Gene annotation
Transcriptome id Sobic.008G025100.1
Synonym Sb08g002190
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt Q84YD9
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38640 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os12g02720.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029005 , Zm00025a033325 , Zm00025a028729
Brachypodium KQK10317 , KQJ92516 , KQK05705
Barley HORVU3Hr1G080430.1 , HORVU5Hr1G046200.1 , HORVU4Hr1G047270.1 , HORVU1Hr1G069180.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G217600 Flavonol sulfotransferase-like protein (Os)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
2 Sobic.002G358300 expressed protein -
3 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
4 Sobic.004G191300 - -
5 Sobic.007G122800 expressed protein -
6 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
7 Sobic.007G074800 O-methyltransferase, putative, expressed -
8 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
9 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
10 Sobic.009G122400 expressed protein -
11 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
12 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.008G066401 - -
14 Sobic.006G234850 - -
15 Sobic.004G294400 expansin precursor, putative, expressed -
16 Sobic.001G195200 cytochrome P450, putative, expressed -
17 Sobic.004G308900 AP2 domain containing protein, expressed -
18 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
19 Sobic.004G191400 - -
20 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic008G025100 Sobic008G025100 Sobic005G217600 Sobic005G217600 Sobic008G025100--Sobic005G217600 Sobic002G358300 Sobic002G358300 Sobic008G025100--Sobic002G358300 Sobic001G363400 Sobic001G363400 Sobic008G025100--Sobic001G363400 Sobic004G191300 Sobic004G191300 Sobic008G025100--Sobic004G191300 Sobic007G122800 Sobic007G122800 Sobic008G025100--Sobic007G122800 Sobic001G330400 Sobic001G330400 Sobic008G025100--Sobic001G330400 Sobic007G074800 Sobic007G074800 Sobic008G025100--Sobic007G074800 Sobic001G330200 Sobic001G330200 Sobic008G025100--Sobic001G330200 Sobic001G259400 Sobic001G259400 Sobic008G025100--Sobic001G259400 Sobic009G224100 Sobic009G224100 Sobic005G217600--Sobic009G224100 Sobic001G330100 Sobic001G330100 Sobic005G217600--Sobic001G330100 Sobic009G144700 Sobic009G144700 Sobic005G217600--Sobic009G144700 Sobic005G217600--Sobic001G330200 Sobic002G388900 Sobic002G388900 Sobic005G217600--Sobic002G388900 Sobic002G251000 Sobic002G251000 Sobic005G217600--Sobic002G251000 Sobic004G108200 Sobic004G108200 Sobic005G217600--Sobic004G108200 Sobic001G256700 Sobic001G256700 Sobic005G217600--Sobic001G256700 Sobic003G323201 Sobic003G323201 Sobic005G217600--Sobic003G323201 Sobic004G308900 Sobic004G308900 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic002G358300--Sobic001G195200 Sobic009G032000 Sobic009G032000 Sobic002G358300--Sobic009G032000 Sobic004G191400 Sobic004G191400 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G395300 Sobic002G395300 Sobic002G358300--Sobic002G395300 Sobic004G294400 Sobic004G294400 Sobic002G358300--Sobic004G294400 Sobic002G184300 Sobic002G184300 Sobic001G363400--Sobic002G184300 Sobic001G363400--Sobic001G330200 Sobic005G013500 Sobic005G013500 Sobic001G363400--Sobic005G013500 Sobic001G363400--Sobic009G032000 Sobic001G363400--Sobic001G330100 Sobic001G363400--Sobic002G358300 Sobic001G363400--Sobic009G144700 Sobic001G363400--Sobic001G330400 Sobic004G246600 Sobic004G246600 Sobic001G363400--Sobic004G246600 Sobic004G191300--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G191300--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic004G191300--Sobic001G079300 Sobic010G209200 Sobic010G209200 Sobic004G191300--Sobic010G209200 Sobic004G191300--Sobic007G122800 Sobic004G191300--Sobic004G294400 Sobic004G191300--Sobic004G308900 Sobic004G191300--Sobic002G358300 Sobic004G191300--Sobic001G195200 Sobic007G122800--Sobic002G358300 Sobic007G122800--Sobic004G308900 Sobic007G122800--Sobic004G191400 Sobic007G122800--Sobic004G294400 Sobic007G122800--Sobic004G191300 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic001G330400--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic001G330400--Sobic006G075400 Sobic004G219800 Sobic004G219800 Sobic001G330400--Sobic004G219800 Sobic007G017500 Sobic007G017500 Sobic001G330400--Sobic007G017500 Sobic001G330400--Sobic009G122400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330400--Sobic001G330100 Sobic002G322600 Sobic002G322600 Sobic007G074800--Sobic002G322600 Sobic007G074800--Sobic005G217600 Sobic003G346901 Sobic003G346901 Sobic007G074800--Sobic003G346901 Sobic010G085500 Sobic010G085500 Sobic007G074800--Sobic010G085500 Sobic001G349100 Sobic001G349100 Sobic007G074800--Sobic001G349100 Sobic010G064000 Sobic010G064000 Sobic007G074800--Sobic010G064000 Sobic008G014000 Sobic008G014000 Sobic007G074800--Sobic008G014000 Sobic001G502400 Sobic001G502400 Sobic007G074800--Sobic001G502400 Sobic001G313600 Sobic001G313600 Sobic007G074800--Sobic001G313600 Sobic001G330200--Sobic001G330100 Sobic001G330200--Sobic009G144700 Sobic001G330200--Sobic001G363400 Sobic001G330200--Sobic001G330400 Sobic001G330200--Sobic002G388900 Sobic001G330200--Sobic004G294400 Sobic001G330200--Sobic002G395300 Sobic001G330200--Sobic004G219800 Sobic001G330200--Sobic009G032000 Sobic002G012500 Sobic002G012500 Sobic001G259400--Sobic002G012500 Sobic001G259400--Sobic006G007900 Sobic008G066401 Sobic008G066401 Sobic001G259400--Sobic008G066401 Sobic005G086600 Sobic005G086600 Sobic001G259400--Sobic005G086600 Sobic004G064500 Sobic004G064500 Sobic001G259400--Sobic004G064500 Sobic003G079200 Sobic003G079200 Sobic001G259400--Sobic003G079200 Sobic008G066200 Sobic008G066200 Sobic001G259400--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic001G259400--Sobic006G008000 Sobic008G158600 Sobic008G158600 Sobic001G259400--Sobic008G158600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.