Sobic004G319100 Sobic004G319100 Sobic008G020100--Sobic004G319100 Sobic009G088900 Sobic009G088900 Sobic008G020100--Sobic009G088900 Sobic007G169900 Sobic007G169900 Sobic008G020100--Sobic007G169900 Sobic009G188000 Sobic009G188000 Sobic008G020100--Sobic009G188000 Sobic001G502400 Sobic001G502400 Sobic006G132900--Sobic001G502400 Sobic006G234800 Sobic006G234800 Sobic006G132900--Sobic006G234800 Sobic005G107900 Sobic005G107900 Sobic006G132900--Sobic005G107900 Sobic001G313600 Sobic001G313600 Sobic006G132900--Sobic001G313600 Sobic002G188900 Sobic002G188900 Sobic006G132900--Sobic002G188900 Sobic001G304100 Sobic001G304100 Sobic006G132900--Sobic001G304100 Sobic001G435000 Sobic001G435000 Sobic006G132900--Sobic001G435000 Sobic004G229800 Sobic004G229800 Sobic006G132900--Sobic004G229800 Sobic001G238400 Sobic001G238400 Sobic006G132900--Sobic001G238400 Sobic001G433900--Sobic006G132900 Sobic010G259500 Sobic010G259500 Sobic001G433900--Sobic010G259500 Sobic010G066700 Sobic010G066700 Sobic001G433900--Sobic010G066700 Sobic003G319700 Sobic003G319700 Sobic001G433900--Sobic003G319700 Sobic010G088700 Sobic010G088700 Sobic001G433900--Sobic010G088700 Sobic002G034800 Sobic002G034800 Sobic001G433900--Sobic002G034800 Sobic001G449600 Sobic001G449600 Sobic001G433900--Sobic001G449600 Sobic003G364000 Sobic003G364000 Sobic001G433900--Sobic003G364000 Sobic003G301600 Sobic003G301600 Sobic001G433900--Sobic003G301600 Sobic001G416200 Sobic001G416200 Sobic004G318700--Sobic001G416200 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic001G161500 Sobic001G161500 Sobic004G318700--Sobic001G161500 Sobic002G213600 Sobic002G213600 Sobic004G318700--Sobic002G213600 Sobic004G318700--Sobic009G188000 Sobic001G237900 Sobic001G237900 Sobic004G318700--Sobic001G237900 Sobic004G349125 Sobic004G349125 Sobic004G318700--Sobic004G349125 Sobic004G202400 Sobic004G202400 Sobic004G318700--Sobic004G202400 Sobic001G238800 Sobic001G238800 Sobic009G106400--Sobic001G238800 Sobic003G360600 Sobic003G360600 Sobic009G106400--Sobic003G360600 Sobic010G106500 Sobic010G106500 Sobic009G106400--Sobic010G106500 Sobic009G106400--Sobic007G169900 Sobic009G106400--Sobic004G349125 Sobic009G106400--Sobic001G416200 Sobic009G106400--Sobic004G318700 Sobic002G416900 Sobic002G416900 Sobic009G106400--Sobic002G416900 Sobic009G106400--Sobic001G161500 Sobic005G067500 Sobic005G067500 Sobic010G271300--Sobic005G067500 Sobic009G109000 Sobic009G109000 Sobic010G271300--Sobic009G109000 Sobic010G271300--Sobic004G318700 Sobic010G271300--Sobic001G238800 Sobic003G093700 Sobic003G093700 Sobic010G271300--Sobic003G093700 Sobic010G271300--Sobic009G188000 Sobic010G271300--Sobic002G213600 Sobic002G124500 Sobic002G124500 Sobic010G271300--Sobic002G124500 Sobic010G271300--Sobic010G106500 Sobic007G030400 Sobic007G030400 Sobic004G319100--Sobic007G030400 Sobic004G319100--Sobic001G238400 Sobic004G319100--Sobic006G132900 Sobic005G213500 Sobic005G213500 Sobic004G319100--Sobic005G213500 Sobic007G039600 Sobic007G039600 Sobic004G319100--Sobic007G039600 Sobic004G319100--Sobic004G318700 Sobic002G183600 Sobic002G183600 Sobic004G319100--Sobic002G183600 Sobic004G319100--Sobic008G020100 Sobic004G319100--Sobic010G259500 Sobic008G055100 Sobic008G055100 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic009G088900--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic001G231700 Sobic001G231700 Sobic007G169900--Sobic001G231700 Sobic007G169900--Sobic004G349125 Sobic006G199800 Sobic006G199800 Sobic007G169900--Sobic006G199800 Sobic010G067400 Sobic010G067400 Sobic007G169900--Sobic010G067400 Sobic007G169900--Sobic009G106400 Sobic003G084400 Sobic003G084400 Sobic007G169900--Sobic003G084400 Sobic010G184800 Sobic010G184800 Sobic007G169900--Sobic010G184800 Sobic001G476500 Sobic001G476500 Sobic007G169900--Sobic001G476500 Sobic004G046200 Sobic004G046200 Sobic007G169900--Sobic004G046200 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic009G188000--Sobic005G107900 Sobic009G188000--Sobic001G502400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200
Octagon: transcription factors


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