Gene annotation
Transcriptome id Sobic.008G046900.1
Synonym Sb08g003963
Functional annotation ubiquinol-cytochrome C reductase hinge protein, putative, expressed
UniProt C5YS99
Pfam PF02320
Panther DB PTHR15336 PTHR15336:SF2
NCBI CDD KOG4763; Ubiquinol-cytochrome c reductase hinge protein
KEGG Orthology K00416; QCR6, ubiquinol-cytochrome c reductase subunit 6
Gene Ontology GO:0008121; ubiquinol-cytochrome-c reductase activity GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c


Orthologs (automatic annotation)
TAIR AT1G15120 : Ubiquinol-cytochrome C reductase hinge protein
RAP-DB (Rice) LOC_Os11g06340.1 : ubiquinol-cytochrome C reductase hinge protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.008G046900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
2 Sobic.009G212200 expressed protein -
3 Sobic.006G083500 SLL1 protein, putative, expressed -
4 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
5 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
6 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
7 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
8 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
9 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
10 Sobic.010G012500 ATOZI1, putative, expressed -
11 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
12 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
13 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
14 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.005G110800 - -
16 Sobic.002G398901 - -
17 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
18 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
19 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
20 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7


Gene co-expression network
sample Sobic008G046900 Sobic008G046900 Sobic003G215700 Sobic003G215700 Sobic008G046900--Sobic003G215700 Sobic009G212200 Sobic009G212200 Sobic008G046900--Sobic009G212200 Sobic006G083500 Sobic006G083500 Sobic008G046900--Sobic006G083500 Sobic004G220000 Sobic004G220000 Sobic008G046900--Sobic004G220000 Sobic002G356400 Sobic002G356400 Sobic008G046900--Sobic002G356400 Sobic004G211833 Sobic004G211833 Sobic008G046900--Sobic004G211833 Sobic003G209000 Sobic003G209000 Sobic008G046900--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic008G046900--Sobic002G418400 Sobic009G176000 Sobic009G176000 Sobic008G046900--Sobic009G176000 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic001G047800 Sobic001G047800 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic003G215700--Sobic004G211833 Sobic001G404800 Sobic001G404800 Sobic003G215700--Sobic001G404800 Sobic004G060500 Sobic004G060500 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic001G286200 Sobic001G286200 Sobic009G212200--Sobic001G286200 Sobic009G212200--Sobic003G215700 Sobic001G304400 Sobic001G304400 Sobic009G212200--Sobic001G304400 Sobic003G443300 Sobic003G443300 Sobic009G212200--Sobic003G443300 Sobic009G212200--Sobic002G356400 Sobic010G264300 Sobic010G264300 Sobic009G212200--Sobic010G264300 Sobic009G212200--Sobic001G134400 Sobic003G249700 Sobic003G249700 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic006G083500--Sobic009G176000 Sobic002G398901 Sobic002G398901 Sobic006G083500--Sobic002G398901 Sobic006G083500--Sobic003G209000 Sobic007G051000 Sobic007G051000 Sobic006G083500--Sobic007G051000 Sobic006G083500--Sobic001G134400 Sobic005G113300 Sobic005G113300 Sobic004G220000--Sobic005G113300 Sobic004G220000--Sobic004G211833 Sobic004G220000--Sobic010G012500 Sobic004G220000--Sobic002G398901 Sobic001G295200 Sobic001G295200 Sobic004G220000--Sobic001G295200 Sobic004G220000--Sobic006G083500 Sobic009G188000 Sobic009G188000 Sobic004G220000--Sobic009G188000 Sobic001G361600 Sobic001G361600 Sobic004G220000--Sobic001G361600 Sobic001G130301 Sobic001G130301 Sobic004G220000--Sobic001G130301 Sobic002G309700 Sobic002G309700 Sobic002G356400--Sobic002G309700 Sobic001G465800 Sobic001G465800 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic001G350600 Sobic001G350600 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic004G260200 Sobic004G260200 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic002G356400--Sobic003G209000 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic002G190900 Sobic002G190900 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic003G209000--Sobic006G083500 Sobic003G209000--Sobic003G215700 Sobic003G209000--Sobic007G051000 Sobic003G209000--Sobic009G119900 Sobic003G209000--Sobic002G398901 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.