Gene annotation
Transcriptome id Sobic.008G026400.1
Synonym Sb08g002300
Functional annotation expressed protein
UniProt Q84YF3
Pfam PF06697
Panther DB PTHR33512 PTHR33512:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08600 : Protein of unknown function (DUF1191)
RAP-DB (Rice) LOC_Os11g02630.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G214900 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
4 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
5 Sobic.005G143100 expressed protein -
6 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
7 Sobic.003G217500 expressed protein -
8 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
9 Sobic.010G212700 tetraspanin family protein, putative, expressed -
10 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
11 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
12 Sobic.002G341700 expressed protein -
13 Sobic.001G171100 expressed protein -
14 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
15 Sobic.006G093200 PHD finger protein, putative, expressed -
16 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
17 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
18 Sobic.001G465500 radical SAM enzyme, putative, expressed -
19 Sobic.006G160200 MSP domain containing protein, expressed -
20 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G026400 Sobic008G026400 Sobic003G240100 Sobic003G240100 Sobic008G026400--Sobic003G240100 Sobic003G214900 Sobic003G214900 Sobic008G026400--Sobic003G214900 Sobic002G006100 Sobic002G006100 Sobic008G026400--Sobic002G006100 Sobic009G254000 Sobic009G254000 Sobic008G026400--Sobic009G254000 Sobic005G143100 Sobic005G143100 Sobic008G026400--Sobic005G143100 Sobic001G123100 Sobic001G123100 Sobic008G026400--Sobic001G123100 Sobic003G217500 Sobic003G217500 Sobic008G026400--Sobic003G217500 Sobic004G145300 Sobic004G145300 Sobic008G026400--Sobic004G145300 Sobic010G212700 Sobic010G212700 Sobic008G026400--Sobic010G212700 Sobic002G253900 Sobic002G253900 Sobic003G240100--Sobic002G253900 Sobic003G240100--Sobic002G006100 Sobic001G382400 Sobic001G382400 Sobic003G240100--Sobic001G382400 Sobic003G240100--Sobic003G217500 Sobic003G240100--Sobic001G123100 Sobic001G369800 Sobic001G369800 Sobic003G240100--Sobic001G369800 Sobic003G240100--Sobic008G026400 Sobic003G240100--Sobic009G254000 Sobic003G240100--Sobic004G145300 Sobic003G214900--Sobic008G026400 Sobic003G214900--Sobic005G143100 Sobic003G214900--Sobic002G253900 Sobic003G214900--Sobic001G123100 Sobic003G214900--Sobic003G240100 Sobic003G214900--Sobic009G254000 Sobic003G220500 Sobic003G220500 Sobic003G214900--Sobic003G220500 Sobic002G396800 Sobic002G396800 Sobic003G214900--Sobic002G396800 Sobic003G100700 Sobic003G100700 Sobic003G214900--Sobic003G100700 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic005G143100--Sobic002G284100 Sobic009G172950 Sobic009G172950 Sobic005G143100--Sobic009G172950 Sobic005G143100--Sobic001G123100 Sobic004G321400 Sobic004G321400 Sobic005G143100--Sobic004G321400 Sobic005G143100--Sobic002G006100 Sobic004G267600 Sobic004G267600 Sobic005G143100--Sobic004G267600 Sobic003G289800 Sobic003G289800 Sobic005G143100--Sobic003G289800 Sobic003G226700 Sobic003G226700 Sobic005G143100--Sobic003G226700 Sobic006G142500 Sobic006G142500 Sobic005G143100--Sobic006G142500 Sobic001G123100--Sobic002G284100 Sobic001G123100--Sobic002G253900 Sobic001G123100--Sobic001G369800 Sobic001G123100--Sobic005G143100 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic001G123100--Sobic002G006100 Sobic001G123100--Sobic003G224700 Sobic003G217500--Sobic004G250600 Sobic006G200901 Sobic006G200901 Sobic003G217500--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic003G217500--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic003G217500--Sobic002G343000 Sobic009G148000 Sobic009G148000 Sobic003G217500--Sobic009G148000 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic003G217500--Sobic006G186300 Sobic004G145300--Sobic001G123100 Sobic004G145300--Sobic001G369800 Sobic004G145300--Sobic001G123300 Sobic004G145300--Sobic003G224700 Sobic004G145300--Sobic002G284100 Sobic002G335500 Sobic002G335500 Sobic004G145300--Sobic002G335500 Sobic004G145300--Sobic002G006100 Sobic001G171100 Sobic001G171100 Sobic004G145300--Sobic001G171100 Sobic004G145300--Sobic006G200901 Sobic010G212700--Sobic001G171100 Sobic001G468000 Sobic001G468000 Sobic010G212700--Sobic001G468000 Sobic003G022900 Sobic003G022900 Sobic010G212700--Sobic003G022900 Sobic006G066400 Sobic006G066400 Sobic010G212700--Sobic006G066400 Sobic010G180200 Sobic010G180200 Sobic010G212700--Sobic010G180200 Sobic002G196500 Sobic002G196500 Sobic010G212700--Sobic002G196500 Sobic004G218000 Sobic004G218000 Sobic010G212700--Sobic004G218000 Sobic002G374200 Sobic002G374200 Sobic010G212700--Sobic002G374200 Sobic010G212700--Sobic004G014100
Octagon: transcription factors


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